RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 IGF1RP08069 1367 aa25.36■■□□□ 1.65
ATG4B-213ENST00000460211 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
ATG4B-213ENST00000460211 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
ATG4B-213ENST00000460211 CARMIL1Q5VZK9 1371 aa25.24■■□□□ 1.63
ATG4B-213ENST00000460211 FAM69CQ0P6D2 419 aa25.23■■□□□ 1.63
ATG4B-213ENST00000460211 CUL7Q14999 1698 aa25.23■■□□□ 1.63
ATG4B-213ENST00000460211 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
ATG4B-213ENST00000460211 ABCC10Q5T3U5 1492 aa25.19■■□□□ 1.62
ATG4B-213ENST00000460211 ADCY10Q96PN6 1610 aa25.19■■□□□ 1.62
ATG4B-213ENST00000460211 MAPKBP1O60336 1514 aa25.15■■□□□ 1.62
ATG4B-213ENST00000460211 DIP2BQ9P265 1576 aa25.14■■□□□ 1.62
ATG4B-213ENST00000460211 KIAA0586Q9BVV6 1533 aa25.11■■□□□ 1.61
ATG4B-213ENST00000460211 TSPOAP1O95153 1857 aa25.07■■□□□ 1.6
ATG4B-213ENST00000460211 TTBK1Q5TCY1 1321 aaPredicted RBP25.06■■□□□ 1.6
ATG4B-213ENST00000460211 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
ATG4B-213ENST00000460211 KDM6BO15054 1643 aa25.03■■□□□ 1.6
ATG4B-213ENST00000460211 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
ATG4B-213ENST00000460211 CSRNP3Q8WYN3 585 aa24.97■■□□□ 1.59
ATG4B-213ENST00000460211 PTPRGP23470 1445 aa24.96■■□□□ 1.59
ATG4B-213ENST00000460211 EEA1Q15075 1411 aa24.95■■□□□ 1.58
ATG4B-213ENST00000460211 KDM4FA0A1W2PPD8 638 aa24.91■■□□□ 1.58
ATG4B-213ENST00000460211 PRXQ9BXM0 1461 aa24.9■■□□□ 1.58
ATG4B-213ENST00000460211 CARMIL2Q6F5E8 1435 aa24.88■■□□□ 1.57
ATG4B-213ENST00000460211 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
ATG4B-213ENST00000460211 IQGAP2Q13576 1575 aa24.88■■□□□ 1.57
ATG4B-213ENST00000460211 ABCC2Q92887 1545 aa24.86■■□□□ 1.57
ATG4B-213ENST00000460211 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
ATG4B-213ENST00000460211 ASXL2Q76L83 1435 aa24.83■■□□□ 1.57
ATG4B-213ENST00000460211 PPRC1Q5VV67 1664 aaKnown RBP24.8■■□□□ 1.56
ATG4B-213ENST00000460211 PLB1Q6P1J6 1458 aa24.78■■□□□ 1.56
ATG4B-213ENST00000460211 UACAQ9BZF9 1416 aa24.76■■□□□ 1.55
ATG4B-213ENST00000460211 DISP1Q96F81 1524 aa24.76■■□□□ 1.55
ATG4B-213ENST00000460211 GLI2P10070 1586 aa24.76■■□□□ 1.55
ATG4B-213ENST00000460211 UHRF1BP1LA0JNW5 1464 aa24.75■■□□□ 1.55
ATG4B-213ENST00000460211 UGGT2Q9NYU1 1516 aa24.75■■□□□ 1.55
ATG4B-213ENST00000460211 CTTNBP2Q8WZ74 1663 aa24.69■■□□□ 1.54
ATG4B-213ENST00000460211 GOLGA3Q08378 1498 aa24.68■■□□□ 1.54
ATG4B-213ENST00000460211 EPRSP07814 1512 aaKnown RBP24.67■■□□□ 1.54
ATG4B-213ENST00000460211 ZCCHC11Q5TAX3 1644 aaKnown RBP24.67■■□□□ 1.54
ATG4B-213ENST00000460211 KDM5BQ9UGL1 1544 aa24.66■■□□□ 1.54
ATG4B-213ENST00000460211 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
ATG4B-213ENST00000460211 MAP3K4Q9Y6R4 1608 aa24.65■■□□□ 1.54
ATG4B-213ENST00000460211 KIAA0556O60303 1618 aa24.64■■□□□ 1.54
ATG4B-213ENST00000460211 COL17A1Q9UMD9 1497 aaPredicted RBP24.64■■□□□ 1.54
ATG4B-213ENST00000460211 KIF21BO75037 1637 aa24.58■■□□□ 1.53
ATG4B-213ENST00000460211 TEX14Q8IWB6 1497 aa24.58■■□□□ 1.52
ATG4B-213ENST00000460211 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
ATG4B-213ENST00000460211 WDR7Q9Y4E6 1490 aa24.52■■□□□ 1.52
ATG4B-213ENST00000460211 P3H3Q8IVL6 736 aa24.52■■□□□ 1.52
ATG4B-213ENST00000460211 EHMT2Q96KQ7 1210 aa24.52■■□□□ 1.52
ATG4B-213ENST00000460211 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
ATG4B-213ENST00000460211 ILDR1Q86SU0 546 aaPredicted RBP24.51■■□□□ 1.51
ATG4B-213ENST00000460211 KCNH8Q96L42 1107 aa24.46■■□□□ 1.51
ATG4B-213ENST00000460211 CD109Q6YHK3 1445 aa24.43■■□□□ 1.5
ATG4B-213ENST00000460211 ABCA8O94911 1581 aa24.42■■□□□ 1.5
ATG4B-213ENST00000460211 HECW2Q9P2P5 1572 aa24.42■■□□□ 1.5
ATG4B-213ENST00000460211 CFAP43Q8NDM7 1665 aa24.41■■□□□ 1.5
ATG4B-213ENST00000460211 SAMD9Q5K651 1589 aa24.39■■□□□ 1.5
ATG4B-213ENST00000460211 MAGI3Q5TCQ9 1506 aa24.37■■□□□ 1.49
ATG4B-213ENST00000460211 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
ATG4B-213ENST00000460211 EFCAB5A4FU69 1503 aa24.34■■□□□ 1.49
ATG4B-213ENST00000460211 FHOD3Q2V2M9 1422 aa24.32■■□□□ 1.48
ATG4B-213ENST00000460211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.24■■□□□ 1.47
ATG4B-213ENST00000460211 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
ATG4B-213ENST00000460211 ATP10BO94823 1461 aa24.22■■□□□ 1.47
ATG4B-213ENST00000460211 RAPGEF6Q8TEU7 1601 aa24.21■■□□□ 1.47
ATG4B-213ENST00000460211 ARAP3Q8WWN8 1544 aa24.2■■□□□ 1.46
ATG4B-213ENST00000460211 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
ATG4B-213ENST00000460211 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
ATG4B-213ENST00000460211 ABCA9Q8IUA7 1624 aa24.16■■□□□ 1.46
ATG4B-213ENST00000460211 NUP153P49790 1475 aaKnown RBP24.14■■□□□ 1.46
ATG4B-213ENST00000460211 ATP1B4Q9UN42 357 aaPredicted RBP24.14■■□□□ 1.45
ATG4B-213ENST00000460211 PLEKHD1A6NEE1 506 aa24.12■■□□□ 1.45
ATG4B-213ENST00000460211 RAPGEF3O95398 923 aa24.12■■□□□ 1.45
ATG4B-213ENST00000460211 ADAMTSL3P82987 1691 aa24.07■■□□□ 1.44
ATG4B-213ENST00000460211 CLIP1P30622 1438 aa24.07■■□□□ 1.44
ATG4B-213ENST00000460211 PHLDB1Q86UU1 1377 aa24.06■■□□□ 1.44
ATG4B-213ENST00000460211 PTPRMP28827 1452 aa24.06■■□□□ 1.44
ATG4B-213ENST00000460211 NEO1Q92859 1461 aa24.04■■□□□ 1.44
ATG4B-213ENST00000460211 FRMPD1Q5SYB0 1578 aa24.03■■□□□ 1.44
ATG4B-213ENST00000460211 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
ATG4B-213ENST00000460211 ARID4BQ4LE39 1312 aaPredicted RBP24.03■■□□□ 1.44
ATG4B-213ENST00000460211 BCORL1Q5H9F3 1711 aa24■■□□□ 1.43
ATG4B-213ENST00000460211 HECW1Q76N89 1606 aa23.99■■□□□ 1.43
ATG4B-213ENST00000460211 MADDQ8WXG6 1647 aa23.99■■□□□ 1.43
ATG4B-213ENST00000460211 LOC105371045A0A1W2PR82 267 aa23.96■■□□□ 1.43
ATG4B-213ENST00000460211 CDK13Q14004 1512 aaKnown RBP23.94■■□□□ 1.42
ATG4B-213ENST00000460211 CASKIN1Q8WXD9 1431 aa23.94■■□□□ 1.42
ATG4B-213ENST00000460211 FBXO41Q8TF61 875 aa23.93■■□□□ 1.42
ATG4B-213ENST00000460211 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
ATG4B-213ENST00000460211 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
ATG4B-213ENST00000460211 RICTORQ6R327 1708 aa23.91■■□□□ 1.42
ATG4B-213ENST00000460211 RIMS1Q86UR5 1692 aaKnown RBP23.91■■□□□ 1.42
ATG4B-213ENST00000460211 DENND4BO75064 1496 aaPredicted RBP23.9■■□□□ 1.42
ATG4B-213ENST00000460211 PCF11O94913 1555 aaKnown RBP23.9■■□□□ 1.42
ATG4B-213ENST00000460211 AKNAQ7Z591 1439 aa23.88■■□□□ 1.41
ATG4B-213ENST00000460211 PLPPR3Q6T4P5 718 aa23.88■■□□□ 1.41
ATG4B-213ENST00000460211 FANCAO15360 1455 aa23.87■■□□□ 1.41
ATG4B-213ENST00000460211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.87■■□□□ 1.41
ATG4B-213ENST00000460211 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms