RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-204ENST00000462279 PPP1R15AO75807 674 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-204ENST00000462279 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
ERCC8-204ENST00000462279 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
ERCC8-204ENST00000462279 RAB3GAP2Q9H2M9 1393 aa11.24□□□□□ -0.61
ERCC8-204ENST00000462279 CCER2I3L3R5 266 aa11.24□□□□□ -0.61
ERCC8-204ENST00000462279 CCNB3Q8WWL7 1395 aa11.23□□□□□ -0.61
ERCC8-204ENST00000462279 MYT1LQ9UL68 1186 aa11.22□□□□□ -0.61
ERCC8-204ENST00000462279 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
ERCC8-204ENST00000462279 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
ERCC8-204ENST00000462279 FAM50AQ14320 339 aaKnown RBP11.2□□□□□ -0.62
ERCC8-204ENST00000462279 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
ERCC8-204ENST00000462279 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
ERCC8-204ENST00000462279 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
ERCC8-204ENST00000462279 NOP58Q9Y2X3 529 aaKnown RBP11.17□□□□□ -0.62
ERCC8-204ENST00000462279 ERICH3Q5RHP9 1530 aa11.17□□□□□ -0.62
ERCC8-204ENST00000462279 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
ERCC8-204ENST00000462279 CCDC136Q96JN2 1154 aa11.16□□□□□ -0.62
ERCC8-204ENST00000462279 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-204ENST00000462279 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
ERCC8-204ENST00000462279 ARAP1Q96P48 1450 aa11.15□□□□□ -0.63
ERCC8-204ENST00000462279 RTL5Q5HYW3 569 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-204ENST00000462279 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
ERCC8-204ENST00000462279 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
ERCC8-204ENST00000462279 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
ERCC8-204ENST00000462279 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
ERCC8-204ENST00000462279 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
ERCC8-204ENST00000462279 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
ERCC8-204ENST00000462279 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
ERCC8-204ENST00000462279 PRXQ9BXM0 1461 aa11.07□□□□□ -0.64
ERCC8-204ENST00000462279 ANP32AP39687 249 aaKnown RBP11.07□□□□□ -0.64
ERCC8-204ENST00000462279 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
ERCC8-204ENST00000462279 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
ERCC8-204ENST00000462279 CCDC184Q52MB2 194 aa11.06□□□□□ -0.64
ERCC8-204ENST00000462279 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-204ENST00000462279 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
ERCC8-204ENST00000462279 TIMELESSQ9UNS1 1208 aa11.04□□□□□ -0.64
ERCC8-204ENST00000462279 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
ERCC8-204ENST00000462279 NPM2Q86SE8 214 aaKnown RBP11.03□□□□□ -0.64
ERCC8-204ENST00000462279 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
ERCC8-204ENST00000462279 HMGXB3Q12766 1538 aa11.03□□□□□ -0.64
ERCC8-204ENST00000462279 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
ERCC8-204ENST00000462279 IPO9Q96P70 1041 aaKnown RBP11.02□□□□□ -0.65
ERCC8-204ENST00000462279 MRS2Q9HD23 443 aa11.02□□□□□ -0.65
ERCC8-204ENST00000462279 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
ERCC8-204ENST00000462279 LAS1LQ9Y4W2 734 aaKnown RBP11□□□□□ -0.65
ERCC8-204ENST00000462279 MAP3K1Q13233 1512 aa10.99□□□□□ -0.65
ERCC8-204ENST00000462279 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
ERCC8-204ENST00000462279 CUX1P39880 1505 aa10.98□□□□□ -0.65
ERCC8-204ENST00000462279 WASHC2AQ641Q2 1341 aa10.97□□□□□ -0.65
ERCC8-204ENST00000462279 HSPA5P11021 654 aaKnown RBP10.97□□□□□ -0.65
ERCC8-204ENST00000462279 EIF5BO60841 1220 aaKnown RBP10.96□□□□□ -0.65
ERCC8-204ENST00000462279 NEFMP07197 916 aa10.96□□□□□ -0.66
ERCC8-204ENST00000462279 LRRIQ1Q96JM4 1722 aa10.94□□□□□ -0.66
ERCC8-204ENST00000462279 ZBED9Q6R2W3 1325 aa10.93□□□□□ -0.66
ERCC8-204ENST00000462279 AKNAQ7Z591 1439 aa10.92□□□□□ -0.66
ERCC8-204ENST00000462279 PRKRIP1Q9H875 184 aaPredicted RBP10.92□□□□□ -0.66
ERCC8-204ENST00000462279 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
ERCC8-204ENST00000462279 LRRC9Q6ZRR7 1453 aa10.91□□□□□ -0.66
ERCC8-204ENST00000462279 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
ERCC8-204ENST00000462279 POLR3GLQ9BT43 218 aa10.91□□□□□ -0.66
ERCC8-204ENST00000462279 TIAM1Q13009 1591 aa10.91□□□□□ -0.66
ERCC8-204ENST00000462279 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
ERCC8-204ENST00000462279 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
ERCC8-204ENST00000462279 FHAD1B1AJZ9 1412 aa10.87□□□□□ -0.67
ERCC8-204ENST00000462279 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
ERCC8-204ENST00000462279 CNTLNQ9NXG0 1405 aa10.85□□□□□ -0.67
ERCC8-204ENST00000462279 NCAPD3P42695 1498 aa10.84□□□□□ -0.67
ERCC8-204ENST00000462279 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
ERCC8-204ENST00000462279 CHIC2Q9UKJ5 165 aa10.84□□□□□ -0.67
ERCC8-204ENST00000462279 CFTRP13569 1480 aa10.84□□□□□ -0.67
ERCC8-204ENST00000462279 NUDCQ9Y266 331 aa10.84□□□□□ -0.67
ERCC8-204ENST00000462279 UBE2Q2Q8WVN8 375 aa10.83□□□□□ -0.68
ERCC8-204ENST00000462279 RRP7BPQ9NSQ0 103 aa10.83□□□□□ -0.68
ERCC8-204ENST00000462279 CTTNBP2Q8WZ74 1663 aa10.83□□□□□ -0.68
ERCC8-204ENST00000462279 FOXD1Q16676 465 aa10.82□□□□□ -0.68
ERCC8-204ENST00000462279 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
ERCC8-204ENST00000462279 PDE4AP27815 886 aa10.81□□□□□ -0.68
ERCC8-204ENST00000462279 CCDC7Q96M83 1385 aa10.8□□□□□ -0.68
ERCC8-204ENST00000462279 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
ERCC8-204ENST00000462279 USP35Q9P2H5 1018 aa10.8□□□□□ -0.68
ERCC8-204ENST00000462279 POLR1AO95602 1720 aaPredicted RBP10.8□□□□□ -0.68
ERCC8-204ENST00000462279 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
ERCC8-204ENST00000462279 AQRO60306 1485 aaKnown RBP eCLIP10.79□□□□□ -0.68
ERCC8-204ENST00000462279 SLC4A3P48751 1232 aa10.79□□□□□ -0.68
ERCC8-204ENST00000462279 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
ERCC8-204ENST00000462279 EXOC6Q8TAG9 804 aa10.78□□□□□ -0.68
ERCC8-204ENST00000462279 GSE1Q14687 1217 aa10.78□□□□□ -0.68
ERCC8-204ENST00000462279 FHOD3Q2V2M9 1422 aa10.78□□□□□ -0.68
ERCC8-204ENST00000462279 SKAP1Q86WV1 359 aa10.77□□□□□ -0.68
ERCC8-204ENST00000462279 PTPRKQ15262 1439 aa10.77□□□□□ -0.69
ERCC8-204ENST00000462279 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.69
ERCC8-204ENST00000462279 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.69
ERCC8-204ENST00000462279 IGF1RP08069 1367 aa10.77□□□□□ -0.69
ERCC8-204ENST00000462279 DAXXQ9UER7 740 aaPredicted RBP10.77□□□□□ -0.69
ERCC8-204ENST00000462279 KIF7Q2M1P5 1343 aa10.76□□□□□ -0.69
ERCC8-204ENST00000462279 MTUS2Q5JR59 1369 aa10.76□□□□□ -0.69
ERCC8-204ENST00000462279 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
ERCC8-204ENST00000462279 WASHC2CQ9Y4E1 1318 aa10.76□□□□□ -0.69
ERCC8-204ENST00000462279 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms