RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
NUP50-212ENST00000461194 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
NUP50-212ENST00000461194 NCAPD3P42695 1498 aa13□□□□□ -0.33
NUP50-212ENST00000461194 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
NUP50-212ENST00000461194 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
NUP50-212ENST00000461194 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
NUP50-212ENST00000461194 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
NUP50-212ENST00000461194 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
NUP50-212ENST00000461194 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
NUP50-212ENST00000461194 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
NUP50-212ENST00000461194 NUBP1P53384 320 aa12.94□□□□□ -0.34
NUP50-212ENST00000461194 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
NUP50-212ENST00000461194 PKD2Q13563 968 aa12.93□□□□□ -0.34
NUP50-212ENST00000461194 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
NUP50-212ENST00000461194 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
NUP50-212ENST00000461194 HMGXB3Q12766 1538 aa12.89□□□□□ -0.35
NUP50-212ENST00000461194 PEG3Q9GZU2 1588 aa12.89□□□□□ -0.35
NUP50-212ENST00000461194 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
NUP50-212ENST00000461194 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
NUP50-212ENST00000461194 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
NUP50-212ENST00000461194 GSE1Q14687 1217 aa12.84□□□□□ -0.35
NUP50-212ENST00000461194 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
NUP50-212ENST00000461194 POTEHQ6S545 545 aa12.8□□□□□ -0.36
NUP50-212ENST00000461194 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
NUP50-212ENST00000461194 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.37
NUP50-212ENST00000461194 WIZO95785 1651 aa12.73□□□□□ -0.37
NUP50-212ENST00000461194 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
NUP50-212ENST00000461194 RGL2O15211 777 aa12.7□□□□□ -0.38
NUP50-212ENST00000461194 PAK3O75914 559 aaPredicted RBP12.69□□□□□ -0.38
NUP50-212ENST00000461194 PYGBP11216 843 aa12.68□□□□□ -0.38
NUP50-212ENST00000461194 NESP48681 1621 aa12.67□□□□□ -0.38
NUP50-212ENST00000461194 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
NUP50-212ENST00000461194 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
NUP50-212ENST00000461194 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
NUP50-212ENST00000461194 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
NUP50-212ENST00000461194 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
NUP50-212ENST00000461194 LAMC3Q9Y6N6 1575 aa12.62□□□□□ -0.39
NUP50-212ENST00000461194 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
NUP50-212ENST00000461194 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
NUP50-212ENST00000461194 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
NUP50-212ENST00000461194 HAX1O00165 279 aa12.59□□□□□ -0.39
NUP50-212ENST00000461194 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.4
NUP50-212ENST00000461194 PDS5BQ9NTI5 1447 aa12.58□□□□□ -0.4
NUP50-212ENST00000461194 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
NUP50-212ENST00000461194 CUX2O14529 1486 aa12.56□□□□□ -0.4
NUP50-212ENST00000461194 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
NUP50-212ENST00000461194 CFTRP13569 1480 aa12.52□□□□□ -0.41
NUP50-212ENST00000461194 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
NUP50-212ENST00000461194 MAP3K13O43283 966 aa12.5□□□□□ -0.41
NUP50-212ENST00000461194 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
NUP50-212ENST00000461194 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
NUP50-212ENST00000461194 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
NUP50-212ENST00000461194 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
NUP50-212ENST00000461194 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
NUP50-212ENST00000461194 EVX2Q03828 476 aa12.48□□□□□ -0.41
NUP50-212ENST00000461194 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
NUP50-212ENST00000461194 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
NUP50-212ENST00000461194 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
NUP50-212ENST00000461194 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
NUP50-212ENST00000461194 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
NUP50-212ENST00000461194 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
NUP50-212ENST00000461194 IFNL1Q8IU54 200 aa12.44□□□□□ -0.42
NUP50-212ENST00000461194 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
NUP50-212ENST00000461194 CEP164Q9UPV0 1460 aa12.43□□□□□ -0.42
NUP50-212ENST00000461194 SGIP1Q9BQI5 828 aa12.42□□□□□ -0.42
NUP50-212ENST00000461194 STK25O00506 426 aa12.41□□□□□ -0.42
NUP50-212ENST00000461194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
NUP50-212ENST00000461194 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
NUP50-212ENST00000461194 WDR62O43379 1518 aa12.39□□□□□ -0.43
NUP50-212ENST00000461194 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
NUP50-212ENST00000461194 PDAP1Q13442 181 aaKnown RBP12.39□□□□□ -0.43
NUP50-212ENST00000461194 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
NUP50-212ENST00000461194 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
NUP50-212ENST00000461194 PSEN1P49768 467 aa12.37□□□□□ -0.43
NUP50-212ENST00000461194 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
NUP50-212ENST00000461194 STK24Q9Y6E0 443 aa12.36□□□□□ -0.43
NUP50-212ENST00000461194 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
NUP50-212ENST00000461194 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
NUP50-212ENST00000461194 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
NUP50-212ENST00000461194 PRDM2Q13029 1718 aa12.29□□□□□ -0.44
NUP50-212ENST00000461194 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
NUP50-212ENST00000461194 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
NUP50-212ENST00000461194 PAXIP1Q6ZW49 1069 aaPredicted RBP12.28□□□□□ -0.44
NUP50-212ENST00000461194 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
NUP50-212ENST00000461194 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
NUP50-212ENST00000461194 CLCN6P51797 869 aa12.26□□□□□ -0.45
NUP50-212ENST00000461194 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
NUP50-212ENST00000461194 TMEM106CQ9BVX2 250 aa12.25□□□□□ -0.45
NUP50-212ENST00000461194 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
NUP50-212ENST00000461194 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
NUP50-212ENST00000461194 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
NUP50-212ENST00000461194 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
NUP50-212ENST00000461194 GABBR2O75899 941 aa12.23□□□□□ -0.45
NUP50-212ENST00000461194 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
NUP50-212ENST00000461194 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
NUP50-212ENST00000461194 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
NUP50-212ENST00000461194 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
NUP50-212ENST00000461194 TIE1P35590 1138 aa12.18□□□□□ -0.46
NUP50-212ENST00000461194 TTLL13PA6NNM8 815 aa12.17□□□□□ -0.46
NUP50-212ENST00000461194 EFCAB3Q8N7B9 438 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms