RNA–Protein interactions for RNA: ENST00000460610.1

RAF1-206, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 3

Gene RAF1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-206ENST00000460610 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
RAF1-206ENST00000460610 PLPPR3Q6T4P5 718 aa13.35□□□□□ -0.27
RAF1-206ENST00000460610 TSPOAP1O95153 1857 aa13.35□□□□□ -0.27
RAF1-206ENST00000460610 DIP2BQ9P265 1576 aa13.34□□□□□ -0.27
RAF1-206ENST00000460610 KDM6BO15054 1643 aa13.31□□□□□ -0.28
RAF1-206ENST00000460610 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
RAF1-206ENST00000460610 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
RAF1-206ENST00000460610 MAPKBP1O60336 1514 aa13.29□□□□□ -0.28
RAF1-206ENST00000460610 ADCY10Q96PN6 1610 aa13.28□□□□□ -0.28
RAF1-206ENST00000460610 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
RAF1-206ENST00000460610 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
RAF1-206ENST00000460610 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
RAF1-206ENST00000460610 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
RAF1-206ENST00000460610 ERICH3Q5RHP9 1530 aa13.2□□□□□ -0.3
RAF1-206ENST00000460610 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
RAF1-206ENST00000460610 PPRC1Q5VV67 1664 aaKnown RBP13.19□□□□□ -0.3
RAF1-206ENST00000460610 ADGRL1O94910 1474 aa13.19□□□□□ -0.3
RAF1-206ENST00000460610 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
RAF1-206ENST00000460610 HECW2Q9P2P5 1572 aa13.19□□□□□ -0.3
RAF1-206ENST00000460610 TOP2BQ02880 1626 aa13.17□□□□□ -0.3
RAF1-206ENST00000460610 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
RAF1-206ENST00000460610 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
RAF1-206ENST00000460610 GLI2P10070 1586 aa13.06□□□□□ -0.32
RAF1-206ENST00000460610 KIAA0586Q9BVV6 1533 aa13.05□□□□□ -0.32
RAF1-206ENST00000460610 CUL7Q14999 1698 aa13.05□□□□□ -0.32
RAF1-206ENST00000460610 ASXL2Q76L83 1435 aa13.05□□□□□ -0.32
RAF1-206ENST00000460610 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
RAF1-206ENST00000460610 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
RAF1-206ENST00000460610 PTPRGP23470 1445 aa13.02□□□□□ -0.33
RAF1-206ENST00000460610 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.33
RAF1-206ENST00000460610 ADRA2BP18089 450 aa13.01□□□□□ -0.33
RAF1-206ENST00000460610 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
RAF1-206ENST00000460610 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
RAF1-206ENST00000460610 IGF1RP08069 1367 aa12.97□□□□□ -0.33
RAF1-206ENST00000460610 MSH5O43196 834 aa12.97□□□□□ -0.33
RAF1-206ENST00000460610 EPRSP07814 1512 aaKnown RBP12.97□□□□□ -0.33
RAF1-206ENST00000460610 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
RAF1-206ENST00000460610 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
RAF1-206ENST00000460610 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
RAF1-206ENST00000460610 SUPT5HO00267 1087 aaKnown RBP12.92□□□□□ -0.34
RAF1-206ENST00000460610 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
RAF1-206ENST00000460610 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
RAF1-206ENST00000460610 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
RAF1-206ENST00000460610 KIF21BO75037 1637 aa12.9□□□□□ -0.34
RAF1-206ENST00000460610 TEX14Q8IWB6 1497 aa12.9□□□□□ -0.34
RAF1-206ENST00000460610 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
RAF1-206ENST00000460610 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
RAF1-206ENST00000460610 IQGAP2Q13576 1575 aa12.86□□□□□ -0.35
RAF1-206ENST00000460610 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
RAF1-206ENST00000460610 CARMIL1Q5VZK9 1371 aa12.83□□□□□ -0.36
RAF1-206ENST00000460610 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
RAF1-206ENST00000460610 ADAMTSL3P82987 1691 aa12.82□□□□□ -0.36
RAF1-206ENST00000460610 CFAP43Q8NDM7 1665 aa12.81□□□□□ -0.36
RAF1-206ENST00000460610 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
RAF1-206ENST00000460610 MAGI3Q5TCQ9 1506 aa12.81□□□□□ -0.36
RAF1-206ENST00000460610 PTPRMP28827 1452 aa12.8□□□□□ -0.36
RAF1-206ENST00000460610 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
RAF1-206ENST00000460610 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
RAF1-206ENST00000460610 UGGT2Q9NYU1 1516 aa12.78□□□□□ -0.36
RAF1-206ENST00000460610 KIAA0556O60303 1618 aa12.77□□□□□ -0.36
RAF1-206ENST00000460610 KCNH8Q96L42 1107 aa12.76□□□□□ -0.37
RAF1-206ENST00000460610 PCF11O94913 1555 aaKnown RBP12.75□□□□□ -0.37
RAF1-206ENST00000460610 BCORL1Q5H9F3 1711 aa12.73□□□□□ -0.37
RAF1-206ENST00000460610 MADDQ8WXG6 1647 aa12.73□□□□□ -0.37
RAF1-206ENST00000460610 ARAP3Q8WWN8 1544 aa12.72□□□□□ -0.37
RAF1-206ENST00000460610 ABCA8O94911 1581 aa12.71□□□□□ -0.37
RAF1-206ENST00000460610 SOCS7O14512 581 aa12.69□□□□□ -0.38
RAF1-206ENST00000460610 HSPA2P54652 639 aa12.69□□□□□ -0.38
RAF1-206ENST00000460610 RAPGEF3O95398 923 aa12.68□□□□□ -0.38
RAF1-206ENST00000460610 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
RAF1-206ENST00000460610 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
RAF1-206ENST00000460610 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
RAF1-206ENST00000460610 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
RAF1-206ENST00000460610 DISP3Q9P2K9 1392 aa12.65□□□□□ -0.38
RAF1-206ENST00000460610 CTTNBP2Q8WZ74 1663 aa12.64□□□□□ -0.39
RAF1-206ENST00000460610 SIGLEC1Q9BZZ2 1709 aa12.63□□□□□ -0.39
RAF1-206ENST00000460610 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
RAF1-206ENST00000460610 ARID3CA6NKF2 412 aa12.62□□□□□ -0.39
RAF1-206ENST00000460610 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
RAF1-206ENST00000460610 ARID4BQ4LE39 1312 aaPredicted RBP12.61□□□□□ -0.39
RAF1-206ENST00000460610 ATP10BO94823 1461 aa12.6□□□□□ -0.39
RAF1-206ENST00000460610 KCNA4P22459 653 aa12.59□□□□□ -0.39
RAF1-206ENST00000460610 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
RAF1-206ENST00000460610 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
RAF1-206ENST00000460610 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
RAF1-206ENST00000460610 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
RAF1-206ENST00000460610 NEO1Q92859 1461 aa12.56□□□□□ -0.4
RAF1-206ENST00000460610 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
RAF1-206ENST00000460610 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
RAF1-206ENST00000460610 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
RAF1-206ENST00000460610 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
RAF1-206ENST00000460610 SPATA31D1Q6ZQQ2 1576 aa12.53□□□□□ -0.4
RAF1-206ENST00000460610 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
RAF1-206ENST00000460610 FER1L4A9Z1Z3 1794 aa12.51□□□□□ -0.41
RAF1-206ENST00000460610 YEATS2Q9ULM3 1422 aa12.5□□□□□ -0.41
RAF1-206ENST00000460610 TTC37Q6PGP7 1564 aa12.48□□□□□ -0.41
RAF1-206ENST00000460610 DENND4BO75064 1496 aaPredicted RBP12.47□□□□□ -0.41
RAF1-206ENST00000460610 FHOD3Q2V2M9 1422 aa12.47□□□□□ -0.41
RAF1-206ENST00000460610 MLECQ14165 292 aa12.47□□□□□ -0.41
RAF1-206ENST00000460610 PREX1Q8TCU6 1659 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms