RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 CYB5RLQ6IPT4 315 aa20.32■□□□□ 0.84
HPS1-206ENST00000462743 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
HPS1-206ENST00000462743 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
HPS1-206ENST00000462743 EEA1Q15075 1411 aa20.28■□□□□ 0.84
HPS1-206ENST00000462743 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
HPS1-206ENST00000462743 PRXQ9BXM0 1461 aa20.27■□□□□ 0.84
HPS1-206ENST00000462743 PRG4Q92954 1404 aaPredicted RBP20.23■□□□□ 0.83
HPS1-206ENST00000462743 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
HPS1-206ENST00000462743 IQGAP2Q13576 1575 aa20.14■□□□□ 0.81
HPS1-206ENST00000462743 UGGT2Q9NYU1 1516 aa20.09■□□□□ 0.81
HPS1-206ENST00000462743 FAM9AQ8IZU1 332 aaPredicted RBP20.09■□□□□ 0.81
HPS1-206ENST00000462743 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
HPS1-206ENST00000462743 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
HPS1-206ENST00000462743 DISP1Q96F81 1524 aa20.04■□□□□ 0.8
HPS1-206ENST00000462743 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
HPS1-206ENST00000462743 PTPRGP23470 1445 aa20.02■□□□□ 0.8
HPS1-206ENST00000462743 KIF21BO75037 1637 aa20.01■□□□□ 0.79
HPS1-206ENST00000462743 GOLGA3Q08378 1498 aa19.97■□□□□ 0.79
HPS1-206ENST00000462743 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
HPS1-206ENST00000462743 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
HPS1-206ENST00000462743 UHRF1BP1LA0JNW5 1464 aa19.89■□□□□ 0.77
HPS1-206ENST00000462743 ADCY10Q96PN6 1610 aa19.88■□□□□ 0.77
HPS1-206ENST00000462743 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
HPS1-206ENST00000462743 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
HPS1-206ENST00000462743 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
HPS1-206ENST00000462743 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
HPS1-206ENST00000462743 SAMD9Q5K651 1589 aa19.83■□□□□ 0.77
HPS1-206ENST00000462743 ABCC2Q92887 1545 aa19.81■□□□□ 0.76
HPS1-206ENST00000462743 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
HPS1-206ENST00000462743 P3H3Q8IVL6 736 aa19.79■□□□□ 0.76
HPS1-206ENST00000462743 KDM5BQ9UGL1 1544 aa19.78■□□□□ 0.76
HPS1-206ENST00000462743 ABCA8O94911 1581 aa19.77■□□□□ 0.76
HPS1-206ENST00000462743 EFCAB5A4FU69 1503 aa19.76■□□□□ 0.75
HPS1-206ENST00000462743 PLB1Q6P1J6 1458 aa19.75■□□□□ 0.75
HPS1-206ENST00000462743 EHMT2Q96KQ7 1210 aa19.74■□□□□ 0.75
HPS1-206ENST00000462743 ABCC10Q5T3U5 1492 aa19.73■□□□□ 0.75
HPS1-206ENST00000462743 RANGAP1P46060 587 aaPredicted RBP19.71■□□□□ 0.75
HPS1-206ENST00000462743 FHOD3Q2V2M9 1422 aa19.69■□□□□ 0.74
HPS1-206ENST00000462743 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
HPS1-206ENST00000462743 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
HPS1-206ENST00000462743 FAM69CQ0P6D2 419 aa19.68■□□□□ 0.74
HPS1-206ENST00000462743 ARHGAP35Q9NRY4 1499 aa19.67■□□□□ 0.74
HPS1-206ENST00000462743 ZCCHC11Q5TAX3 1644 aaKnown RBP19.65■□□□□ 0.74
HPS1-206ENST00000462743 DIP2BQ9P265 1576 aa19.64■□□□□ 0.73
HPS1-206ENST00000462743 ATP10BO94823 1461 aa19.63■□□□□ 0.73
HPS1-206ENST00000462743 RAPGEF6Q8TEU7 1601 aa19.62■□□□□ 0.73
HPS1-206ENST00000462743 GLI2P10070 1586 aa19.61■□□□□ 0.73
HPS1-206ENST00000462743 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
HPS1-206ENST00000462743 NUP153P49790 1475 aaKnown RBP19.58■□□□□ 0.72
HPS1-206ENST00000462743 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.72
HPS1-206ENST00000462743 EPRSP07814 1512 aaKnown RBP19.57■□□□□ 0.72
HPS1-206ENST00000462743 CLIP1P30622 1438 aa19.54■□□□□ 0.72
HPS1-206ENST00000462743 LOC105371045A0A1W2PR82 267 aa19.52■□□□□ 0.72
HPS1-206ENST00000462743 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
HPS1-206ENST00000462743 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
HPS1-206ENST00000462743 KCNH8Q96L42 1107 aa19.49■□□□□ 0.71
HPS1-206ENST00000462743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.48■□□□□ 0.71
HPS1-206ENST00000462743 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
HPS1-206ENST00000462743 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.71
HPS1-206ENST00000462743 TSPOAP1O95153 1857 aa19.45■□□□□ 0.7
HPS1-206ENST00000462743 CASKIN1Q8WXD9 1431 aa19.45■□□□□ 0.7
HPS1-206ENST00000462743 HECW1Q76N89 1606 aa19.44■□□□□ 0.7
HPS1-206ENST00000462743 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
HPS1-206ENST00000462743 PPRC1Q5VV67 1664 aaKnown RBP19.43■□□□□ 0.7
HPS1-206ENST00000462743 CFAP43Q8NDM7 1665 aa19.43■□□□□ 0.7
HPS1-206ENST00000462743 CDK11AQ9UQ88 783 aaPredicted RBP19.42■□□□□ 0.7
HPS1-206ENST00000462743 CD109Q6YHK3 1445 aa19.42■□□□□ 0.7
HPS1-206ENST00000462743 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
HPS1-206ENST00000462743 ATP1B4Q9UN42 357 aaPredicted RBP19.41■□□□□ 0.7
HPS1-206ENST00000462743 CDK13Q14004 1512 aaKnown RBP19.4■□□□□ 0.7
HPS1-206ENST00000462743 TEX14Q8IWB6 1497 aa19.39■□□□□ 0.69
HPS1-206ENST00000462743 ABCA9Q8IUA7 1624 aa19.38■□□□□ 0.69
HPS1-206ENST00000462743 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
HPS1-206ENST00000462743 CCDC18Q5T9S5 1454 aa19.34■□□□□ 0.69
HPS1-206ENST00000462743 LRRIQ1Q96JM4 1722 aa19.34■□□□□ 0.69
HPS1-206ENST00000462743 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.69
HPS1-206ENST00000462743 PCF11O94913 1555 aaKnown RBP19.33■□□□□ 0.69
HPS1-206ENST00000462743 TROQ12816 1431 aaPredicted RBP19.31■□□□□ 0.68
HPS1-206ENST00000462743 KDM6BO15054 1643 aa19.3■□□□□ 0.68
HPS1-206ENST00000462743 COL17A1Q9UMD9 1497 aaPredicted RBP19.29■□□□□ 0.68
HPS1-206ENST00000462743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.29■□□□□ 0.68
HPS1-206ENST00000462743 NEO1Q92859 1461 aa19.26■□□□□ 0.67
HPS1-206ENST00000462743 ARAP3Q8WWN8 1544 aa19.25■□□□□ 0.67
HPS1-206ENST00000462743 VPS8Q8N3P4 1428 aa19.24■□□□□ 0.67
HPS1-206ENST00000462743 PLCH2O75038 1416 aa19.23■□□□□ 0.67
HPS1-206ENST00000462743 TTC37Q6PGP7 1564 aa19.21■□□□□ 0.67
HPS1-206ENST00000462743 KIF14Q15058 1648 aa19.19■□□□□ 0.66
HPS1-206ENST00000462743 EFCAB2Q5VUJ9 269 aa19.18■□□□□ 0.66
HPS1-206ENST00000462743 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
HPS1-206ENST00000462743 FANCAO15360 1455 aa19.16■□□□□ 0.66
HPS1-206ENST00000462743 CFAP74Q9C0B2 1584 aa19.15■□□□□ 0.66
HPS1-206ENST00000462743 MYO5CQ9NQX4 1742 aa19.14■□□□□ 0.66
HPS1-206ENST00000462743 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
HPS1-206ENST00000462743 MAP3K1Q13233 1512 aa19.13■□□□□ 0.65
HPS1-206ENST00000462743 RAPGEF3O95398 923 aa19.11■□□□□ 0.65
HPS1-206ENST00000462743 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
HPS1-206ENST00000462743 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.65
HPS1-206ENST00000462743 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
HPS1-206ENST00000462743 EHBP1L1Q8N3D4 1523 aa19.08■□□□□ 0.64
HPS1-206ENST00000462743 GPATCH8Q9UKJ3 1502 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms