RNA–Protein interactions for RNA: ENST00000460405.5

LDHA-207, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-207ENST00000460405 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
LDHA-207ENST00000460405 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
LDHA-207ENST00000460405 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
LDHA-207ENST00000460405 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
LDHA-207ENST00000460405 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
LDHA-207ENST00000460405 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
LDHA-207ENST00000460405 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
LDHA-207ENST00000460405 CUL7Q14999 1698 aa17.38■□□□□ 0.37
LDHA-207ENST00000460405 RUSC2Q8N2Y8 1516 aa17.37■□□□□ 0.37
LDHA-207ENST00000460405 PTPRGP23470 1445 aa17.29■□□□□ 0.36
LDHA-207ENST00000460405 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
LDHA-207ENST00000460405 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
LDHA-207ENST00000460405 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
LDHA-207ENST00000460405 RAPGEF2Q9Y4G8 1499 aa17.25■□□□□ 0.35
LDHA-207ENST00000460405 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
LDHA-207ENST00000460405 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
LDHA-207ENST00000460405 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
LDHA-207ENST00000460405 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
LDHA-207ENST00000460405 ADCY10Q96PN6 1610 aa17.18■□□□□ 0.34
LDHA-207ENST00000460405 DISP1Q96F81 1524 aa17.13■□□□□ 0.33
LDHA-207ENST00000460405 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
LDHA-207ENST00000460405 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
LDHA-207ENST00000460405 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
LDHA-207ENST00000460405 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
LDHA-207ENST00000460405 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
LDHA-207ENST00000460405 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
LDHA-207ENST00000460405 PRXQ9BXM0 1461 aa17.09■□□□□ 0.33
LDHA-207ENST00000460405 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
LDHA-207ENST00000460405 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
LDHA-207ENST00000460405 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
LDHA-207ENST00000460405 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
LDHA-207ENST00000460405 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
LDHA-207ENST00000460405 KIAA0556O60303 1618 aa17.02■□□□□ 0.31
LDHA-207ENST00000460405 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
LDHA-207ENST00000460405 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
LDHA-207ENST00000460405 EEA1Q15075 1411 aa16.96■□□□□ 0.31
LDHA-207ENST00000460405 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
LDHA-207ENST00000460405 GLI2P10070 1586 aa16.94■□□□□ 0.3
LDHA-207ENST00000460405 EPRSP07814 1512 aaKnown RBP16.93■□□□□ 0.3
LDHA-207ENST00000460405 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
LDHA-207ENST00000460405 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
LDHA-207ENST00000460405 KDM6BO15054 1643 aa16.92■□□□□ 0.3
LDHA-207ENST00000460405 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
LDHA-207ENST00000460405 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
LDHA-207ENST00000460405 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
LDHA-207ENST00000460405 ABCA8O94911 1581 aa16.87■□□□□ 0.29
LDHA-207ENST00000460405 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
LDHA-207ENST00000460405 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
LDHA-207ENST00000460405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
LDHA-207ENST00000460405 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
LDHA-207ENST00000460405 CD109Q6YHK3 1445 aa16.83■□□□□ 0.28
LDHA-207ENST00000460405 KDM4FA0A1W2PPD8 638 aa16.81■□□□□ 0.28
LDHA-207ENST00000460405 ATP10BO94823 1461 aa16.8■□□□□ 0.28
LDHA-207ENST00000460405 MAP3K4Q9Y6R4 1608 aa16.8■□□□□ 0.28
LDHA-207ENST00000460405 COL17A1Q9UMD9 1497 aaPredicted RBP16.8■□□□□ 0.28
LDHA-207ENST00000460405 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
LDHA-207ENST00000460405 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
LDHA-207ENST00000460405 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
LDHA-207ENST00000460405 SAMD9Q5K651 1589 aa16.77■□□□□ 0.27
LDHA-207ENST00000460405 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
LDHA-207ENST00000460405 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
LDHA-207ENST00000460405 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
LDHA-207ENST00000460405 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
LDHA-207ENST00000460405 KIF21BO75037 1637 aa16.72■□□□□ 0.27
LDHA-207ENST00000460405 FOXD1Q16676 465 aa16.72■□□□□ 0.27
LDHA-207ENST00000460405 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
LDHA-207ENST00000460405 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
LDHA-207ENST00000460405 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
LDHA-207ENST00000460405 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
LDHA-207ENST00000460405 EFCAB5A4FU69 1503 aa16.67■□□□□ 0.26
LDHA-207ENST00000460405 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
LDHA-207ENST00000460405 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
LDHA-207ENST00000460405 ARAP3Q8WWN8 1544 aa16.63■□□□□ 0.25
LDHA-207ENST00000460405 ABCA9Q8IUA7 1624 aa16.61■□□□□ 0.25
LDHA-207ENST00000460405 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
LDHA-207ENST00000460405 FMN1Q68DA7 1419 aa16.61■□□□□ 0.25
LDHA-207ENST00000460405 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
LDHA-207ENST00000460405 NEO1Q92859 1461 aa16.6■□□□□ 0.25
LDHA-207ENST00000460405 ARHGAP35Q9NRY4 1499 aa16.56■□□□□ 0.24
LDHA-207ENST00000460405 AKNAQ7Z591 1439 aa16.52■□□□□ 0.23
LDHA-207ENST00000460405 CDK13Q14004 1512 aaKnown RBP16.51■□□□□ 0.23
LDHA-207ENST00000460405 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
LDHA-207ENST00000460405 FANCAO15360 1455 aa16.5■□□□□ 0.23
LDHA-207ENST00000460405 DENND4BO75064 1496 aaPredicted RBP16.5■□□□□ 0.23
LDHA-207ENST00000460405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.239e-20■□□□□ 9.6
LDHA-207ENST00000460405 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
LDHA-207ENST00000460405 PLCH2O75038 1416 aa16.47■□□□□ 0.23
LDHA-207ENST00000460405 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
LDHA-207ENST00000460405 CLIP1P30622 1438 aa16.44■□□□□ 0.22
LDHA-207ENST00000460405 TROQ12816 1431 aaPredicted RBP16.43■□□□□ 0.22
LDHA-207ENST00000460405 SCAPERQ9BY12 1400 aa16.43■□□□□ 0.22
LDHA-207ENST00000460405 TTC37Q6PGP7 1564 aa16.43■□□□□ 0.22
LDHA-207ENST00000460405 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
LDHA-207ENST00000460405 CFAP74Q9C0B2 1584 aa16.41■□□□□ 0.22
LDHA-207ENST00000460405 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
LDHA-207ENST00000460405 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
LDHA-207ENST00000460405 CCDC18Q5T9S5 1454 aa16.36■□□□□ 0.21
LDHA-207ENST00000460405 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
LDHA-207ENST00000460405 PTPRMP28827 1452 aa16.35■□□□□ 0.21
LDHA-207ENST00000460405 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms