RNA–Protein interactions for RNA: ENST00000463233.1

TRABD-205, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 2,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-205ENST00000463233 PCF11O94913 1555 aaKnown RBP30.43■■■□□ 2.46
TRABD-205ENST00000463233 MAP3K1Q13233 1512 aa30.43■■■□□ 2.46
TRABD-205ENST00000463233 FHOD3Q2V2M9 1422 aa30.43■■■□□ 2.46
TRABD-205ENST00000463233 FHAD1B1AJZ9 1412 aa30.4■■■□□ 2.46
TRABD-205ENST00000463233 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
TRABD-205ENST00000463233 TARBP1Q13395 1621 aaKnown RBP30.38■■■□□ 2.45
TRABD-205ENST00000463233 EFCAB5A4FU69 1503 aa30.37■■■□□ 2.45
TRABD-205ENST00000463233 LRRC9Q6ZRR7 1453 aa30.36■■■□□ 2.45
TRABD-205ENST00000463233 CFAP43Q8NDM7 1665 aa30.33■■■□□ 2.45
TRABD-205ENST00000463233 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
TRABD-205ENST00000463233 DHX57Q6P158 1386 aaKnown RBP30.27■■■□□ 2.44
TRABD-205ENST00000463233 FYCO1Q9BQS8 1478 aa30.25■■■□□ 2.43
TRABD-205ENST00000463233 PHLDB1Q86UU1 1377 aa30.25■■■□□ 2.43
TRABD-205ENST00000463233 MRC2Q9UBG0 1479 aa30.24■■■□□ 2.43
TRABD-205ENST00000463233 ITGAEP38570 1179 aa30.23■■■□□ 2.43
TRABD-205ENST00000463233 CASKIN1Q8WXD9 1431 aa30.23■■■□□ 2.43
TRABD-205ENST00000463233 DIEXFQ68CQ4 756 aaKnown RBP30.22■■■□□ 2.43
TRABD-205ENST00000463233 AQRO60306 1485 aaKnown RBP eCLIP30.2■■■□□ 2.435e-7■■■■■ 29.5
TRABD-205ENST00000463233 SAMD9Q5K651 1589 aa30.19■■■□□ 2.42
TRABD-205ENST00000463233 PBRM1Q86U86 1689 aa30.19■■■□□ 2.42
TRABD-205ENST00000463233 ZNF316A6NFI3 1004 aaPredicted RBP30.16■■■□□ 2.42
TRABD-205ENST00000463233 SNAPC4Q5SXM2 1469 aa30.16■■■□□ 2.42
TRABD-205ENST00000463233 FMN1Q68DA7 1419 aa30.15■■■□□ 2.42
TRABD-205ENST00000463233 CLSPNQ9HAW4 1339 aa30.1■■■□□ 2.41
TRABD-205ENST00000463233 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
TRABD-205ENST00000463233 LRRIQ1Q96JM4 1722 aa30.06■■■□□ 2.4
TRABD-205ENST00000463233 FAM50AQ14320 339 aaKnown RBP30.03■■■□□ 2.4
TRABD-205ENST00000463233 ZNF608Q9ULD9 1512 aaPredicted RBP30.03■■■□□ 2.4
TRABD-205ENST00000463233 WDR62O43379 1518 aa30.03■■■□□ 2.4
TRABD-205ENST00000463233 RAB3GAP2Q9H2M9 1393 aa30.02■■■□□ 2.4
TRABD-205ENST00000463233 GRIN2BQ13224 1484 aa30■■■□□ 2.39
TRABD-205ENST00000463233 IFT140Q96RY7 1462 aa29.98■■■□□ 2.39
TRABD-205ENST00000463233 IQGAP2Q13576 1575 aa29.94■■■□□ 2.38
TRABD-205ENST00000463233 SETD5Q9C0A6 1442 aa29.92■■■□□ 2.38
TRABD-205ENST00000463233 MTUS2Q5JR59 1369 aa29.92■■■□□ 2.38
TRABD-205ENST00000463233 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
TRABD-205ENST00000463233 MAPKBP1O60336 1514 aa29.87■■■□□ 2.37
TRABD-205ENST00000463233 FGD6Q6ZV73 1430 aa29.86■■■□□ 2.37
TRABD-205ENST00000463233 ERCC6Q03468 1493 aa29.85■■■□□ 2.37
TRABD-205ENST00000463233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.83■■■□□ 2.373e-6■■■■□ 26.4
TRABD-205ENST00000463233 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
TRABD-205ENST00000463233 NCOA2Q15596 1464 aa29.81■■■□□ 2.36
TRABD-205ENST00000463233 MAGI3Q5TCQ9 1506 aa29.8■■■□□ 2.36
TRABD-205ENST00000463233 EHBP1L1Q8N3D4 1523 aa29.78■■■□□ 2.36
TRABD-205ENST00000463233 SUPT6HQ7KZ85 1726 aaKnown RBP29.76■■■□□ 2.36
TRABD-205ENST00000463233 UGGT2Q9NYU1 1516 aa29.76■■■□□ 2.35
TRABD-205ENST00000463233 HECW1Q76N89 1606 aa29.74■■■□□ 2.35
TRABD-205ENST00000463233 CCDC18Q5T9S5 1454 aa29.73■■■□□ 2.35
TRABD-205ENST00000463233 MYOM3Q5VTT5 1437 aa29.73■■■□□ 2.35
TRABD-205ENST00000463233 PTPRKQ15262 1439 aa29.71■■■□□ 2.35
TRABD-205ENST00000463233 GRIN2AQ12879 1464 aa29.7■■■□□ 2.35
TRABD-205ENST00000463233 ARHGEF11O15085 1522 aa29.69■■■□□ 2.34
TRABD-205ENST00000463233 SCAF1Q9H7N4 1312 aaKnown RBP29.69■■■□□ 2.34
TRABD-205ENST00000463233 EPRSP07814 1512 aaKnown RBP29.69■■■□□ 2.34
TRABD-205ENST00000463233 KIAA0586Q9BVV6 1533 aa29.69■■■□□ 2.34
TRABD-205ENST00000463233 CDK13Q14004 1512 aaKnown RBP29.68■■■□□ 2.34
TRABD-205ENST00000463233 MIER1Q8N108 512 aa29.67■■■□□ 2.34
TRABD-205ENST00000463233 DISP1Q96F81 1524 aa29.66■■■□□ 2.34
TRABD-205ENST00000463233 KIAA0556O60303 1618 aa29.64■■■□□ 2.34
TRABD-205ENST00000463233 NEUROD1Q13562 356 aa29.64■■■□□ 2.34
TRABD-205ENST00000463233 ARID3CA6NKF2 412 aa29.63■■■□□ 2.33
TRABD-205ENST00000463233 PTPN23Q9H3S7 1636 aa29.62■■■□□ 2.33
TRABD-205ENST00000463233 ACIN1Q9UKV3 1341 aaKnown RBP29.6■■■□□ 2.33
TRABD-205ENST00000463233 SIN3AQ96ST3 1273 aa29.6■■■□□ 2.33
TRABD-205ENST00000463233 PELP1Q8IZL8 1130 aaKnown RBP29.59■■■□□ 2.33
TRABD-205ENST00000463233 MAGI1Q96QZ7 1491 aaPredicted RBP29.59■■■□□ 2.33
TRABD-205ENST00000463233 HFM1A2PYH4 1435 aa29.57■■■□□ 2.32
TRABD-205ENST00000463233 CEP170Q5SW79 1584 aa29.55■■■□□ 2.32
TRABD-205ENST00000463233 SYNJ2O15056 1496 aa29.53■■■□□ 2.32
TRABD-205ENST00000463233 CHMP7Q8WUX9 453 aaPredicted RBP29.51■■■□□ 2.31
TRABD-205ENST00000463233 NAIPQ13075 1403 aa29.51■■■□□ 2.31
TRABD-205ENST00000463233 TCOF1Q13428 1488 aaKnown RBP29.5■■■□□ 2.31
TRABD-205ENST00000463233 NUP153P49790 1475 aaKnown RBP29.48■■■□□ 2.31
TRABD-205ENST00000463233 CENPBP07199 599 aaPredicted RBP29.47■■■□□ 2.31
TRABD-205ENST00000463233 FBLN2P98095 1184 aa29.47■■■□□ 2.31
TRABD-205ENST00000463233 RAPGEF6Q8TEU7 1601 aa29.46■■■□□ 2.31
TRABD-205ENST00000463233 YTHDC1Q96MU7 727 aaKnown RBP29.44■■■□□ 2.3
TRABD-205ENST00000463233 UACAQ9BZF9 1416 aa29.43■■■□□ 2.3
TRABD-205ENST00000463233 CHIC2Q9UKJ5 165 aa29.39■■■□□ 2.3
TRABD-205ENST00000463233 NUP160Q12769 1436 aa29.39■■■□□ 2.3
TRABD-205ENST00000463233 MIA2Q96PC5 1412 aa29.39■■■□□ 2.3
TRABD-205ENST00000463233 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
TRABD-205ENST00000463233 PLB1Q6P1J6 1458 aa29.35■■■□□ 2.29
TRABD-205ENST00000463233 GCC2Q8IWJ2 1684 aa29.34■■■□□ 2.29
TRABD-205ENST00000463233 TIMELESSQ9UNS1 1208 aa29.32■■■□□ 2.28
TRABD-205ENST00000463233 KDM6BO15054 1643 aa29.3■■■□□ 2.28
TRABD-205ENST00000463233 JPH4Q96JJ6 628 aa29.3■■■□□ 2.28
TRABD-205ENST00000463233 PRG4Q92954 1404 aaPredicted RBP29.27■■■□□ 2.28
TRABD-205ENST00000463233 AKNAQ7Z591 1439 aa29.26■■■□□ 2.27
TRABD-205ENST00000463233 PPP1R15AO75807 674 aaPredicted RBP29.26■■■□□ 2.27
TRABD-205ENST00000463233 CARMIL2Q6F5E8 1435 aa29.25■■■□□ 2.27
TRABD-205ENST00000463233 ZNF644Q9H582 1327 aaPredicted RBP29.24■■■□□ 2.27
TRABD-205ENST00000463233 GTF3C3Q9Y5Q9 886 aa29.23■■■□□ 2.27
TRABD-205ENST00000463233 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
TRABD-205ENST00000463233 DENND4BO75064 1496 aaPredicted RBP29.21■■■□□ 2.27
TRABD-205ENST00000463233 TROQ12816 1431 aaPredicted RBP29.21■■■□□ 2.27
TRABD-205ENST00000463233 DAPK1P53355 1430 aa29.2■■■□□ 2.27
TRABD-205ENST00000463233 TONSLQ96HA7 1378 aa29.2■■■□□ 2.26
TRABD-205ENST00000463233 DNMT1P26358 1616 aaKnown RBP29.19■■■□□ 2.26
TRABD-205ENST00000463233 ABCC5O15440 1437 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms