RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 IGF1RP08069 1367 aa15.02■□□□□ -0
DDX39B-216ENST00000462421 CARMIL1Q5VZK9 1371 aa15.02■□□□□ -0
DDX39B-216ENST00000462421 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
DDX39B-216ENST00000462421 JPH4Q96JJ6 628 aa14.99□□□□□ -0.01
DDX39B-216ENST00000462421 PRG4Q92954 1404 aaPredicted RBP14.97□□□□□ -0.01
DDX39B-216ENST00000462421 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
DDX39B-216ENST00000462421 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
DDX39B-216ENST00000462421 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
DDX39B-216ENST00000462421 CARMIL2Q6F5E8 1435 aa14.93□□□□□ -0.02
DDX39B-216ENST00000462421 RAPGEF2Q9Y4G8 1499 aa14.93□□□□□ -0.02
DDX39B-216ENST00000462421 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
DDX39B-216ENST00000462421 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
DDX39B-216ENST00000462421 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
DDX39B-216ENST00000462421 EEA1Q15075 1411 aa14.85□□□□□ -0.03
DDX39B-216ENST00000462421 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
DDX39B-216ENST00000462421 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.04
DDX39B-216ENST00000462421 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
DDX39B-216ENST00000462421 TNIKQ9UKE5 1360 aa14.81□□□□□ -0.04
DDX39B-216ENST00000462421 PTPRGP23470 1445 aa14.81□□□□□ -0.04
DDX39B-216ENST00000462421 GOLGA3Q08378 1498 aa14.78□□□□□ -0.04
DDX39B-216ENST00000462421 PRXQ9BXM0 1461 aa14.73□□□□□ -0.05
DDX39B-216ENST00000462421 UGGT2Q9NYU1 1516 aa14.71□□□□□ -0.06
DDX39B-216ENST00000462421 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.06
DDX39B-216ENST00000462421 UACAQ9BZF9 1416 aa14.68□□□□□ -0.06
DDX39B-216ENST00000462421 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
DDX39B-216ENST00000462421 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
DDX39B-216ENST00000462421 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
DDX39B-216ENST00000462421 UBTFP17480 764 aaKnown RBP14.66□□□□□ -0.06
DDX39B-216ENST00000462421 DISP1Q96F81 1524 aa14.66□□□□□ -0.06
DDX39B-216ENST00000462421 ADCY10Q96PN6 1610 aa14.65□□□□□ -0.06
DDX39B-216ENST00000462421 MAPKBP1O60336 1514 aa14.65□□□□□ -0.06
DDX39B-216ENST00000462421 ABCC2Q92887 1545 aa14.64□□□□□ -0.07
DDX39B-216ENST00000462421 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
DDX39B-216ENST00000462421 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
DDX39B-216ENST00000462421 PLB1Q6P1J6 1458 aa14.62□□□□□ -0.07
DDX39B-216ENST00000462421 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
DDX39B-216ENST00000462421 ABCC10Q5T3U5 1492 aa14.61□□□□□ -0.07
DDX39B-216ENST00000462421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
DDX39B-216ENST00000462421 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
DDX39B-216ENST00000462421 FOXD1Q16676 465 aa14.59□□□□□ -0.07
DDX39B-216ENST00000462421 KIF21BO75037 1637 aa14.59□□□□□ -0.07
DDX39B-216ENST00000462421 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
DDX39B-216ENST00000462421 DIP2BQ9P265 1576 aa14.53□□□□□ -0.08
DDX39B-216ENST00000462421 KDM5BQ9UGL1 1544 aa14.53□□□□□ -0.08
DDX39B-216ENST00000462421 EFCAB5A4FU69 1503 aa14.52□□□□□ -0.08
DDX39B-216ENST00000462421 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
DDX39B-216ENST00000462421 KCNH8Q96L42 1107 aa14.5□□□□□ -0.09
DDX39B-216ENST00000462421 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
DDX39B-216ENST00000462421 WDR7Q9Y4E6 1490 aa14.5□□□□□ -0.09
DDX39B-216ENST00000462421 ZCCHC11Q5TAX3 1644 aaKnown RBP14.49□□□□□ -0.09
DDX39B-216ENST00000462421 TEX14Q8IWB6 1497 aa14.49□□□□□ -0.09
DDX39B-216ENST00000462421 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
DDX39B-216ENST00000462421 ABCA8O94911 1581 aa14.47□□□□□ -0.09
DDX39B-216ENST00000462421 SAMD9Q5K651 1589 aa14.47□□□□□ -0.09
DDX39B-216ENST00000462421 KIF13AQ9H1H9 1805 aa14.47□□□□□ -0.09
DDX39B-216ENST00000462421 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
DDX39B-216ENST00000462421 EPRSP07814 1512 aaKnown RBP14.45□□□□□ -0.1
DDX39B-216ENST00000462421 GLI2P10070 1586 aa14.44□□□□□ -0.1
DDX39B-216ENST00000462421 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
DDX39B-216ENST00000462421 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
DDX39B-216ENST00000462421 CDK11AQ9UQ88 783 aaPredicted RBP14.43□□□□□ -0.1
DDX39B-216ENST00000462421 KDM6BO15054 1643 aa14.43□□□□□ -0.1
DDX39B-216ENST00000462421 TSPOAP1O95153 1857 aa14.41□□□□□ -0.1
DDX39B-216ENST00000462421 CD109Q6YHK3 1445 aa14.41□□□□□ -0.1
DDX39B-216ENST00000462421 ATP10BO94823 1461 aa14.38□□□□□ -0.11
DDX39B-216ENST00000462421 HECW1Q76N89 1606 aa14.34□□□□□ -0.11
DDX39B-216ENST00000462421 NUP153P49790 1475 aaKnown RBP14.34□□□□□ -0.11
DDX39B-216ENST00000462421 MAP3K4Q9Y6R4 1608 aa14.33□□□□□ -0.11
DDX39B-216ENST00000462421 CFAP43Q8NDM7 1665 aa14.33□□□□□ -0.11
DDX39B-216ENST00000462421 CLIP1P30622 1438 aa14.32□□□□□ -0.12
DDX39B-216ENST00000462421 PHLDB1Q86UU1 1377 aa14.32□□□□□ -0.12
DDX39B-216ENST00000462421 ARHGAP35Q9NRY4 1499 aa14.31□□□□□ -0.12
DDX39B-216ENST00000462421 MAGI3Q5TCQ9 1506 aa14.31□□□□□ -0.12
DDX39B-216ENST00000462421 MSH5O43196 834 aa14.29□□□□□ -0.12
DDX39B-216ENST00000462421 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.12
DDX39B-216ENST00000462421 ABCA9Q8IUA7 1624 aa14.25□□□□□ -0.13
DDX39B-216ENST00000462421 CDK13Q14004 1512 aaKnown RBP14.24□□□□□ -0.13
DDX39B-216ENST00000462421 NEO1Q92859 1461 aa14.24□□□□□ -0.13
DDX39B-216ENST00000462421 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
DDX39B-216ENST00000462421 PPRC1Q5VV67 1664 aaKnown RBP14.23□□□□□ -0.13
DDX39B-216ENST00000462421 CASKIN1Q8WXD9 1431 aa14.23□□□□□ -0.13
DDX39B-216ENST00000462421 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
DDX39B-216ENST00000462421 KIF14Q15058 1648 aa14.22□□□□□ -0.13
DDX39B-216ENST00000462421 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
DDX39B-216ENST00000462421 FANCAO15360 1455 aa14.19□□□□□ -0.14
DDX39B-216ENST00000462421 TROQ12816 1431 aaPredicted RBP14.19□□□□□ -0.14
DDX39B-216ENST00000462421 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
DDX39B-216ENST00000462421 EFCAB2Q5VUJ9 269 aa14.19□□□□□ -0.14
DDX39B-216ENST00000462421 PCF11O94913 1555 aaKnown RBP14.17□□□□□ -0.14
DDX39B-216ENST00000462421 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
DDX39B-216ENST00000462421 DENND4BO75064 1496 aaPredicted RBP14.17□□□□□ -0.14
DDX39B-216ENST00000462421 ARID4BQ4LE39 1312 aaPredicted RBP14.16□□□□□ -0.14
DDX39B-216ENST00000462421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
DDX39B-216ENST00000462421 APLP2Q06481 763 aa14.16□□□□□ -0.14
DDX39B-216ENST00000462421 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
DDX39B-216ENST00000462421 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
DDX39B-216ENST00000462421 ARHGAP5Q13017 1502 aa14.15□□□□□ -0.14
DDX39B-216ENST00000462421 RAPGEF3O95398 923 aa14.14□□□□□ -0.15
DDX39B-216ENST00000462421 PLCH2O75038 1416 aa14.14□□□□□ -0.15
DDX39B-216ENST00000462421 COL17A1Q9UMD9 1497 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms