RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
CDK11A-209ENST00000460465 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
CDK11A-209ENST00000460465 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
CDK11A-209ENST00000460465 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
CDK11A-209ENST00000460465 EFCAB5A4FU69 1503 aa27.03■■□□□ 1.92
CDK11A-209ENST00000460465 GRIN2AQ12879 1464 aa26.95■■□□□ 1.91
CDK11A-209ENST00000460465 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.9
CDK11A-209ENST00000460465 SAMD9Q5K651 1589 aa26.94■■□□□ 1.9
CDK11A-209ENST00000460465 IQGAP2Q13576 1575 aa26.93■■□□□ 1.9
CDK11A-209ENST00000460465 APLP2Q06481 763 aa26.93■■□□□ 1.9
CDK11A-209ENST00000460465 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
CDK11A-209ENST00000460465 P3H3Q8IVL6 736 aa26.91■■□□□ 1.9
CDK11A-209ENST00000460465 FHOD3Q2V2M9 1422 aa26.91■■□□□ 1.9
CDK11A-209ENST00000460465 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
CDK11A-209ENST00000460465 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
CDK11A-209ENST00000460465 CEP170Q5SW79 1584 aa26.82■■□□□ 1.88
CDK11A-209ENST00000460465 KIAA0586Q9BVV6 1533 aa26.82■■□□□ 1.88
CDK11A-209ENST00000460465 FBLN2P98095 1184 aa26.78■■□□□ 1.88
CDK11A-209ENST00000460465 UGGT2Q9NYU1 1516 aa26.78■■□□□ 1.88
CDK11A-209ENST00000460465 FMN1Q68DA7 1419 aa26.76■■□□□ 1.87
CDK11A-209ENST00000460465 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
CDK11A-209ENST00000460465 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
CDK11A-209ENST00000460465 NUP160Q12769 1436 aa26.73■■□□□ 1.87
CDK11A-209ENST00000460465 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
CDK11A-209ENST00000460465 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
CDK11A-209ENST00000460465 CFAP43Q8NDM7 1665 aa26.72■■□□□ 1.87
CDK11A-209ENST00000460465 CHD1O14646 1710 aa26.72■■□□□ 1.87
CDK11A-209ENST00000460465 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
CDK11A-209ENST00000460465 KIAA0556O60303 1618 aa26.67■■□□□ 1.86
CDK11A-209ENST00000460465 DISP1Q96F81 1524 aa26.65■■□□□ 1.86
CDK11A-209ENST00000460465 ATP1B4Q9UN42 357 aaPredicted RBP26.63■■□□□ 1.85
CDK11A-209ENST00000460465 LRRIQ1Q96JM4 1722 aa26.62■■□□□ 1.85
CDK11A-209ENST00000460465 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
CDK11A-209ENST00000460465 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
CDK11A-209ENST00000460465 JPH4Q96JJ6 628 aa26.51■■□□□ 1.84
CDK11A-209ENST00000460465 CARMIL2Q6F5E8 1435 aa26.47■■□□□ 1.83
CDK11A-209ENST00000460465 HRCP23327 699 aa26.47■■□□□ 1.83
CDK11A-209ENST00000460465 CCDC18Q5T9S5 1454 aa26.45■■□□□ 1.82
CDK11A-209ENST00000460465 RAPGEF6Q8TEU7 1601 aa26.43■■□□□ 1.82
CDK11A-209ENST00000460465 RRBP1Q9P2E9 1410 aaKnown RBP26.42■■□□□ 1.82
CDK11A-209ENST00000460465 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
CDK11A-209ENST00000460465 EPRSP07814 1512 aaKnown RBP26.4■■□□□ 1.82
CDK11A-209ENST00000460465 MTUS2Q5JR59 1369 aa26.37■■□□□ 1.81
CDK11A-209ENST00000460465 PRG4Q92954 1404 aaPredicted RBP26.36■■□□□ 1.81
CDK11A-209ENST00000460465 CDK13Q14004 1512 aaKnown RBP26.36■■□□□ 1.81
CDK11A-209ENST00000460465 EHBP1L1Q8N3D4 1523 aa26.35■■□□□ 1.81
CDK11A-209ENST00000460465 PHLDB1Q86UU1 1377 aa26.35■■□□□ 1.81
CDK11A-209ENST00000460465 MAGI3Q5TCQ9 1506 aa26.34■■□□□ 1.81
CDK11A-209ENST00000460465 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
CDK11A-209ENST00000460465 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
CDK11A-209ENST00000460465 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.81
CDK11A-209ENST00000460465 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.8
CDK11A-209ENST00000460465 SUPT6HQ7KZ85 1726 aaKnown RBP26.31■■□□□ 1.8
CDK11A-209ENST00000460465 PLB1Q6P1J6 1458 aa26.31■■□□□ 1.8
CDK11A-209ENST00000460465 ARID3CA6NKF2 412 aa26.27■■□□□ 1.8
CDK11A-209ENST00000460465 ABCA8O94911 1581 aa26.26■■□□□ 1.79
CDK11A-209ENST00000460465 NCOA2Q15596 1464 aa26.25■■□□□ 1.79
CDK11A-209ENST00000460465 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
CDK11A-209ENST00000460465 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
CDK11A-209ENST00000460465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.79
CDK11A-209ENST00000460465 PTPRGP23470 1445 aa26.2■■□□□ 1.78
CDK11A-209ENST00000460465 FGD6Q6ZV73 1430 aa26.15■■□□□ 1.78
CDK11A-209ENST00000460465 MYOM3Q5VTT5 1437 aa26.14■■□□□ 1.78
CDK11A-209ENST00000460465 FAM50AQ14320 339 aaKnown RBP26.11■■□□□ 1.77
CDK11A-209ENST00000460465 CCER1Q8TC90 406 aaPredicted RBP26.11■■□□□ 1.77
CDK11A-209ENST00000460465 CDK11AQ9UQ88 783 aaPredicted RBP26.1■■□□□ 1.77
CDK11A-209ENST00000460465 ITGAEP38570 1179 aa26.09■■□□□ 1.77
CDK11A-209ENST00000460465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.09■■□□□ 1.77
CDK11A-209ENST00000460465 ZEB1P37275 1124 aaPredicted RBP26.09■■□□□ 1.77
CDK11A-209ENST00000460465 ATP10BO94823 1461 aa26.07■■□□□ 1.76
CDK11A-209ENST00000460465 TROQ12816 1431 aaPredicted RBP26.06■■□□□ 1.76
CDK11A-209ENST00000460465 UACAQ9BZF9 1416 aa26.06■■□□□ 1.76
CDK11A-209ENST00000460465 PTPN23Q9H3S7 1636 aa26.06■■□□□ 1.76
CDK11A-209ENST00000460465 ADCY10Q96PN6 1610 aa26.05■■□□□ 1.76
CDK11A-209ENST00000460465 KIF14Q15058 1648 aa26.01■■□□□ 1.75
CDK11A-209ENST00000460465 ABCC2Q92887 1545 aa26.01■■□□□ 1.75
CDK11A-209ENST00000460465 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
CDK11A-209ENST00000460465 TCOF1Q13428 1488 aaKnown RBP25.97■■□□□ 1.75
CDK11A-209ENST00000460465 MIA2Q96PC5 1412 aa25.97■■□□□ 1.75
CDK11A-209ENST00000460465 ITSN2Q9NZM3 1697 aa25.94■■□□□ 1.74
CDK11A-209ENST00000460465 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
CDK11A-209ENST00000460465 UHRF1BP1LA0JNW5 1464 aa25.9■■□□□ 1.74
CDK11A-209ENST00000460465 ZCCHC11Q5TAX3 1644 aaKnown RBP25.87■■□□□ 1.73
CDK11A-209ENST00000460465 PTPRKQ15262 1439 aa25.87■■□□□ 1.73
CDK11A-209ENST00000460465 SETD5Q9C0A6 1442 aa25.87■■□□□ 1.73
CDK11A-209ENST00000460465 CDC42BPAQ5VT25 1732 aa25.86■■□□□ 1.73
CDK11A-209ENST00000460465 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
CDK11A-209ENST00000460465 GPATCH8Q9UKJ3 1502 aaKnown RBP25.85■■□□□ 1.73
CDK11A-209ENST00000460465 ABCC10Q5T3U5 1492 aa25.85■■□□□ 1.73
CDK11A-209ENST00000460465 KDM5BQ9UGL1 1544 aa25.81■■□□□ 1.72
CDK11A-209ENST00000460465 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
CDK11A-209ENST00000460465 DNMT1P26358 1616 aaKnown RBP25.78■■□□□ 1.72
CDK11A-209ENST00000460465 CAMSAP2Q08AD1 1489 aa25.77■■□□□ 1.72
CDK11A-209ENST00000460465 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
CDK11A-209ENST00000460465 ZNF644Q9H582 1327 aaPredicted RBP25.76■■□□□ 1.71
CDK11A-209ENST00000460465 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
CDK11A-209ENST00000460465 DAPK1P53355 1430 aa25.73■■□□□ 1.71
CDK11A-209ENST00000460465 GCC2Q8IWJ2 1684 aa25.72■■□□□ 1.71
CDK11A-209ENST00000460465 PREX2Q70Z35 1606 aa25.72■■□□□ 1.71
CDK11A-209ENST00000460465 TTC37Q6PGP7 1564 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms