RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC3-205ENST00000462715 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
TRAPPC3-205ENST00000462715 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
TRAPPC3-205ENST00000462715 NUP160Q12769 1436 aa17.8■□□□□ 0.44
TRAPPC3-205ENST00000462715 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
TRAPPC3-205ENST00000462715 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.43
TRAPPC3-205ENST00000462715 DNAJC5Q9H3Z4 198 aa17.77■□□□□ 0.43
TRAPPC3-205ENST00000462715 ACIN1Q9UKV3 1341 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-205ENST00000462715 KIF21BO75037 1637 aa17.71■□□□□ 0.43
TRAPPC3-205ENST00000462715 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
TRAPPC3-205ENST00000462715 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
TRAPPC3-205ENST00000462715 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
TRAPPC3-205ENST00000462715 SHROOM2Q13796 1616 aa17.64■□□□□ 0.41
TRAPPC3-205ENST00000462715 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
TRAPPC3-205ENST00000462715 ARHGEF11O15085 1522 aa17.61■□□□□ 0.41
TRAPPC3-205ENST00000462715 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
TRAPPC3-205ENST00000462715 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.41
TRAPPC3-205ENST00000462715 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.41
TRAPPC3-205ENST00000462715 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.41
TRAPPC3-205ENST00000462715 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC3-205ENST00000462715 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-205ENST00000462715 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
TRAPPC3-205ENST00000462715 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
TRAPPC3-205ENST00000462715 UGGT2Q9NYU1 1516 aa17.54■□□□□ 0.4
TRAPPC3-205ENST00000462715 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
TRAPPC3-205ENST00000462715 ERCC6L2Q5T890 1561 aa17.51■□□□□ 0.39
TRAPPC3-205ENST00000462715 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
TRAPPC3-205ENST00000462715 DISP1Q96F81 1524 aa17.47■□□□□ 0.39
TRAPPC3-205ENST00000462715 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
TRAPPC3-205ENST00000462715 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
TRAPPC3-205ENST00000462715 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
TRAPPC3-205ENST00000462715 CYB5RLQ6IPT4 315 aa17.43■□□□□ 0.38
TRAPPC3-205ENST00000462715 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
TRAPPC3-205ENST00000462715 SAMD9Q5K651 1589 aa17.42■□□□□ 0.38
TRAPPC3-205ENST00000462715 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
TRAPPC3-205ENST00000462715 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-205ENST00000462715 PTPRGP23470 1445 aa17.4■□□□□ 0.38
TRAPPC3-205ENST00000462715 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
TRAPPC3-205ENST00000462715 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
TRAPPC3-205ENST00000462715 ARHGAP35Q9NRY4 1499 aa17.32■□□□□ 0.36
TRAPPC3-205ENST00000462715 CLIP1P30622 1438 aa17.32■□□□□ 0.36
TRAPPC3-205ENST00000462715 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
TRAPPC3-205ENST00000462715 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
TRAPPC3-205ENST00000462715 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
TRAPPC3-205ENST00000462715 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.35
TRAPPC3-205ENST00000462715 ADCY10Q96PN6 1610 aa17.26■□□□□ 0.35
TRAPPC3-205ENST00000462715 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
TRAPPC3-205ENST00000462715 FMN1Q68DA7 1419 aa17.25■□□□□ 0.35
TRAPPC3-205ENST00000462715 PLB1Q6P1J6 1458 aa17.25■□□□□ 0.35
TRAPPC3-205ENST00000462715 ABCA8O94911 1581 aa17.24■□□□□ 0.35
TRAPPC3-205ENST00000462715 NPM1P06748 294 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRAPPC3-205ENST00000462715 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
TRAPPC3-205ENST00000462715 KDM5BQ9UGL1 1544 aa17.17■□□□□ 0.34
TRAPPC3-205ENST00000462715 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
TRAPPC3-205ENST00000462715 ZCCHC11Q5TAX3 1644 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-205ENST00000462715 NUP153P49790 1475 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-205ENST00000462715 MAPKBP1O60336 1514 aa17.13■□□□□ 0.33
TRAPPC3-205ENST00000462715 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-205ENST00000462715 CASKIN1Q8WXD9 1431 aa17.12■□□□□ 0.33
TRAPPC3-205ENST00000462715 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
TRAPPC3-205ENST00000462715 BCL11AQ9H165 835 aa17.12■□□□□ 0.33
TRAPPC3-205ENST00000462715 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
TRAPPC3-205ENST00000462715 PCF11O94913 1555 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-205ENST00000462715 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC3-205ENST00000462715 ATP10BO94823 1461 aa17.1■□□□□ 0.33
TRAPPC3-205ENST00000462715 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
TRAPPC3-205ENST00000462715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-205ENST00000462715 HNRNPUL2Q1KMD3 747 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-205ENST00000462715 ASXL2Q76L83 1435 aa17.08■□□□□ 0.32
TRAPPC3-205ENST00000462715 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
TRAPPC3-205ENST00000462715 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-205ENST00000462715 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
TRAPPC3-205ENST00000462715 WDR7Q9Y4E6 1490 aa17.04■□□□□ 0.32
TRAPPC3-205ENST00000462715 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-205ENST00000462715 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-205ENST00000462715 CDK11AQ9UQ88 783 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-205ENST00000462715 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
TRAPPC3-205ENST00000462715 ANP32EQ9BTT0 268 aa17■□□□□ 0.31
TRAPPC3-205ENST00000462715 PLEKHD1A6NEE1 506 aa17■□□□□ 0.31
TRAPPC3-205ENST00000462715 LRRIQ1Q96JM4 1722 aa17■□□□□ 0.31
TRAPPC3-205ENST00000462715 DIP2BQ9P265 1576 aa16.99■□□□□ 0.31
TRAPPC3-205ENST00000462715 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
TRAPPC3-205ENST00000462715 GLI2P10070 1586 aa16.95■□□□□ 0.3
TRAPPC3-205ENST00000462715 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
TRAPPC3-205ENST00000462715 KCNH8Q96L42 1107 aa16.95■□□□□ 0.3
TRAPPC3-205ENST00000462715 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-205ENST00000462715 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
TRAPPC3-205ENST00000462715 APLP2Q06481 763 aa16.91■□□□□ 0.3
TRAPPC3-205ENST00000462715 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
TRAPPC3-205ENST00000462715 TIAM1Q13009 1591 aa16.91■□□□□ 0.3
TRAPPC3-205ENST00000462715 KIF14Q15058 1648 aa16.89■□□□□ 0.29
TRAPPC3-205ENST00000462715 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
TRAPPC3-205ENST00000462715 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
TRAPPC3-205ENST00000462715 MAP3K4Q9Y6R4 1608 aa16.87■□□□□ 0.29
TRAPPC3-205ENST00000462715 MAGI3Q5TCQ9 1506 aa16.87■□□□□ 0.29
TRAPPC3-205ENST00000462715 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
TRAPPC3-205ENST00000462715 CD109Q6YHK3 1445 aa16.85■□□□□ 0.29
TRAPPC3-205ENST00000462715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAPPC3-205ENST00000462715 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC3-205ENST00000462715 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms