RNA–Protein interactions for RNA: ENST00000461689.5

NEK4-203, Transcript of NIMA related kinase 4, humanhuman

TSL 5

Gene NEK4, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-203ENST00000461689 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
NEK4-203ENST00000461689 WDR62O43379 1518 aa20.41■□□□□ 0.86
NEK4-203ENST00000461689 EFCAB5A4FU69 1503 aa20.4■□□□□ 0.86
NEK4-203ENST00000461689 AQRO60306 1485 aaKnown RBP eCLIP20.39■□□□□ 0.853e-7■■■□□ 17
NEK4-203ENST00000461689 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
NEK4-203ENST00000461689 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
NEK4-203ENST00000461689 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
NEK4-203ENST00000461689 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
NEK4-203ENST00000461689 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
NEK4-203ENST00000461689 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
NEK4-203ENST00000461689 TIAM1Q13009 1591 aa20.32■□□□□ 0.84
NEK4-203ENST00000461689 FMN1Q68DA7 1419 aa20.29■□□□□ 0.84
NEK4-203ENST00000461689 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
NEK4-203ENST00000461689 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
NEK4-203ENST00000461689 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
NEK4-203ENST00000461689 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
NEK4-203ENST00000461689 LRRC9Q6ZRR7 1453 aa20.26■□□□□ 0.83
NEK4-203ENST00000461689 FYCO1Q9BQS8 1478 aa20.26■□□□□ 0.83
NEK4-203ENST00000461689 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
NEK4-203ENST00000461689 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
NEK4-203ENST00000461689 SAMD9Q5K651 1589 aa20.24■□□□□ 0.83
NEK4-203ENST00000461689 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
NEK4-203ENST00000461689 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
NEK4-203ENST00000461689 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
NEK4-203ENST00000461689 IQGAP2Q13576 1575 aa20.16■□□□□ 0.82
NEK4-203ENST00000461689 SNAPC4Q5SXM2 1469 aa20.16■□□□□ 0.82
NEK4-203ENST00000461689 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
NEK4-203ENST00000461689 PHLDB1Q86UU1 1377 aa20.12■□□□□ 0.81
NEK4-203ENST00000461689 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
NEK4-203ENST00000461689 KIAA0586Q9BVV6 1533 aa20.09■□□□□ 0.81
NEK4-203ENST00000461689 GRIN2AQ12879 1464 aa20.09■□□□□ 0.81
NEK4-203ENST00000461689 ITGAEP38570 1179 aa20.07■□□□□ 0.8
NEK4-203ENST00000461689 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
NEK4-203ENST00000461689 UGGT2Q9NYU1 1516 aa20.07■□□□□ 0.8
NEK4-203ENST00000461689 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
NEK4-203ENST00000461689 FAM50AQ14320 339 aaKnown RBP20.04■□□□□ 0.8
NEK4-203ENST00000461689 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
NEK4-203ENST00000461689 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
NEK4-203ENST00000461689 FBLN2P98095 1184 aa20■□□□□ 0.79
NEK4-203ENST00000461689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
NEK4-203ENST00000461689 LRRIQ1Q96JM4 1722 aa20■□□□□ 0.79
NEK4-203ENST00000461689 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
NEK4-203ENST00000461689 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
NEK4-203ENST00000461689 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
NEK4-203ENST00000461689 DISP1Q96F81 1524 aa19.96■□□□□ 0.79
NEK4-203ENST00000461689 KIAA0556O60303 1618 aa19.93■□□□□ 0.78
NEK4-203ENST00000461689 EHBP1L1Q8N3D4 1523 aa19.93■□□□□ 0.78
NEK4-203ENST00000461689 FGD6Q6ZV73 1430 aa19.93■□□□□ 0.78
NEK4-203ENST00000461689 NCOA2Q15596 1464 aa19.93■□□□□ 0.78
NEK4-203ENST00000461689 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
NEK4-203ENST00000461689 SETD5Q9C0A6 1442 aa19.92■□□□□ 0.78
NEK4-203ENST00000461689 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
NEK4-203ENST00000461689 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
NEK4-203ENST00000461689 SUPT6HQ7KZ85 1726 aaKnown RBP19.91■□□□□ 0.78
NEK4-203ENST00000461689 NUP160Q12769 1436 aa19.91■□□□□ 0.78
NEK4-203ENST00000461689 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
NEK4-203ENST00000461689 MYOM3Q5VTT5 1437 aa19.89■□□□□ 0.77
NEK4-203ENST00000461689 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
NEK4-203ENST00000461689 CARMIL2Q6F5E8 1435 aa19.85■□□□□ 0.77
NEK4-203ENST00000461689 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
NEK4-203ENST00000461689 CDK13Q14004 1512 aaKnown RBP19.84■□□□□ 0.77
NEK4-203ENST00000461689 ZNF316A6NFI3 1004 aaPredicted RBP19.83■□□□□ 0.76
NEK4-203ENST00000461689 ARID3CA6NKF2 412 aa19.83■□□□□ 0.76
NEK4-203ENST00000461689 CDK11AQ9UQ88 783 aaPredicted RBP19.81■□□□□ 0.76
NEK4-203ENST00000461689 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
NEK4-203ENST00000461689 NUP153P49790 1475 aaKnown RBP19.79■□□□□ 0.76
NEK4-203ENST00000461689 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
NEK4-203ENST00000461689 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
NEK4-203ENST00000461689 MIA2Q96PC5 1412 aa19.74■□□□□ 0.75
NEK4-203ENST00000461689 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
NEK4-203ENST00000461689 TCOF1Q13428 1488 aaKnown RBP19.73■□□□□ 0.75
NEK4-203ENST00000461689 PLB1Q6P1J6 1458 aa19.73■□□□□ 0.75
NEK4-203ENST00000461689 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
NEK4-203ENST00000461689 MAPKBP1O60336 1514 aa19.7■□□□□ 0.74
NEK4-203ENST00000461689 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
NEK4-203ENST00000461689 TROQ12816 1431 aaPredicted RBP19.66■□□□□ 0.74
NEK4-203ENST00000461689 NAIPQ13075 1403 aa19.66■□□□□ 0.74
NEK4-203ENST00000461689 CHD1O14646 1710 aa19.64■□□□□ 0.73
NEK4-203ENST00000461689 ABCA8O94911 1581 aa19.62■□□□□ 0.73
NEK4-203ENST00000461689 PTPRGP23470 1445 aa19.62■□□□□ 0.73
NEK4-203ENST00000461689 CHIC2Q9UKJ5 165 aa19.62■□□□□ 0.73
NEK4-203ENST00000461689 PLEKHD1A6NEE1 506 aa19.61■□□□□ 0.73
NEK4-203ENST00000461689 UACAQ9BZF9 1416 aa19.6■□□□□ 0.73
NEK4-203ENST00000461689 RRP7BPQ9NSQ0 103 aa19.6■□□□□ 0.73
NEK4-203ENST00000461689 TIMELESSQ9UNS1 1208 aa19.6■□□□□ 0.73
NEK4-203ENST00000461689 SIN3AQ96ST3 1273 aa19.58■□□□□ 0.73
NEK4-203ENST00000461689 AKNAQ7Z591 1439 aa19.58■□□□□ 0.73
NEK4-203ENST00000461689 ATP10BO94823 1461 aa19.57■□□□□ 0.72
NEK4-203ENST00000461689 NEUROD1Q13562 356 aa19.57■□□□□ 0.72
NEK4-203ENST00000461689 CFDP1Q9UEE9 299 aaPredicted RBP19.56■□□□□ 0.72
NEK4-203ENST00000461689 ZNF644Q9H582 1327 aaPredicted RBP19.55■□□□□ 0.72
NEK4-203ENST00000461689 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
NEK4-203ENST00000461689 DAPK1P53355 1430 aa19.53■□□□□ 0.72
NEK4-203ENST00000461689 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
NEK4-203ENST00000461689 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
NEK4-203ENST00000461689 ROCK1Q13464 1354 aa19.52■□□□□ 0.72
NEK4-203ENST00000461689 ACIN1Q9UKV3 1341 aaKnown RBP19.52■□□□□ 0.71
NEK4-203ENST00000461689 ABCC5O15440 1437 aa19.52■□□□□ 0.71
NEK4-203ENST00000461689 GCC2Q8IWJ2 1684 aa19.51■□□□□ 0.71
NEK4-203ENST00000461689 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms