RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
THBS3-204ENST00000460050 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
THBS3-204ENST00000460050 PRG4Q92954 1404 aaPredicted RBP24.17■■□□□ 1.46
THBS3-204ENST00000460050 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
THBS3-204ENST00000460050 IQGAP2Q13576 1575 aa24.04■■□□□ 1.44
THBS3-204ENST00000460050 PRXQ9BXM0 1461 aa24■■□□□ 1.43
THBS3-204ENST00000460050 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
THBS3-204ENST00000460050 EEA1Q15075 1411 aa23.95■■□□□ 1.42
THBS3-204ENST00000460050 CTTNBP2Q8WZ74 1663 aa23.94■■□□□ 1.42
THBS3-204ENST00000460050 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
THBS3-204ENST00000460050 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
THBS3-204ENST00000460050 CARMIL2Q6F5E8 1435 aa23.93■■□□□ 1.42
THBS3-204ENST00000460050 UGGT2Q9NYU1 1516 aa23.9■■□□□ 1.42
THBS3-204ENST00000460050 DISP1Q96F81 1524 aa23.88■■□□□ 1.41
THBS3-204ENST00000460050 TNIKQ9UKE5 1360 aa23.86■■□□□ 1.41
THBS3-204ENST00000460050 PTPRGP23470 1445 aa23.85■■□□□ 1.41
THBS3-204ENST00000460050 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
THBS3-204ENST00000460050 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
THBS3-204ENST00000460050 KIAA0556O60303 1618 aa23.82■■□□□ 1.4
THBS3-204ENST00000460050 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
THBS3-204ENST00000460050 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
THBS3-204ENST00000460050 NPM1P06748 294 aaKnown RBP eCLIP23.74■■□□□ 1.39
THBS3-204ENST00000460050 KIF21BO75037 1637 aa23.73■■□□□ 1.39
THBS3-204ENST00000460050 MAPKBP1O60336 1514 aa23.7■■□□□ 1.38
THBS3-204ENST00000460050 UACAQ9BZF9 1416 aa23.68■■□□□ 1.38
THBS3-204ENST00000460050 UHRF1BP1LA0JNW5 1464 aa23.68■■□□□ 1.38
THBS3-204ENST00000460050 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
THBS3-204ENST00000460050 KIF13AQ9H1H9 1805 aa23.65■■□□□ 1.38
THBS3-204ENST00000460050 ABCC10Q5T3U5 1492 aa23.61■■□□□ 1.37
THBS3-204ENST00000460050 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
THBS3-204ENST00000460050 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
THBS3-204ENST00000460050 DIP2BQ9P265 1576 aa23.58■■□□□ 1.37
THBS3-204ENST00000460050 P3H3Q8IVL6 736 aa23.58■■□□□ 1.37
THBS3-204ENST00000460050 KDM5BQ9UGL1 1544 aa23.57■■□□□ 1.36
THBS3-204ENST00000460050 EHMT2Q96KQ7 1210 aa23.56■■□□□ 1.36
THBS3-204ENST00000460050 ABCA8O94911 1581 aa23.56■■□□□ 1.36
THBS3-204ENST00000460050 FAM69CQ0P6D2 419 aa23.55■■□□□ 1.36
THBS3-204ENST00000460050 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
THBS3-204ENST00000460050 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
THBS3-204ENST00000460050 ASXL2Q76L83 1435 aa23.53■■□□□ 1.36
THBS3-204ENST00000460050 UBTFP17480 764 aaKnown RBP23.51■■□□□ 1.35
THBS3-204ENST00000460050 EFCAB5A4FU69 1503 aa23.47■■□□□ 1.35
THBS3-204ENST00000460050 FHOD3Q2V2M9 1422 aa23.46■■□□□ 1.35
THBS3-204ENST00000460050 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
THBS3-204ENST00000460050 TSPOAP1O95153 1857 aa23.41■■□□□ 1.34
THBS3-204ENST00000460050 GLI2P10070 1586 aa23.4■■□□□ 1.34
THBS3-204ENST00000460050 WDR7Q9Y4E6 1490 aa23.4■■□□□ 1.34
THBS3-204ENST00000460050 EPRSP07814 1512 aaKnown RBP23.39■■□□□ 1.34
THBS3-204ENST00000460050 ARID3CA6NKF2 412 aa23.36■■□□□ 1.33
THBS3-204ENST00000460050 ATP10BO94823 1461 aa23.36■■□□□ 1.33
THBS3-204ENST00000460050 ARHGAP35Q9NRY4 1499 aa23.33■■□□□ 1.33
THBS3-204ENST00000460050 NUP153P49790 1475 aaKnown RBP23.32■■□□□ 1.32
THBS3-204ENST00000460050 MAP3K4Q9Y6R4 1608 aa23.31■■□□□ 1.32
THBS3-204ENST00000460050 PPRC1Q5VV67 1664 aaKnown RBP23.3■■□□□ 1.32
THBS3-204ENST00000460050 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
THBS3-204ENST00000460050 KDM6BO15054 1643 aa23.25■■□□□ 1.31
THBS3-204ENST00000460050 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
THBS3-204ENST00000460050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
THBS3-204ENST00000460050 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
THBS3-204ENST00000460050 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
THBS3-204ENST00000460050 TEX14Q8IWB6 1497 aa23.19■■□□□ 1.3
THBS3-204ENST00000460050 CD109Q6YHK3 1445 aa23.18■■□□□ 1.3
THBS3-204ENST00000460050 HECW1Q76N89 1606 aa23.18■■□□□ 1.3
THBS3-204ENST00000460050 CDK13Q14004 1512 aaKnown RBP23.16■■□□□ 1.3
THBS3-204ENST00000460050 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
THBS3-204ENST00000460050 CLIP1P30622 1438 aa23.15■■□□□ 1.3
THBS3-204ENST00000460050 ABCA9Q8IUA7 1624 aa23.15■■□□□ 1.3
THBS3-204ENST00000460050 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.29
THBS3-204ENST00000460050 PLEKHD1A6NEE1 506 aa23.12■■□□□ 1.29
THBS3-204ENST00000460050 COL17A1Q9UMD9 1497 aaPredicted RBP23.08■■□□□ 1.29
THBS3-204ENST00000460050 PCF11O94913 1555 aaKnown RBP23.08■■□□□ 1.29
THBS3-204ENST00000460050 LRRIQ1Q96JM4 1722 aa23.05■■□□□ 1.28
THBS3-204ENST00000460050 CASKIN1Q8WXD9 1431 aa23.05■■□□□ 1.28
THBS3-204ENST00000460050 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
THBS3-204ENST00000460050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.27
THBS3-204ENST00000460050 FYCO1Q9BQS8 1478 aa23■■□□□ 1.27
THBS3-204ENST00000460050 TTC37Q6PGP7 1564 aa22.99■■□□□ 1.27
THBS3-204ENST00000460050 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
THBS3-204ENST00000460050 LOC105371045A0A1W2PR82 267 aa22.98■■□□□ 1.27
THBS3-204ENST00000460050 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
THBS3-204ENST00000460050 NEO1Q92859 1461 aa22.96■■□□□ 1.27
THBS3-204ENST00000460050 TROQ12816 1431 aaPredicted RBP22.95■■□□□ 1.26
THBS3-204ENST00000460050 ARAP3Q8WWN8 1544 aa22.95■■□□□ 1.26
THBS3-204ENST00000460050 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
THBS3-204ENST00000460050 KIF14Q15058 1648 aa22.93■■□□□ 1.26
THBS3-204ENST00000460050 FANCAO15360 1455 aa22.9■■□□□ 1.26
THBS3-204ENST00000460050 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.26
THBS3-204ENST00000460050 MYO5CQ9NQX4 1742 aa22.87■■□□□ 1.25
THBS3-204ENST00000460050 PLCH2O75038 1416 aa22.86■■□□□ 1.25
THBS3-204ENST00000460050 AKNAQ7Z591 1439 aa22.84■■□□□ 1.25
THBS3-204ENST00000460050 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
THBS3-204ENST00000460050 RAPGEF3O95398 923 aa22.82■■□□□ 1.24
THBS3-204ENST00000460050 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
THBS3-204ENST00000460050 DENND4BO75064 1496 aaPredicted RBP22.79■■□□□ 1.24
THBS3-204ENST00000460050 RICTORQ6R327 1708 aa22.79■■□□□ 1.24
THBS3-204ENST00000460050 ADGRL1O94910 1474 aa22.77■■□□□ 1.24
THBS3-204ENST00000460050 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
THBS3-204ENST00000460050 EFCAB2Q5VUJ9 269 aa22.76■■□□□ 1.23
THBS3-204ENST00000460050 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
THBS3-204ENST00000460050 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms