RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
SPTAN1-204ENST00000461855 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
SPTAN1-204ENST00000461855 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
SPTAN1-204ENST00000461855 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
SPTAN1-204ENST00000461855 CHIC1Q5VXU3 224 aa17.19■□□□□ 0.34
SPTAN1-204ENST00000461855 PRG4Q92954 1404 aaPredicted RBP17.19■□□□□ 0.34
SPTAN1-204ENST00000461855 EEA1Q15075 1411 aa17.14■□□□□ 0.33
SPTAN1-204ENST00000461855 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
SPTAN1-204ENST00000461855 IQGAP2Q13576 1575 aa17.09■□□□□ 0.33
SPTAN1-204ENST00000461855 UGGT2Q9NYU1 1516 aa17.06■□□□□ 0.32
SPTAN1-204ENST00000461855 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
SPTAN1-204ENST00000461855 CARMIL2Q6F5E8 1435 aa17.03■□□□□ 0.32
SPTAN1-204ENST00000461855 TNIKQ9UKE5 1360 aa17.01■□□□□ 0.31
SPTAN1-204ENST00000461855 PTPRGP23470 1445 aa16.99■□□□□ 0.31
SPTAN1-204ENST00000461855 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
SPTAN1-204ENST00000461855 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
SPTAN1-204ENST00000461855 KIAA0556O60303 1618 aa16.93■□□□□ 0.3
SPTAN1-204ENST00000461855 KIF21BO75037 1637 aa16.93■□□□□ 0.3
SPTAN1-204ENST00000461855 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
SPTAN1-204ENST00000461855 GOLGA3Q08378 1498 aa16.92■□□□□ 0.3
SPTAN1-204ENST00000461855 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
SPTAN1-204ENST00000461855 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
SPTAN1-204ENST00000461855 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
SPTAN1-204ENST00000461855 MAPKBP1O60336 1514 aa16.87■□□□□ 0.29
SPTAN1-204ENST00000461855 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
SPTAN1-204ENST00000461855 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
SPTAN1-204ENST00000461855 SAMD9Q5K651 1589 aa16.84■□□□□ 0.29
SPTAN1-204ENST00000461855 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
SPTAN1-204ENST00000461855 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
SPTAN1-204ENST00000461855 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
SPTAN1-204ENST00000461855 ABCA8O94911 1581 aa16.79■□□□□ 0.28
SPTAN1-204ENST00000461855 PLB1Q6P1J6 1458 aa16.79■□□□□ 0.28
SPTAN1-204ENST00000461855 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
SPTAN1-204ENST00000461855 ASXL2Q76L83 1435 aa16.74■□□□□ 0.27
SPTAN1-204ENST00000461855 UBTFP17480 764 aaKnown RBP16.74■□□□□ 0.27
SPTAN1-204ENST00000461855 KIF13AQ9H1H9 1805 aa16.74■□□□□ 0.27
SPTAN1-204ENST00000461855 DIP2BQ9P265 1576 aa16.73■□□□□ 0.27
SPTAN1-204ENST00000461855 FAM69CQ0P6D2 419 aa16.73■□□□□ 0.27
SPTAN1-204ENST00000461855 EFCAB5A4FU69 1503 aa16.73■□□□□ 0.27
SPTAN1-204ENST00000461855 ZCCHC11Q5TAX3 1644 aaKnown RBP16.7■□□□□ 0.26
SPTAN1-204ENST00000461855 FHOD3Q2V2M9 1422 aa16.69■□□□□ 0.26
SPTAN1-204ENST00000461855 GLI2P10070 1586 aa16.68■□□□□ 0.26
SPTAN1-204ENST00000461855 ATP10BO94823 1461 aa16.67■□□□□ 0.26
SPTAN1-204ENST00000461855 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
SPTAN1-204ENST00000461855 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
SPTAN1-204ENST00000461855 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
SPTAN1-204ENST00000461855 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
SPTAN1-204ENST00000461855 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
SPTAN1-204ENST00000461855 WDR7Q9Y4E6 1490 aa16.64■□□□□ 0.25
SPTAN1-204ENST00000461855 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
SPTAN1-204ENST00000461855 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
SPTAN1-204ENST00000461855 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
SPTAN1-204ENST00000461855 PPRC1Q5VV67 1664 aaKnown RBP16.54■□□□□ 0.24
SPTAN1-204ENST00000461855 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
SPTAN1-204ENST00000461855 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
SPTAN1-204ENST00000461855 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
SPTAN1-204ENST00000461855 CLIP1P30622 1438 aa16.51■□□□□ 0.23
SPTAN1-204ENST00000461855 CD109Q6YHK3 1445 aa16.5■□□□□ 0.23
SPTAN1-204ENST00000461855 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
SPTAN1-204ENST00000461855 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
SPTAN1-204ENST00000461855 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
SPTAN1-204ENST00000461855 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
SPTAN1-204ENST00000461855 CASKIN1Q8WXD9 1431 aa16.47■□□□□ 0.23
SPTAN1-204ENST00000461855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
SPTAN1-204ENST00000461855 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
SPTAN1-204ENST00000461855 HECW1Q76N89 1606 aa16.46■□□□□ 0.23
SPTAN1-204ENST00000461855 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
SPTAN1-204ENST00000461855 COL17A1Q9UMD9 1497 aaPredicted RBP16.45■□□□□ 0.22
SPTAN1-204ENST00000461855 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
SPTAN1-204ENST00000461855 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
SPTAN1-204ENST00000461855 KDM6BO15054 1643 aa16.44■□□□□ 0.22
SPTAN1-204ENST00000461855 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
SPTAN1-204ENST00000461855 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
SPTAN1-204ENST00000461855 PHLDB1Q86UU1 1377 aa16.4■□□□□ 0.22
SPTAN1-204ENST00000461855 LRRIQ1Q96JM4 1722 aa16.4■□□□□ 0.22
SPTAN1-204ENST00000461855 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
SPTAN1-204ENST00000461855 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
SPTAN1-204ENST00000461855 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
SPTAN1-204ENST00000461855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.39■□□□□ 0.21
SPTAN1-204ENST00000461855 CCDC18Q5T9S5 1454 aa16.38■□□□□ 0.21
SPTAN1-204ENST00000461855 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-204ENST00000461855 TROQ12816 1431 aaPredicted RBP16.37■□□□□ 0.21
SPTAN1-204ENST00000461855 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
SPTAN1-204ENST00000461855 NEO1Q92859 1461 aa16.35■□□□□ 0.21
SPTAN1-204ENST00000461855 PLCH2O75038 1416 aa16.32■□□□□ 0.2
SPTAN1-204ENST00000461855 TTC37Q6PGP7 1564 aa16.32■□□□□ 0.2
SPTAN1-204ENST00000461855 FANCAO15360 1455 aa16.28■□□□□ 0.2
SPTAN1-204ENST00000461855 AKNAQ7Z591 1439 aa16.28■□□□□ 0.2
SPTAN1-204ENST00000461855 KIF14Q15058 1648 aa16.27■□□□□ 0.2
SPTAN1-204ENST00000461855 VPS8Q8N3P4 1428 aa16.26■□□□□ 0.19
SPTAN1-204ENST00000461855 CFAP74Q9C0B2 1584 aa16.23■□□□□ 0.19
SPTAN1-204ENST00000461855 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
SPTAN1-204ENST00000461855 EFCAB2Q5VUJ9 269 aa16.23■□□□□ 0.19
SPTAN1-204ENST00000461855 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
SPTAN1-204ENST00000461855 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.18
SPTAN1-204ENST00000461855 MYO5CQ9NQX4 1742 aa16.2■□□□□ 0.18
SPTAN1-204ENST00000461855 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
SPTAN1-204ENST00000461855 MTUS2Q5JR59 1369 aa16.18■□□□□ 0.18
SPTAN1-204ENST00000461855 KDM4FA0A1W2PPD8 638 aa16.18■□□□□ 0.18
SPTAN1-204ENST00000461855 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms