RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 RUSC2Q8N2Y8 1516 aa30.64■■■□□ 2.5
COL1A2-202ENST00000461525 CUL7Q14999 1698 aa30.6■■■□□ 2.49
COL1A2-202ENST00000461525 KIAA0586Q9BVV6 1533 aa30.55■■■□□ 2.48
COL1A2-202ENST00000461525 CARMIL1Q5VZK9 1371 aa30.53■■■□□ 2.48
COL1A2-202ENST00000461525 NPM1P06748 294 aaKnown RBP eCLIP30.32■■■□□ 2.44
COL1A2-202ENST00000461525 CARMIL2Q6F5E8 1435 aa30.27■■■□□ 2.44
COL1A2-202ENST00000461525 RAPGEF2Q9Y4G8 1499 aa30.26■■■□□ 2.44
COL1A2-202ENST00000461525 IQGAP2Q13576 1575 aa30.25■■■□□ 2.43
COL1A2-202ENST00000461525 PTPRGP23470 1445 aa30.24■■■□□ 2.43
COL1A2-202ENST00000461525 ADCY10Q96PN6 1610 aa30.24■■■□□ 2.43
COL1A2-202ENST00000461525 TNIKQ9UKE5 1360 aa30.21■■■□□ 2.43
COL1A2-202ENST00000461525 MAPKBP1O60336 1514 aa30.2■■■□□ 2.42
COL1A2-202ENST00000461525 TTBK1Q5TCY1 1321 aaPredicted RBP30.2■■■□□ 2.42
COL1A2-202ENST00000461525 ABCC10Q5T3U5 1492 aa30.17■■■□□ 2.42
COL1A2-202ENST00000461525 FAM69CQ0P6D2 419 aa30.15■■■□□ 2.42
COL1A2-202ENST00000461525 KIF13AQ9H1H9 1805 aa30.12■■■□□ 2.41
COL1A2-202ENST00000461525 DISP1Q96F81 1524 aa30.11■■■□□ 2.41
COL1A2-202ENST00000461525 UGGT2Q9NYU1 1516 aa30.08■■■□□ 2.41
COL1A2-202ENST00000461525 DIP2BQ9P265 1576 aa30.06■■■□□ 2.4
COL1A2-202ENST00000461525 ABCC2Q92887 1545 aa30.04■■■□□ 2.4
COL1A2-202ENST00000461525 UACAQ9BZF9 1416 aa30.02■■■□□ 2.4
COL1A2-202ENST00000461525 UHRF1BP1LA0JNW5 1464 aa30■■■□□ 2.39
COL1A2-202ENST00000461525 PRXQ9BXM0 1461 aa30■■■□□ 2.39
COL1A2-202ENST00000461525 KIAA0556O60303 1618 aa29.97■■■□□ 2.39
COL1A2-202ENST00000461525 ASXL2Q76L83 1435 aa29.92■■■□□ 2.38
COL1A2-202ENST00000461525 PLB1Q6P1J6 1458 aa29.91■■■□□ 2.38
COL1A2-202ENST00000461525 CTTNBP2Q8WZ74 1663 aa29.89■■■□□ 2.38
COL1A2-202ENST00000461525 GOLGA3Q08378 1498 aa29.89■■■□□ 2.38
COL1A2-202ENST00000461525 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
COL1A2-202ENST00000461525 KDM5BQ9UGL1 1544 aa29.86■■■□□ 2.37
COL1A2-202ENST00000461525 CSRNP3Q8WYN3 585 aa29.84■■■□□ 2.37
COL1A2-202ENST00000461525 GLI2P10070 1586 aa29.77■■■□□ 2.36
COL1A2-202ENST00000461525 EEA1Q15075 1411 aa29.76■■■□□ 2.35
COL1A2-202ENST00000461525 KDM6BO15054 1643 aa29.74■■■□□ 2.35
COL1A2-202ENST00000461525 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
COL1A2-202ENST00000461525 TSPOAP1O95153 1857 aa29.74■■■□□ 2.35
COL1A2-202ENST00000461525 EPRSP07814 1512 aaKnown RBP29.73■■■□□ 2.35
COL1A2-202ENST00000461525 ABCA8O94911 1581 aa29.69■■■□□ 2.34
COL1A2-202ENST00000461525 WDR7Q9Y4E6 1490 aa29.67■■■□□ 2.34
COL1A2-202ENST00000461525 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
COL1A2-202ENST00000461525 P3H3Q8IVL6 736 aa29.64■■■□□ 2.34
COL1A2-202ENST00000461525 PPRC1Q5VV67 1664 aaKnown RBP29.6■■■□□ 2.33
COL1A2-202ENST00000461525 MAP3K4Q9Y6R4 1608 aa29.57■■■□□ 2.32
COL1A2-202ENST00000461525 TEX14Q8IWB6 1497 aa29.57■■■□□ 2.32
COL1A2-202ENST00000461525 SAMD9Q5K651 1589 aa29.54■■■□□ 2.32
COL1A2-202ENST00000461525 KCNH8Q96L42 1107 aa29.52■■■□□ 2.32
COL1A2-202ENST00000461525 ARID3CA6NKF2 412 aa29.51■■■□□ 2.31
COL1A2-202ENST00000461525 RANGAP1P46060 587 aaPredicted RBP29.49■■■□□ 2.31
COL1A2-202ENST00000461525 COL17A1Q9UMD9 1497 aaPredicted RBP29.47■■■□□ 2.31
COL1A2-202ENST00000461525 CD109Q6YHK3 1445 aa29.46■■■□□ 2.31
COL1A2-202ENST00000461525 ATP10BO94823 1461 aa29.46■■■□□ 2.31
COL1A2-202ENST00000461525 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
COL1A2-202ENST00000461525 KIF21BO75037 1637 aa29.45■■■□□ 2.3
COL1A2-202ENST00000461525 MAGI3Q5TCQ9 1506 aa29.42■■■□□ 2.3
COL1A2-202ENST00000461525 FHOD3Q2V2M9 1422 aa29.41■■■□□ 2.3
COL1A2-202ENST00000461525 RAPGEF6Q8TEU7 1601 aa29.39■■■□□ 2.3
COL1A2-202ENST00000461525 KDM4FA0A1W2PPD8 638 aa29.39■■■□□ 2.3
COL1A2-202ENST00000461525 CFAP43Q8NDM7 1665 aa29.39■■■□□ 2.3
COL1A2-202ENST00000461525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.35■■■□□ 2.29
COL1A2-202ENST00000461525 HNRNPUL2Q1KMD3 747 aaKnown RBP29.35■■■□□ 2.29
COL1A2-202ENST00000461525 NUP153P49790 1475 aaKnown RBP29.33■■■□□ 2.29
COL1A2-202ENST00000461525 EFCAB5A4FU69 1503 aa29.33■■■□□ 2.29
COL1A2-202ENST00000461525 EHMT2Q96KQ7 1210 aa29.3■■■□□ 2.28
COL1A2-202ENST00000461525 UBTFP17480 764 aaKnown RBP29.29■■■□□ 2.28
COL1A2-202ENST00000461525 ABCA9Q8IUA7 1624 aa29.23■■■□□ 2.27
COL1A2-202ENST00000461525 ADGRL1O94910 1474 aa29.22■■■□□ 2.27
COL1A2-202ENST00000461525 PLEKHD1A6NEE1 506 aa29.18■■■□□ 2.26
COL1A2-202ENST00000461525 PHLDB1Q86UU1 1377 aa29.17■■■□□ 2.26
COL1A2-202ENST00000461525 ARAP3Q8WWN8 1544 aa29.17■■■□□ 2.26
COL1A2-202ENST00000461525 NEO1Q92859 1461 aa29.11■■■□□ 2.25
COL1A2-202ENST00000461525 FMN1Q68DA7 1419 aa29.1■■■□□ 2.25
COL1A2-202ENST00000461525 ARHGAP35Q9NRY4 1499 aa29.1■■■□□ 2.25
COL1A2-202ENST00000461525 CDK13Q14004 1512 aaKnown RBP29.06■■■□□ 2.24
COL1A2-202ENST00000461525 ATP1B4Q9UN42 357 aaPredicted RBP29.04■■■□□ 2.24
COL1A2-202ENST00000461525 RAPGEF3O95398 923 aa29.03■■■□□ 2.24
COL1A2-202ENST00000461525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.99■■■□□ 2.23
COL1A2-202ENST00000461525 HECW1Q76N89 1606 aa28.99■■■□□ 2.23
COL1A2-202ENST00000461525 FANCAO15360 1455 aa28.96■■■□□ 2.23
COL1A2-202ENST00000461525 TTC37Q6PGP7 1564 aa28.94■■■□□ 2.22
COL1A2-202ENST00000461525 AKNAQ7Z591 1439 aa28.94■■■□□ 2.22
COL1A2-202ENST00000461525 CDK11AQ9UQ88 783 aaPredicted RBP28.93■■■□□ 2.22
COL1A2-202ENST00000461525 DENND4BO75064 1496 aaPredicted RBP28.92■■■□□ 2.22
COL1A2-202ENST00000461525 FRMPD1Q5SYB0 1578 aa28.92■■■□□ 2.22
COL1A2-202ENST00000461525 CFAP74Q9C0B2 1584 aa28.9■■■□□ 2.22
COL1A2-202ENST00000461525 PLCH2O75038 1416 aa28.85■■■□□ 2.21
COL1A2-202ENST00000461525 TROQ12816 1431 aaPredicted RBP28.83■■■□□ 2.21
COL1A2-202ENST00000461525 CLIP1P30622 1438 aa28.81■■■□□ 2.2
COL1A2-202ENST00000461525 ARID4BQ4LE39 1312 aaPredicted RBP28.8■■■□□ 2.2
COL1A2-202ENST00000461525 CASKIN1Q8WXD9 1431 aa28.79■■■□□ 2.2
COL1A2-202ENST00000461525 ARHGEF40Q8TER5 1519 aa28.79■■■□□ 2.2
COL1A2-202ENST00000461525 RICTORQ6R327 1708 aa28.77■■■□□ 2.2
COL1A2-202ENST00000461525 KIF14Q15058 1648 aa28.77■■■□□ 2.2
COL1A2-202ENST00000461525 EFCAB2Q5VUJ9 269 aa28.77■■■□□ 2.2
COL1A2-202ENST00000461525 SCAPERQ9BY12 1400 aa28.77■■■□□ 2.2
COL1A2-202ENST00000461525 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
COL1A2-202ENST00000461525 ZMYM4Q5VZL5 1548 aa28.74■■■□□ 2.19
COL1A2-202ENST00000461525 CCDC18Q5T9S5 1454 aa28.74■■■□□ 2.19
COL1A2-202ENST00000461525 POGZQ7Z3K3 1410 aa28.73■■■□□ 2.19
COL1A2-202ENST00000461525 HECW2Q9P2P5 1572 aa28.72■■■□□ 2.19
COL1A2-202ENST00000461525 MAGI2Q86UL8 1455 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms