RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 KIAA0586Q9BVV6 1533 aa39.09■■■■□ 3.85
LIMK2-206ENST00000462625 ERCC6L2Q5T890 1561 aa39.08■■■■□ 3.85
LIMK2-206ENST00000462625 PRG4Q92954 1404 aaPredicted RBP39.06■■■■□ 3.84
LIMK2-206ENST00000462625 RAPGEF2Q9Y4G8 1499 aa39.04■■■■□ 3.84
LIMK2-206ENST00000462625 IQGAP2Q13576 1575 aa38.87■■■■□ 3.81
LIMK2-206ENST00000462625 EEA1Q15075 1411 aa38.81■■■■□ 3.8
LIMK2-206ENST00000462625 PRXQ9BXM0 1461 aa38.79■■■■□ 3.8
LIMK2-206ENST00000462625 CHIC1Q5VXU3 224 aa38.78■■■■□ 3.8
LIMK2-206ENST00000462625 CSRNP3Q8WYN3 585 aa38.78■■■■□ 3.8
LIMK2-206ENST00000462625 CARMIL2Q6F5E8 1435 aa38.75■■■■□ 3.79
LIMK2-206ENST00000462625 CTTNBP2Q8WZ74 1663 aa38.74■■■■□ 3.79
LIMK2-206ENST00000462625 TRHP20396 242 aaPredicted RBP38.71■■■■□ 3.79
LIMK2-206ENST00000462625 UGGT2Q9NYU1 1516 aa38.63■■■■□ 3.77
LIMK2-206ENST00000462625 TNIKQ9UKE5 1360 aa38.59■■■■□ 3.77
LIMK2-206ENST00000462625 PTPRGP23470 1445 aa38.59■■■■□ 3.77
LIMK2-206ENST00000462625 FAM9AQ8IZU1 332 aaPredicted RBP38.59■■■■□ 3.77
LIMK2-206ENST00000462625 DISP1Q96F81 1524 aa38.54■■■■□ 3.76
LIMK2-206ENST00000462625 NPM1P06748 294 aaKnown RBP eCLIP38.52■■■■□ 3.76
LIMK2-206ENST00000462625 TTBK1Q5TCY1 1321 aaPredicted RBP38.51■■■■□ 3.76
LIMK2-206ENST00000462625 KIAA0556O60303 1618 aa38.48■■■■□ 3.75
LIMK2-206ENST00000462625 ADCY10Q96PN6 1610 aa38.48■■■■□ 3.75
LIMK2-206ENST00000462625 GOLGA3Q08378 1498 aa38.47■■■■□ 3.75
LIMK2-206ENST00000462625 KIF21BO75037 1637 aa38.4■■■■□ 3.74
LIMK2-206ENST00000462625 UACAQ9BZF9 1416 aa38.31■■■■□ 3.72
LIMK2-206ENST00000462625 MAPKBP1O60336 1514 aa38.29■■■■□ 3.72
LIMK2-206ENST00000462625 UHRF1BP1LA0JNW5 1464 aa38.28■■■■□ 3.72
LIMK2-206ENST00000462625 ABCC2Q92887 1545 aa38.25■■■■□ 3.71
LIMK2-206ENST00000462625 KIF13AQ9H1H9 1805 aa38.2■■■■□ 3.71
LIMK2-206ENST00000462625 SAMD9Q5K651 1589 aa38.14■■■■□ 3.7
LIMK2-206ENST00000462625 UBTFP17480 764 aaKnown RBP38.13■■■■□ 3.69
LIMK2-206ENST00000462625 P3H3Q8IVL6 736 aa38.13■■■■□ 3.69
LIMK2-206ENST00000462625 ABCC10Q5T3U5 1492 aa38.13■■■■□ 3.69
LIMK2-206ENST00000462625 EHMT2Q96KQ7 1210 aa38.1■■■■□ 3.69
LIMK2-206ENST00000462625 RANGAP1P46060 587 aaPredicted RBP38.09■■■■□ 3.69
LIMK2-206ENST00000462625 FAM69CQ0P6D2 419 aa38.09■■■■□ 3.69
LIMK2-206ENST00000462625 PLB1Q6P1J6 1458 aa38.09■■■■□ 3.69
LIMK2-206ENST00000462625 KDM5BQ9UGL1 1544 aa38.08■■■■□ 3.69
LIMK2-206ENST00000462625 DIP2BQ9P265 1576 aa38.06■■■■□ 3.68
LIMK2-206ENST00000462625 ABCA8O94911 1581 aa38.06■■■■□ 3.68
LIMK2-206ENST00000462625 ZCCHC11Q5TAX3 1644 aaKnown RBP38.05■■■■□ 3.68
LIMK2-206ENST00000462625 ASXL2Q76L83 1435 aa38.02■■■■□ 3.68
LIMK2-206ENST00000462625 EFCAB5A4FU69 1503 aa37.99■■■■□ 3.67
LIMK2-206ENST00000462625 FHOD3Q2V2M9 1422 aa37.89■■■■□ 3.66
LIMK2-206ENST00000462625 RAPGEF6Q8TEU7 1601 aa37.87■■■■□ 3.65
LIMK2-206ENST00000462625 TSPOAP1O95153 1857 aa37.86■■■■□ 3.65
LIMK2-206ENST00000462625 GLI2P10070 1586 aa37.84■■■■□ 3.65
LIMK2-206ENST00000462625 WDR7Q9Y4E6 1490 aa37.81■■■■□ 3.64
LIMK2-206ENST00000462625 EPRSP07814 1512 aaKnown RBP37.79■■■■□ 3.64
LIMK2-206ENST00000462625 ARID3CA6NKF2 412 aa37.74■■■■□ 3.63
LIMK2-206ENST00000462625 ATP10BO94823 1461 aa37.74■■■■□ 3.63
LIMK2-206ENST00000462625 ARHGAP35Q9NRY4 1499 aa37.7■■■■□ 3.63
LIMK2-206ENST00000462625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.68■■■■□ 3.62
LIMK2-206ENST00000462625 HNRNPUL2Q1KMD3 747 aaKnown RBP37.68■■■■□ 3.62
LIMK2-206ENST00000462625 NUP153P49790 1475 aaKnown RBP37.66■■■■□ 3.62
LIMK2-206ENST00000462625 MAP3K4Q9Y6R4 1608 aa37.66■■■■□ 3.62
LIMK2-206ENST00000462625 KCNH8Q96L42 1107 aa37.66■■■■□ 3.62
LIMK2-206ENST00000462625 FMN1Q68DA7 1419 aa37.66■■■■□ 3.62
LIMK2-206ENST00000462625 PPRC1Q5VV67 1664 aaKnown RBP37.6■■■■□ 3.61
LIMK2-206ENST00000462625 CFAP43Q8NDM7 1665 aa37.58■■■■□ 3.61
LIMK2-206ENST00000462625 KDM6BO15054 1643 aa37.56■■■■□ 3.6
LIMK2-206ENST00000462625 TEX14Q8IWB6 1497 aa37.55■■■■□ 3.6
LIMK2-206ENST00000462625 ATP1B4Q9UN42 357 aaPredicted RBP37.5■■■■□ 3.59
LIMK2-206ENST00000462625 CD109Q6YHK3 1445 aa37.5■■■■□ 3.59
LIMK2-206ENST00000462625 HECW1Q76N89 1606 aa37.5■■■■□ 3.59
LIMK2-206ENST00000462625 PLEKHD1A6NEE1 506 aa37.49■■■■□ 3.59
LIMK2-206ENST00000462625 CLIP1P30622 1438 aa37.45■■■■□ 3.59
LIMK2-206ENST00000462625 MAGI3Q5TCQ9 1506 aa37.42■■■■□ 3.58
LIMK2-206ENST00000462625 ABCA9Q8IUA7 1624 aa37.41■■■■□ 3.58
LIMK2-206ENST00000462625 CDK13Q14004 1512 aaKnown RBP37.38■■■■□ 3.57
LIMK2-206ENST00000462625 CDK11AQ9UQ88 783 aaPredicted RBP37.33■■■■□ 3.57
LIMK2-206ENST00000462625 CASKIN1Q8WXD9 1431 aa37.29■■■■□ 3.56
LIMK2-206ENST00000462625 PCF11O94913 1555 aaKnown RBP37.27■■■■□ 3.56
LIMK2-206ENST00000462625 LRRIQ1Q96JM4 1722 aa37.24■■■■□ 3.55
LIMK2-206ENST00000462625 CCDC18Q5T9S5 1454 aa37.22■■■■□ 3.55
LIMK2-206ENST00000462625 CEP162Q5TB80 1403 aa37.22■■■■□ 3.55
LIMK2-206ENST00000462625 FYCO1Q9BQS8 1478 aa37.21■■■■□ 3.55
LIMK2-206ENST00000462625 COL17A1Q9UMD9 1497 aaPredicted RBP37.2■■■■□ 3.54
LIMK2-206ENST00000462625 PHLDB1Q86UU1 1377 aa37.19■■■■□ 3.54
LIMK2-206ENST00000462625 LOC105371045A0A1W2PR82 267 aa37.19■■■■□ 3.54
LIMK2-206ENST00000462625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.18■■■■□ 3.54
LIMK2-206ENST00000462625 NEO1Q92859 1461 aa37.13■■■■□ 3.53
LIMK2-206ENST00000462625 TTC37Q6PGP7 1564 aa37.12■■■■□ 3.53
LIMK2-206ENST00000462625 TROQ12816 1431 aaPredicted RBP37.11■■■■□ 3.53
LIMK2-206ENST00000462625 ARAP3Q8WWN8 1544 aa37.1■■■■□ 3.53
LIMK2-206ENST00000462625 KIF14Q15058 1648 aa37.1■■■■□ 3.53
LIMK2-206ENST00000462625 CFAP74Q9C0B2 1584 aa37.08■■■■□ 3.53
LIMK2-206ENST00000462625 MYO5CQ9NQX4 1742 aa37.02■■■■□ 3.52
LIMK2-206ENST00000462625 FANCAO15360 1455 aa37.01■■■■□ 3.52
LIMK2-206ENST00000462625 PLCH2O75038 1416 aa36.98■■■■□ 3.51
LIMK2-206ENST00000462625 AKNAQ7Z591 1439 aa36.95■■■■□ 3.51
LIMK2-206ENST00000462625 AEBP2Q6ZN18 517 aaPredicted RBP36.95■■■■□ 3.51
LIMK2-206ENST00000462625 RAPGEF3O95398 923 aa36.89■■■■□ 3.5
LIMK2-206ENST00000462625 EFCAB2Q5VUJ9 269 aa36.89■■■■□ 3.5
LIMK2-206ENST00000462625 DENND4BO75064 1496 aaPredicted RBP36.87■■■■□ 3.49
LIMK2-206ENST00000462625 ARHGAP5Q13017 1502 aa36.83■■■■□ 3.49
LIMK2-206ENST00000462625 RICTORQ6R327 1708 aa36.82■■■■□ 3.48
LIMK2-206ENST00000462625 ADGRL1O94910 1474 aa36.82■■■■□ 3.48
LIMK2-206ENST00000462625 MTUS2Q5JR59 1369 aa36.81■■■■□ 3.48
LIMK2-206ENST00000462625 VPS8Q8N3P4 1428 aa36.8■■■■□ 3.48
LIMK2-206ENST00000462625 CDC42BPBQ9Y5S2 1711 aa36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms