RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 EEA1Q15075 1411 aa22.99■■□□□ 1.27
CHRD-209ENST00000461120 CUL7Q14999 1698 aa22.98■■□□□ 1.27
CHRD-209ENST00000461120 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
CHRD-209ENST00000461120 KDM6BO15054 1643 aa22.93■■□□□ 1.26
CHRD-209ENST00000461120 FBXO41Q8TF61 875 aa22.92■■□□□ 1.26
CHRD-209ENST00000461120 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
CHRD-209ENST00000461120 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
CHRD-209ENST00000461120 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CHRD-209ENST00000461120 FAM69CQ0P6D2 419 aa22.89■■□□□ 1.25
CHRD-209ENST00000461120 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
CHRD-209ENST00000461120 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
CHRD-209ENST00000461120 RAPGEF2Q9Y4G8 1499 aa22.84■■□□□ 1.25
CHRD-209ENST00000461120 NUP160Q12769 1436 aa22.81■■□□□ 1.24
CHRD-209ENST00000461120 ABCC10Q5T3U5 1492 aa22.8■■□□□ 1.24
CHRD-209ENST00000461120 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
CHRD-209ENST00000461120 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
CHRD-209ENST00000461120 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
CHRD-209ENST00000461120 KIF21BO75037 1637 aa22.73■■□□□ 1.23
CHRD-209ENST00000461120 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
CHRD-209ENST00000461120 ADGRL1O94910 1474 aa22.72■■□□□ 1.23
CHRD-209ENST00000461120 DIP2BQ9P265 1576 aa22.7■■□□□ 1.22
CHRD-209ENST00000461120 KIAA0586Q9BVV6 1533 aa22.67■■□□□ 1.22
CHRD-209ENST00000461120 MAPKBP1O60336 1514 aa22.65■■□□□ 1.22
CHRD-209ENST00000461120 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
CHRD-209ENST00000461120 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
CHRD-209ENST00000461120 CTTNBP2Q8WZ74 1663 aa22.6■■□□□ 1.21
CHRD-209ENST00000461120 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
CHRD-209ENST00000461120 EHMT2Q96KQ7 1210 aa22.58■■□□□ 1.21
CHRD-209ENST00000461120 JPH4Q96JJ6 628 aa22.57■■□□□ 1.2
CHRD-209ENST00000461120 SOCS7O14512 581 aa22.56■■□□□ 1.2
CHRD-209ENST00000461120 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
CHRD-209ENST00000461120 PRG4Q92954 1404 aaPredicted RBP22.5■■□□□ 1.19
CHRD-209ENST00000461120 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
CHRD-209ENST00000461120 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
CHRD-209ENST00000461120 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
CHRD-209ENST00000461120 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
CHRD-209ENST00000461120 TNIKQ9UKE5 1360 aa22.39■■□□□ 1.18
CHRD-209ENST00000461120 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.18
CHRD-209ENST00000461120 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
CHRD-209ENST00000461120 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
CHRD-209ENST00000461120 SAMD9Q5K651 1589 aa22.34■■□□□ 1.17
CHRD-209ENST00000461120 DISP3Q9P2K9 1392 aa22.33■■□□□ 1.17
CHRD-209ENST00000461120 ILDR2Q71H61 639 aa22.31■■□□□ 1.16
CHRD-209ENST00000461120 EFCAB5A4FU69 1503 aa22.3■■□□□ 1.16
CHRD-209ENST00000461120 P3H3Q8IVL6 736 aa22.28■■□□□ 1.16
CHRD-209ENST00000461120 PTPRGP23470 1445 aa22.28■■□□□ 1.16
CHRD-209ENST00000461120 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
CHRD-209ENST00000461120 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
CHRD-209ENST00000461120 TTBK1Q5TCY1 1321 aaPredicted RBP22.24■■□□□ 1.15
CHRD-209ENST00000461120 CLIP1P30622 1438 aa22.23■■□□□ 1.15
CHRD-209ENST00000461120 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
CHRD-209ENST00000461120 GLI2P10070 1586 aa22.21■■□□□ 1.15
CHRD-209ENST00000461120 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
CHRD-209ENST00000461120 TEX14Q8IWB6 1497 aa22.16■■□□□ 1.14
CHRD-209ENST00000461120 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
CHRD-209ENST00000461120 UACAQ9BZF9 1416 aa22.14■■□□□ 1.14
CHRD-209ENST00000461120 COL17A1Q9UMD9 1497 aaPredicted RBP22.13■■□□□ 1.13
CHRD-209ENST00000461120 ABCA8O94911 1581 aa22.12■■□□□ 1.13
CHRD-209ENST00000461120 UHRF1BP1LA0JNW5 1464 aa22.1■■□□□ 1.13
CHRD-209ENST00000461120 ABCC2Q92887 1545 aa22.1■■□□□ 1.13
CHRD-209ENST00000461120 FMN1Q68DA7 1419 aa22.08■■□□□ 1.13
CHRD-209ENST00000461120 ASXL2Q76L83 1435 aa22.08■■□□□ 1.13
CHRD-209ENST00000461120 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
CHRD-209ENST00000461120 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
CHRD-209ENST00000461120 SPATA31D1Q6ZQQ2 1576 aa22.01■■□□□ 1.11
CHRD-209ENST00000461120 CERKQ8TCT0 537 aa22.01■■□□□ 1.11
CHRD-209ENST00000461120 KDM5BQ9UGL1 1544 aa22■■□□□ 1.11
CHRD-209ENST00000461120 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
CHRD-209ENST00000461120 CASKIN1Q8WXD9 1431 aa21.97■■□□□ 1.11
CHRD-209ENST00000461120 PCF11O94913 1555 aaKnown RBP21.96■■□□□ 1.11
CHRD-209ENST00000461120 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.1
CHRD-209ENST00000461120 HECW1Q76N89 1606 aa21.95■■□□□ 1.1
CHRD-209ENST00000461120 ATP10BO94823 1461 aa21.94■■□□□ 1.1
CHRD-209ENST00000461120 ARID3CA6NKF2 412 aa21.93■■□□□ 1.1
CHRD-209ENST00000461120 EPRSP07814 1512 aaKnown RBP21.93■■□□□ 1.1
CHRD-209ENST00000461120 PTPRMP28827 1452 aa21.93■■□□□ 1.1
CHRD-209ENST00000461120 FYCO1Q9BQS8 1478 aa21.92■■□□□ 1.1
CHRD-209ENST00000461120 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
CHRD-209ENST00000461120 VPS8Q8N3P4 1428 aa21.91■■□□□ 1.1
CHRD-209ENST00000461120 CDK13Q14004 1512 aaKnown RBP21.86■■□□□ 1.09
CHRD-209ENST00000461120 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
CHRD-209ENST00000461120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
CHRD-209ENST00000461120 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
CHRD-209ENST00000461120 ADAMTSL3P82987 1691 aa21.84■■□□□ 1.09
CHRD-209ENST00000461120 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
CHRD-209ENST00000461120 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
CHRD-209ENST00000461120 PLEKHD1A6NEE1 506 aa21.76■■□□□ 1.07
CHRD-209ENST00000461120 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
CHRD-209ENST00000461120 CFAP43Q8NDM7 1665 aa21.74■■□□□ 1.07
CHRD-209ENST00000461120 MAGI3Q5TCQ9 1506 aa21.72■■□□□ 1.07
CHRD-209ENST00000461120 KCNH8Q96L42 1107 aa21.71■■□□□ 1.07
CHRD-209ENST00000461120 CD109Q6YHK3 1445 aa21.71■■□□□ 1.07
CHRD-209ENST00000461120 HSPA2P54652 639 aa21.7■■□□□ 1.06
CHRD-209ENST00000461120 TROQ12816 1431 aaPredicted RBP21.7■■□□□ 1.06
CHRD-209ENST00000461120 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
CHRD-209ENST00000461120 BCORL1Q5H9F3 1711 aa21.69■■□□□ 1.06
CHRD-209ENST00000461120 MAP3K1Q13233 1512 aa21.68■■□□□ 1.06
CHRD-209ENST00000461120 MADDQ8WXG6 1647 aa21.68■■□□□ 1.06
CHRD-209ENST00000461120 ARID4BQ4LE39 1312 aaPredicted RBP21.66■■□□□ 1.06
CHRD-209ENST00000461120 APLP2Q06481 763 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms