RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 NPM1P06748 294 aaKnown RBP eCLIP21.69■■□□□ 1.06
GPNMB-204ENST00000459927 FAM69CQ0P6D2 419 aa21.63■■□□□ 1.05
GPNMB-204ENST00000459927 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
GPNMB-204ENST00000459927 KIAA0586Q9BVV6 1533 aa21.59■■□□□ 1.05
GPNMB-204ENST00000459927 KIF13AQ9H1H9 1805 aa21.56■■□□□ 1.04
GPNMB-204ENST00000459927 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
GPNMB-204ENST00000459927 ABCC10Q5T3U5 1492 aa21.52■■□□□ 1.04
GPNMB-204ENST00000459927 CARMIL1Q5VZK9 1371 aa21.52■■□□□ 1.04
GPNMB-204ENST00000459927 PTPRGP23470 1445 aa21.46■■□□□ 1.03
GPNMB-204ENST00000459927 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
GPNMB-204ENST00000459927 ADCY10Q96PN6 1610 aa21.45■■□□□ 1.02
GPNMB-204ENST00000459927 CUL7Q14999 1698 aa21.45■■□□□ 1.02
GPNMB-204ENST00000459927 TTBK1Q5TCY1 1321 aaPredicted RBP21.45■■□□□ 1.02
GPNMB-204ENST00000459927 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
GPNMB-204ENST00000459927 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
GPNMB-204ENST00000459927 DIP2BQ9P265 1576 aa21.37■■□□□ 1.01
GPNMB-204ENST00000459927 TSPOAP1O95153 1857 aa21.28■■□□□ 1
GPNMB-204ENST00000459927 KDM4FA0A1W2PPD8 638 aa21.28■■□□□ 1
GPNMB-204ENST00000459927 ABCC2Q92887 1545 aa21.28■■□□□ 1
GPNMB-204ENST00000459927 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
GPNMB-204ENST00000459927 IQGAP2Q13576 1575 aa21.26■□□□□ 0.99
GPNMB-204ENST00000459927 ASXL2Q76L83 1435 aa21.25■□□□□ 0.99
GPNMB-204ENST00000459927 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
GPNMB-204ENST00000459927 UHRF1BP1LA0JNW5 1464 aa21.24■□□□□ 0.99
GPNMB-204ENST00000459927 PLB1Q6P1J6 1458 aa21.24■□□□□ 0.99
GPNMB-204ENST00000459927 DISP1Q96F81 1524 aa21.24■□□□□ 0.99
GPNMB-204ENST00000459927 KDM6BO15054 1643 aa21.23■□□□□ 0.99
GPNMB-204ENST00000459927 UGGT2Q9NYU1 1516 aa21.17■□□□□ 0.98
GPNMB-204ENST00000459927 GLI2P10070 1586 aa21.17■□□□□ 0.98
GPNMB-204ENST00000459927 KDM5BQ9UGL1 1544 aa21.15■□□□□ 0.98
GPNMB-204ENST00000459927 EPRSP07814 1512 aaKnown RBP21.1■□□□□ 0.97
GPNMB-204ENST00000459927 COL17A1Q9UMD9 1497 aaPredicted RBP21.09■□□□□ 0.97
GPNMB-204ENST00000459927 PPRC1Q5VV67 1664 aaKnown RBP21.09■□□□□ 0.97
GPNMB-204ENST00000459927 KIAA0556O60303 1618 aa21.06■□□□□ 0.96
GPNMB-204ENST00000459927 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
GPNMB-204ENST00000459927 ZCCHC11Q5TAX3 1644 aaKnown RBP21.03■□□□□ 0.96
GPNMB-204ENST00000459927 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
GPNMB-204ENST00000459927 GOLGA3Q08378 1498 aa21■□□□□ 0.95
GPNMB-204ENST00000459927 PRXQ9BXM0 1461 aa21■□□□□ 0.95
GPNMB-204ENST00000459927 TEX14Q8IWB6 1497 aa20.99■□□□□ 0.95
GPNMB-204ENST00000459927 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
GPNMB-204ENST00000459927 WDR7Q9Y4E6 1490 aa20.97■□□□□ 0.95
GPNMB-204ENST00000459927 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
GPNMB-204ENST00000459927 CD109Q6YHK3 1445 aa20.95■□□□□ 0.94
GPNMB-204ENST00000459927 CTTNBP2Q8WZ74 1663 aa20.94■□□□□ 0.94
GPNMB-204ENST00000459927 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
GPNMB-204ENST00000459927 ABCA8O94911 1581 aa20.93■□□□□ 0.94
GPNMB-204ENST00000459927 ADGRL1O94910 1474 aa20.92■□□□□ 0.94
GPNMB-204ENST00000459927 MAGI3Q5TCQ9 1506 aa20.88■□□□□ 0.93
GPNMB-204ENST00000459927 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
GPNMB-204ENST00000459927 ATP10BO94823 1461 aa20.85■□□□□ 0.93
GPNMB-204ENST00000459927 CFAP43Q8NDM7 1665 aa20.82■□□□□ 0.92
GPNMB-204ENST00000459927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
GPNMB-204ENST00000459927 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
GPNMB-204ENST00000459927 ILDR1Q86SU0 546 aaPredicted RBP20.77■□□□□ 0.92
GPNMB-204ENST00000459927 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
GPNMB-204ENST00000459927 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
GPNMB-204ENST00000459927 ARAP3Q8WWN8 1544 aa20.74■□□□□ 0.91
GPNMB-204ENST00000459927 RAPGEF3O95398 923 aa20.72■□□□□ 0.91
GPNMB-204ENST00000459927 PLEKHD1A6NEE1 506 aa20.69■□□□□ 0.9
GPNMB-204ENST00000459927 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
GPNMB-204ENST00000459927 EEA1Q15075 1411 aa20.66■□□□□ 0.9
GPNMB-204ENST00000459927 ABCA9Q8IUA7 1624 aa20.65■□□□□ 0.9
GPNMB-204ENST00000459927 RAPGEF6Q8TEU7 1601 aa20.64■□□□□ 0.9
GPNMB-204ENST00000459927 HECW2Q9P2P5 1572 aa20.63■□□□□ 0.89
GPNMB-204ENST00000459927 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
GPNMB-204ENST00000459927 NEO1Q92859 1461 aa20.61■□□□□ 0.89
GPNMB-204ENST00000459927 FHOD3Q2V2M9 1422 aa20.61■□□□□ 0.89
GPNMB-204ENST00000459927 KIF21BO75037 1637 aa20.59■□□□□ 0.89
GPNMB-204ENST00000459927 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
GPNMB-204ENST00000459927 AKNAQ7Z591 1439 aa20.52■□□□□ 0.87
GPNMB-204ENST00000459927 UBTFP17480 764 aaKnown RBP20.51■□□□□ 0.87
GPNMB-204ENST00000459927 PTPRMP28827 1452 aa20.5■□□□□ 0.87
GPNMB-204ENST00000459927 ADAMTSL3P82987 1691 aa20.5■□□□□ 0.87
GPNMB-204ENST00000459927 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
GPNMB-204ENST00000459927 DENND4BO75064 1496 aaPredicted RBP20.49■□□□□ 0.87
GPNMB-204ENST00000459927 ATP1B4Q9UN42 357 aaPredicted RBP20.47■□□□□ 0.87
GPNMB-204ENST00000459927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.46■□□□□ 0.87
GPNMB-204ENST00000459927 FANCAO15360 1455 aa20.45■□□□□ 0.86
GPNMB-204ENST00000459927 FRMPD1Q5SYB0 1578 aa20.45■□□□□ 0.86
GPNMB-204ENST00000459927 EFCAB5A4FU69 1503 aa20.44■□□□□ 0.86
GPNMB-204ENST00000459927 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
GPNMB-204ENST00000459927 BCORL1Q5H9F3 1711 aa20.41■□□□□ 0.86
GPNMB-204ENST00000459927 PLCH2O75038 1416 aa20.4■□□□□ 0.86
GPNMB-204ENST00000459927 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
GPNMB-204ENST00000459927 EFCAB2Q5VUJ9 269 aa20.39■□□□□ 0.85
GPNMB-204ENST00000459927 RICTORQ6R327 1708 aa20.38■□□□□ 0.85
GPNMB-204ENST00000459927 CDK13Q14004 1512 aaKnown RBP20.37■□□□□ 0.85
GPNMB-204ENST00000459927 SCAPERQ9BY12 1400 aa20.37■□□□□ 0.85
GPNMB-204ENST00000459927 FBXO41Q8TF61 875 aa20.37■□□□□ 0.85
GPNMB-204ENST00000459927 MLECQ14165 292 aa20.36■□□□□ 0.85
GPNMB-204ENST00000459927 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
GPNMB-204ENST00000459927 TTC37Q6PGP7 1564 aa20.35■□□□□ 0.85
GPNMB-204ENST00000459927 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
GPNMB-204ENST00000459927 FMN1Q68DA7 1419 aa20.35■□□□□ 0.85
GPNMB-204ENST00000459927 YEATS2Q9ULM3 1422 aa20.35■□□□□ 0.85
GPNMB-204ENST00000459927 MAGI2Q86UL8 1455 aa20.34■□□□□ 0.85
GPNMB-204ENST00000459927 POGZQ7Z3K3 1410 aa20.34■□□□□ 0.85
GPNMB-204ENST00000459927 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
GPNMB-204ENST00000459927 ARHGAP35Q9NRY4 1499 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms