RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 MAGI1Q96QZ7 1491 aaPredicted RBP35.18■■■■□ 3.22
LCNL1-203ENST00000460177 EFCAB5A4FU69 1503 aa35.07■■■■□ 3.2
LCNL1-203ENST00000460177 GRIN2AQ12879 1464 aa35.05■■■■□ 3.2
LCNL1-203ENST00000460177 SYNJ2O15056 1496 aa35.04■■■■□ 3.2
LCNL1-203ENST00000460177 IQGAP2Q13576 1575 aa34.99■■■■□ 3.19
LCNL1-203ENST00000460177 SAMD9Q5K651 1589 aa34.99■■■■□ 3.19
LCNL1-203ENST00000460177 TRIM26Q12899 539 aaPredicted RBP34.9■■■■□ 3.18
LCNL1-203ENST00000460177 PPARGC1BQ86YN6 1023 aaKnown RBP34.9■■■■□ 3.18
LCNL1-203ENST00000460177 CEP170Q5SW79 1584 aa34.88■■■■□ 3.17
LCNL1-203ENST00000460177 FHOD3Q2V2M9 1422 aa34.87■■■■□ 3.17
LCNL1-203ENST00000460177 PCGF6Q9BYE7 350 aa34.86■■■■□ 3.17
LCNL1-203ENST00000460177 KIAA0586Q9BVV6 1533 aa34.85■■■■□ 3.17
LCNL1-203ENST00000460177 CHMP7Q8WUX9 453 aaPredicted RBP34.84■■■■□ 3.17
LCNL1-203ENST00000460177 UGGT2Q9NYU1 1516 aa34.81■■■■□ 3.16
LCNL1-203ENST00000460177 NUP160Q12769 1436 aa34.8■■■■□ 3.16
LCNL1-203ENST00000460177 PCF11O94913 1555 aaKnown RBP34.78■■■■□ 3.16
LCNL1-203ENST00000460177 P3H3Q8IVL6 736 aa34.78■■■■□ 3.16
LCNL1-203ENST00000460177 CHD1O14646 1710 aa34.77■■■■□ 3.16
LCNL1-203ENST00000460177 FBLN2P98095 1184 aa34.72■■■■□ 3.15
LCNL1-203ENST00000460177 APLP2Q06481 763 aa34.71■■■■□ 3.15
LCNL1-203ENST00000460177 FMN1Q68DA7 1419 aa34.68■■■■□ 3.14
LCNL1-203ENST00000460177 FYCO1Q9BQS8 1478 aa34.67■■■■□ 3.14
LCNL1-203ENST00000460177 KIAA0556O60303 1618 aa34.66■■■■□ 3.14
LCNL1-203ENST00000460177 TTBK1Q5TCY1 1321 aaPredicted RBP34.65■■■■□ 3.14
LCNL1-203ENST00000460177 CFAP43Q8NDM7 1665 aa34.64■■■■□ 3.14
LCNL1-203ENST00000460177 CASKIN1Q8WXD9 1431 aa34.63■■■■□ 3.13
LCNL1-203ENST00000460177 MAP3K1Q13233 1512 aa34.63■■■■□ 3.13
LCNL1-203ENST00000460177 TIAM1Q13009 1591 aa34.63■■■■□ 3.13
LCNL1-203ENST00000460177 DISP1Q96F81 1524 aa34.62■■■■□ 3.13
LCNL1-203ENST00000460177 LRRIQ1Q96JM4 1722 aa34.5■■■■□ 3.11
LCNL1-203ENST00000460177 KANK4Q5T7N3 995 aaPredicted RBP34.48■■■■□ 3.11
LCNL1-203ENST00000460177 HECW1Q76N89 1606 aa34.42■■■■□ 3.1
LCNL1-203ENST00000460177 LRRC9Q6ZRR7 1453 aa34.41■■■■□ 3.1
LCNL1-203ENST00000460177 JPH4Q96JJ6 628 aa34.41■■■■□ 3.1
LCNL1-203ENST00000460177 SHROOM2Q13796 1616 aa34.39■■■■□ 3.1
LCNL1-203ENST00000460177 CARMIL2Q6F5E8 1435 aa34.38■■■■□ 3.09
LCNL1-203ENST00000460177 ATP1B4Q9UN42 357 aaPredicted RBP34.36■■■■□ 3.09
LCNL1-203ENST00000460177 CLASP1Q7Z460 1538 aa34.34■■■■□ 3.09
LCNL1-203ENST00000460177 RAPGEF6Q8TEU7 1601 aa34.3■■■■□ 3.08
LCNL1-203ENST00000460177 CCDC18Q5T9S5 1454 aa34.3■■■■□ 3.08
LCNL1-203ENST00000460177 PRG4Q92954 1404 aaPredicted RBP34.26■■■■□ 3.08
LCNL1-203ENST00000460177 EPRSP07814 1512 aaKnown RBP34.24■■■■□ 3.07
LCNL1-203ENST00000460177 NUP153P49790 1475 aaKnown RBP34.18■■■■□ 3.06
LCNL1-203ENST00000460177 CDK13Q14004 1512 aaKnown RBP34.18■■■■□ 3.06
LCNL1-203ENST00000460177 OSCARQ8IYS5 282 aa34.18■■■■□ 3.06
LCNL1-203ENST00000460177 EHBP1L1Q8N3D4 1523 aa34.17■■■■□ 3.06
LCNL1-203ENST00000460177 RRBP1Q9P2E9 1410 aaKnown RBP34.16■■■■□ 3.06
LCNL1-203ENST00000460177 PLB1Q6P1J6 1458 aa34.14■■■■□ 3.06
LCNL1-203ENST00000460177 MAGI3Q5TCQ9 1506 aa34.14■■■■□ 3.06
LCNL1-203ENST00000460177 ABCA8O94911 1581 aa34.14■■■■□ 3.06
LCNL1-203ENST00000460177 MTUS2Q5JR59 1369 aa34.12■■■■□ 3.05
LCNL1-203ENST00000460177 ERCC6L2Q5T890 1561 aa34.12■■■■□ 3.05
LCNL1-203ENST00000460177 SUPT6HQ7KZ85 1726 aaKnown RBP34.08■■■■□ 3.05
LCNL1-203ENST00000460177 PHLDB1Q86UU1 1377 aa34.08■■■■□ 3.05
LCNL1-203ENST00000460177 PTPRGP23470 1445 aa34.02■■■■□ 3.04
LCNL1-203ENST00000460177 CCNB3Q8WWL7 1395 aa34.02■■■■□ 3.04
LCNL1-203ENST00000460177 NCOA2Q15596 1464 aa33.99■■■■□ 3.03
LCNL1-203ENST00000460177 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
LCNL1-203ENST00000460177 ARID3CA6NKF2 412 aa33.96■■■■□ 3.03
LCNL1-203ENST00000460177 HNRNPUL2Q1KMD3 747 aaKnown RBP33.87■■■■□ 3.01
LCNL1-203ENST00000460177 HRCP23327 699 aa33.87■■■■□ 3.01
LCNL1-203ENST00000460177 UACAQ9BZF9 1416 aa33.87■■■■□ 3.01
LCNL1-203ENST00000460177 FGD6Q6ZV73 1430 aa33.85■■■■□ 3.01
LCNL1-203ENST00000460177 MYOM3Q5VTT5 1437 aa33.85■■■■□ 3.01
LCNL1-203ENST00000460177 ATP10BO94823 1461 aa33.84■■■■□ 3.01
LCNL1-203ENST00000460177 ADCY10Q96PN6 1610 aa33.83■■■■□ 3.01
LCNL1-203ENST00000460177 ABCC2Q92887 1545 aa33.83■■■■□ 3.01
LCNL1-203ENST00000460177 TROQ12816 1431 aaPredicted RBP33.81■■■■□ 3
LCNL1-203ENST00000460177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.79■■■■□ 3
LCNL1-203ENST00000460177 CDK11AQ9UQ88 783 aaPredicted RBP33.79■■■■□ 3
LCNL1-203ENST00000460177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.78■■■■□ 3
LCNL1-203ENST00000460177 KIF14Q15058 1648 aa33.73■■■□□ 2.99
LCNL1-203ENST00000460177 PTPN23Q9H3S7 1636 aa33.73■■■□□ 2.99
LCNL1-203ENST00000460177 UHRF1BP1LA0JNW5 1464 aa33.72■■■□□ 2.99
LCNL1-203ENST00000460177 FAM50AQ14320 339 aaKnown RBP33.69■■■□□ 2.98
LCNL1-203ENST00000460177 TCOF1Q13428 1488 aaKnown RBP33.67■■■□□ 2.98
LCNL1-203ENST00000460177 MIA2Q96PC5 1412 aa33.64■■■□□ 2.98
LCNL1-203ENST00000460177 ITSN2Q9NZM3 1697 aa33.64■■■□□ 2.98
LCNL1-203ENST00000460177 ZCCHC11Q5TAX3 1644 aaKnown RBP33.64■■■□□ 2.98
LCNL1-203ENST00000460177 RIMBP3CA6NJZ7 1639 aa33.61■■■□□ 2.97
LCNL1-203ENST00000460177 RIMBP3BA6NNM3 1639 aa33.61■■■□□ 2.97
LCNL1-203ENST00000460177 RIMBP3Q9UFD9 1639 aa33.61■■■□□ 2.97
LCNL1-203ENST00000460177 PLEKHD1A6NEE1 506 aa33.6■■■□□ 2.97
LCNL1-203ENST00000460177 ITGAEP38570 1179 aa33.6■■■□□ 2.97
LCNL1-203ENST00000460177 KDM5BQ9UGL1 1544 aa33.59■■■□□ 2.97
LCNL1-203ENST00000460177 ABCC10Q5T3U5 1492 aa33.56■■■□□ 2.96
LCNL1-203ENST00000460177 CDC42BPAQ5VT25 1732 aa33.54■■■□□ 2.96
LCNL1-203ENST00000460177 GPATCH8Q9UKJ3 1502 aaKnown RBP33.52■■■□□ 2.96
LCNL1-203ENST00000460177 CCER1Q8TC90 406 aaPredicted RBP33.5■■■□□ 2.95
LCNL1-203ENST00000460177 PTPRKQ15262 1439 aa33.46■■■□□ 2.95
LCNL1-203ENST00000460177 ZEB1P37275 1124 aaPredicted RBP33.45■■■□□ 2.94
LCNL1-203ENST00000460177 TTC37Q6PGP7 1564 aa33.41■■■□□ 2.94
LCNL1-203ENST00000460177 DNMT1P26358 1616 aaKnown RBP33.4■■■□□ 2.94
LCNL1-203ENST00000460177 PREX2Q70Z35 1606 aa33.4■■■□□ 2.94
LCNL1-203ENST00000460177 CAMSAP2Q08AD1 1489 aa33.4■■■□□ 2.94
LCNL1-203ENST00000460177 SETD5Q9C0A6 1442 aa33.4■■■□□ 2.94
LCNL1-203ENST00000460177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.38■■■□□ 2.93
LCNL1-203ENST00000460177 RAB3GAP2Q9H2M9 1393 aa33.37■■■□□ 2.93
LCNL1-203ENST00000460177 CDC42BPBQ9Y5S2 1711 aa33.35■■■□□ 2.93
LCNL1-203ENST00000460177 CYB5RLQ6IPT4 315 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms