RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 PRG4Q92954 1404 aaPredicted RBP33.96■■■■□ 3.03
MSH5-210ENST00000463094 CARMIL1Q5VZK9 1371 aa33.94■■■■□ 3.02
MSH5-210ENST00000463094 RUSC2Q8N2Y8 1516 aa33.93■■■■□ 3.02
MSH5-210ENST00000463094 KIAA0586Q9BVV6 1533 aa33.87■■■■□ 3.01
MSH5-210ENST00000463094 RAPGEF2Q9Y4G8 1499 aa33.69■■■□□ 2.98
MSH5-210ENST00000463094 NPM1P06748 294 aaKnown RBP eCLIP33.66■■■□□ 2.98
MSH5-210ENST00000463094 CARMIL2Q6F5E8 1435 aa33.63■■■□□ 2.97
MSH5-210ENST00000463094 IQGAP2Q13576 1575 aa33.61■■■□□ 2.97
MSH5-210ENST00000463094 TTBK1Q5TCY1 1321 aaPredicted RBP33.54■■■□□ 2.96
MSH5-210ENST00000463094 PTPRGP23470 1445 aa33.53■■■□□ 2.96
MSH5-210ENST00000463094 TNIKQ9UKE5 1360 aa33.49■■■□□ 2.95
MSH5-210ENST00000463094 ADCY10Q96PN6 1610 aa33.42■■■□□ 2.94
MSH5-210ENST00000463094 UGGT2Q9NYU1 1516 aa33.37■■■□□ 2.93
MSH5-210ENST00000463094 PRXQ9BXM0 1461 aa33.37■■■□□ 2.93
MSH5-210ENST00000463094 MAPKBP1O60336 1514 aa33.34■■■□□ 2.93
MSH5-210ENST00000463094 DISP1Q96F81 1524 aa33.33■■■□□ 2.93
MSH5-210ENST00000463094 CSRNP3Q8WYN3 585 aa33.33■■■□□ 2.93
MSH5-210ENST00000463094 CTTNBP2Q8WZ74 1663 aa33.32■■■□□ 2.92
MSH5-210ENST00000463094 FAM69CQ0P6D2 419 aa33.31■■■□□ 2.92
MSH5-210ENST00000463094 EEA1Q15075 1411 aa33.29■■■□□ 2.92
MSH5-210ENST00000463094 GOLGA3Q08378 1498 aa33.27■■■□□ 2.92
MSH5-210ENST00000463094 ABCC10Q5T3U5 1492 aa33.27■■■□□ 2.92
MSH5-210ENST00000463094 KIAA0556O60303 1618 aa33.26■■■□□ 2.91
MSH5-210ENST00000463094 UACAQ9BZF9 1416 aa33.26■■■□□ 2.91
MSH5-210ENST00000463094 ABCC2Q92887 1545 aa33.24■■■□□ 2.91
MSH5-210ENST00000463094 FAM9AQ8IZU1 332 aaPredicted RBP33.23■■■□□ 2.91
MSH5-210ENST00000463094 KIF13AQ9H1H9 1805 aa33.21■■■□□ 2.91
MSH5-210ENST00000463094 UHRF1BP1LA0JNW5 1464 aa33.2■■■□□ 2.91
MSH5-210ENST00000463094 DIP2BQ9P265 1576 aa33.16■■■□□ 2.9
MSH5-210ENST00000463094 PLB1Q6P1J6 1458 aa33.11■■■□□ 2.89
MSH5-210ENST00000463094 ASXL2Q76L83 1435 aa33.09■■■□□ 2.89
MSH5-210ENST00000463094 KDM5BQ9UGL1 1544 aa33.03■■■□□ 2.88
MSH5-210ENST00000463094 CHIC1Q5VXU3 224 aa33.03■■■□□ 2.88
MSH5-210ENST00000463094 P3H3Q8IVL6 736 aa32.99■■■□□ 2.87
MSH5-210ENST00000463094 ZCCHC11Q5TAX3 1644 aaKnown RBP32.96■■■□□ 2.87
MSH5-210ENST00000463094 RANGAP1P46060 587 aaPredicted RBP32.94■■■□□ 2.86
MSH5-210ENST00000463094 TSPOAP1O95153 1857 aa32.91■■■□□ 2.86
MSH5-210ENST00000463094 ABCA8O94911 1581 aa32.9■■■□□ 2.86
MSH5-210ENST00000463094 KIF21BO75037 1637 aa32.89■■■□□ 2.86
MSH5-210ENST00000463094 GLI2P10070 1586 aa32.89■■■□□ 2.86
MSH5-210ENST00000463094 EPRSP07814 1512 aaKnown RBP32.86■■■□□ 2.85
MSH5-210ENST00000463094 WDR7Q9Y4E6 1490 aa32.85■■■□□ 2.85
MSH5-210ENST00000463094 SAMD9Q5K651 1589 aa32.84■■■□□ 2.85
MSH5-210ENST00000463094 KDM6BO15054 1643 aa32.84■■■□□ 2.85
MSH5-210ENST00000463094 UBTFP17480 764 aaKnown RBP32.82■■■□□ 2.84
MSH5-210ENST00000463094 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
MSH5-210ENST00000463094 EHMT2Q96KQ7 1210 aa32.8■■■□□ 2.84
MSH5-210ENST00000463094 ARID3CA6NKF2 412 aa32.77■■■□□ 2.84
MSH5-210ENST00000463094 KCNH8Q96L42 1107 aa32.77■■■□□ 2.84
MSH5-210ENST00000463094 TEX14Q8IWB6 1497 aa32.74■■■□□ 2.83
MSH5-210ENST00000463094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.74■■■□□ 2.83
MSH5-210ENST00000463094 HNRNPUL2Q1KMD3 747 aaKnown RBP32.74■■■□□ 2.83
MSH5-210ENST00000463094 EFCAB5A4FU69 1503 aa32.71■■■□□ 2.83
MSH5-210ENST00000463094 MAP3K4Q9Y6R4 1608 aa32.7■■■□□ 2.83
MSH5-210ENST00000463094 FHOD3Q2V2M9 1422 aa32.7■■■□□ 2.83
MSH5-210ENST00000463094 RAPGEF6Q8TEU7 1601 aa32.69■■■□□ 2.82
MSH5-210ENST00000463094 ATP10BO94823 1461 aa32.66■■■□□ 2.82
MSH5-210ENST00000463094 PPRC1Q5VV67 1664 aaKnown RBP32.64■■■□□ 2.82
MSH5-210ENST00000463094 CD109Q6YHK3 1445 aa32.63■■■□□ 2.81
MSH5-210ENST00000463094 CFAP43Q8NDM7 1665 aa32.58■■■□□ 2.81
MSH5-210ENST00000463094 NUP153P49790 1475 aaKnown RBP32.54■■■□□ 2.8
MSH5-210ENST00000463094 MAGI3Q5TCQ9 1506 aa32.52■■■□□ 2.8
MSH5-210ENST00000463094 PLEKHD1A6NEE1 506 aa32.49■■■□□ 2.79
MSH5-210ENST00000463094 ATP1B4Q9UN42 357 aaPredicted RBP32.47■■■□□ 2.79
MSH5-210ENST00000463094 FMN1Q68DA7 1419 aa32.46■■■□□ 2.79
MSH5-210ENST00000463094 COL17A1Q9UMD9 1497 aaPredicted RBP32.42■■■□□ 2.78
MSH5-210ENST00000463094 ARHGAP35Q9NRY4 1499 aa32.4■■■□□ 2.78
MSH5-210ENST00000463094 ABCA9Q8IUA7 1624 aa32.39■■■□□ 2.78
MSH5-210ENST00000463094 PHLDB1Q86UU1 1377 aa32.34■■■□□ 2.77
MSH5-210ENST00000463094 HECW1Q76N89 1606 aa32.32■■■□□ 2.76
MSH5-210ENST00000463094 CDK11AQ9UQ88 783 aaPredicted RBP32.31■■■□□ 2.76
MSH5-210ENST00000463094 CDK13Q14004 1512 aaKnown RBP32.27■■■□□ 2.76
MSH5-210ENST00000463094 ARAP3Q8WWN8 1544 aa32.26■■■□□ 2.75
MSH5-210ENST00000463094 NEO1Q92859 1461 aa32.25■■■□□ 2.75
MSH5-210ENST00000463094 KDM4FA0A1W2PPD8 638 aa32.24■■■□□ 2.75
MSH5-210ENST00000463094 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.16■■■□□ 2.74
MSH5-210ENST00000463094 ADGRL1O94910 1474 aa32.15■■■□□ 2.74
MSH5-210ENST00000463094 CLIP1P30622 1438 aa32.14■■■□□ 2.74
MSH5-210ENST00000463094 CFAP74Q9C0B2 1584 aa32.12■■■□□ 2.73
MSH5-210ENST00000463094 FANCAO15360 1455 aa32.12■■■□□ 2.73
MSH5-210ENST00000463094 RAPGEF3O95398 923 aa32.12■■■□□ 2.73
MSH5-210ENST00000463094 TTC37Q6PGP7 1564 aa32.09■■■□□ 2.73
MSH5-210ENST00000463094 CASKIN1Q8WXD9 1431 aa32.09■■■□□ 2.73
MSH5-210ENST00000463094 AKNAQ7Z591 1439 aa32.08■■■□□ 2.73
MSH5-210ENST00000463094 CCDC18Q5T9S5 1454 aa32.07■■■□□ 2.72
MSH5-210ENST00000463094 DENND4BO75064 1496 aaPredicted RBP32.05■■■□□ 2.72
MSH5-210ENST00000463094 TROQ12816 1431 aaPredicted RBP32.05■■■□□ 2.72
MSH5-210ENST00000463094 KIF14Q15058 1648 aa32.04■■■□□ 2.72
MSH5-210ENST00000463094 PCF11O94913 1555 aaKnown RBP32.04■■■□□ 2.72
MSH5-210ENST00000463094 PLCH2O75038 1416 aa32.01■■■□□ 2.72
MSH5-210ENST00000463094 FYCO1Q9BQS8 1478 aa32■■■□□ 2.71
MSH5-210ENST00000463094 EFCAB2Q5VUJ9 269 aa31.99■■■□□ 2.71
MSH5-210ENST00000463094 MYO5CQ9NQX4 1742 aa31.94■■■□□ 2.7
MSH5-210ENST00000463094 ARID4BQ4LE39 1312 aaPredicted RBP31.93■■■□□ 2.7
MSH5-210ENST00000463094 FRMPD1Q5SYB0 1578 aa31.92■■■□□ 2.7
MSH5-210ENST00000463094 LRRIQ1Q96JM4 1722 aa31.92■■■□□ 2.7
MSH5-210ENST00000463094 SCAPERQ9BY12 1400 aa31.9■■■□□ 2.7
MSH5-210ENST00000463094 ARHGAP5Q13017 1502 aa31.9■■■□□ 2.7
MSH5-210ENST00000463094 RICTORQ6R327 1708 aa31.86■■■□□ 2.69
MSH5-210ENST00000463094 CEP162Q5TB80 1403 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms