RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 JPH4Q96JJ6 628 aa26.79■■□□□ 1.88
LMNA-209ENST00000459904 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
LMNA-209ENST00000459904 IGF1RP08069 1367 aa26.61■■□□□ 1.85
LMNA-209ENST00000459904 TSPOAP1O95153 1857 aa26.61■■□□□ 1.85
LMNA-209ENST00000459904 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.85
LMNA-209ENST00000459904 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.85
LMNA-209ENST00000459904 CUL7Q14999 1698 aa26.57■■□□□ 1.84
LMNA-209ENST00000459904 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
LMNA-209ENST00000459904 KIAA0586Q9BVV6 1533 aa26.54■■□□□ 1.84
LMNA-209ENST00000459904 DIP2BQ9P265 1576 aa26.54■■□□□ 1.84
LMNA-209ENST00000459904 ABCC10Q5T3U5 1492 aa26.53■■□□□ 1.84
LMNA-209ENST00000459904 NPM1P06748 294 aaKnown RBP eCLIP26.51■■□□□ 1.83
LMNA-209ENST00000459904 MAPKBP1O60336 1514 aa26.49■■□□□ 1.83
LMNA-209ENST00000459904 CARMIL1Q5VZK9 1371 aa26.43■■□□□ 1.82
LMNA-209ENST00000459904 PTPRGP23470 1445 aa26.37■■□□□ 1.81
LMNA-209ENST00000459904 KDM6BO15054 1643 aa26.36■■□□□ 1.81
LMNA-209ENST00000459904 IQGAP2Q13576 1575 aa26.33■■□□□ 1.81
LMNA-209ENST00000459904 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
LMNA-209ENST00000459904 PPRC1Q5VV67 1664 aaKnown RBP26.26■■□□□ 1.79
LMNA-209ENST00000459904 CARMIL2Q6F5E8 1435 aa26.25■■□□□ 1.79
LMNA-209ENST00000459904 ABCC2Q92887 1545 aa26.24■■□□□ 1.79
LMNA-209ENST00000459904 DISP1Q96F81 1524 aa26.24■■□□□ 1.79
LMNA-209ENST00000459904 ASXL2Q76L83 1435 aa26.22■■□□□ 1.79
LMNA-209ENST00000459904 KDM4FA0A1W2PPD8 638 aa26.21■■□□□ 1.79
LMNA-209ENST00000459904 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
LMNA-209ENST00000459904 RAPGEF2Q9Y4G8 1499 aa26.15■■□□□ 1.78
LMNA-209ENST00000459904 ZCCHC11Q5TAX3 1644 aaKnown RBP26.14■■□□□ 1.78
LMNA-209ENST00000459904 KIAA0556O60303 1618 aa26.12■■□□□ 1.77
LMNA-209ENST00000459904 UHRF1BP1LA0JNW5 1464 aa26.11■■□□□ 1.77
LMNA-209ENST00000459904 PLB1Q6P1J6 1458 aa26.11■■□□□ 1.77
LMNA-209ENST00000459904 UGGT2Q9NYU1 1516 aa26.1■■□□□ 1.77
LMNA-209ENST00000459904 CTTNBP2Q8WZ74 1663 aa26.1■■□□□ 1.77
LMNA-209ENST00000459904 GLI2P10070 1586 aa26.1■■□□□ 1.77
LMNA-209ENST00000459904 EPRSP07814 1512 aaKnown RBP26.05■■□□□ 1.76
LMNA-209ENST00000459904 MAP3K4Q9Y6R4 1608 aa26.05■■□□□ 1.76
LMNA-209ENST00000459904 COL17A1Q9UMD9 1497 aaPredicted RBP26.04■■□□□ 1.76
LMNA-209ENST00000459904 KDM5BQ9UGL1 1544 aa26.04■■□□□ 1.76
LMNA-209ENST00000459904 ADGRL1O94910 1474 aa25.93■■□□□ 1.74
LMNA-209ENST00000459904 KCNH8Q96L42 1107 aa25.89■■□□□ 1.74
LMNA-209ENST00000459904 WDR7Q9Y4E6 1490 aa25.89■■□□□ 1.73
LMNA-209ENST00000459904 ABCA8O94911 1581 aa25.88■■□□□ 1.73
LMNA-209ENST00000459904 ARID3CA6NKF2 412 aa25.88■■□□□ 1.73
LMNA-209ENST00000459904 P3H3Q8IVL6 736 aa25.85■■□□□ 1.73
LMNA-209ENST00000459904 TEX14Q8IWB6 1497 aa25.85■■□□□ 1.73
LMNA-209ENST00000459904 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
LMNA-209ENST00000459904 GOLGA3Q08378 1498 aa25.81■■□□□ 1.72
LMNA-209ENST00000459904 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
LMNA-209ENST00000459904 CD109Q6YHK3 1445 aa25.77■■□□□ 1.72
LMNA-209ENST00000459904 KIF21BO75037 1637 aa25.7■■□□□ 1.71
LMNA-209ENST00000459904 MAGI3Q5TCQ9 1506 aa25.69■■□□□ 1.7
LMNA-209ENST00000459904 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
LMNA-209ENST00000459904 HECW2Q9P2P5 1572 aa25.68■■□□□ 1.7
LMNA-209ENST00000459904 ATP10BO94823 1461 aa25.66■■□□□ 1.7
LMNA-209ENST00000459904 ILDR1Q86SU0 546 aaPredicted RBP25.63■■□□□ 1.69
LMNA-209ENST00000459904 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
LMNA-209ENST00000459904 RAPGEF6Q8TEU7 1601 aa25.6■■□□□ 1.69
LMNA-209ENST00000459904 CSRNP3Q8WYN3 585 aa25.59■■□□□ 1.69
LMNA-209ENST00000459904 ABCA9Q8IUA7 1624 aa25.56■■□□□ 1.68
LMNA-209ENST00000459904 FAM9AQ8IZU1 332 aaPredicted RBP25.56■■□□□ 1.68
LMNA-209ENST00000459904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
LMNA-209ENST00000459904 HNRNPUL2Q1KMD3 747 aaKnown RBP25.53■■□□□ 1.68
LMNA-209ENST00000459904 FHOD3Q2V2M9 1422 aa25.51■■□□□ 1.67
LMNA-209ENST00000459904 ARAP3Q8WWN8 1544 aa25.51■■□□□ 1.67
LMNA-209ENST00000459904 RAPGEF3O95398 923 aa25.5■■□□□ 1.67
LMNA-209ENST00000459904 NUP153P49790 1475 aaKnown RBP25.47■■□□□ 1.67
LMNA-209ENST00000459904 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
LMNA-209ENST00000459904 FRMPD1Q5SYB0 1578 aa25.45■■□□□ 1.66
LMNA-209ENST00000459904 ADAMTSL3P82987 1691 aa25.4■■□□□ 1.66
LMNA-209ENST00000459904 BCORL1Q5H9F3 1711 aa25.35■■□□□ 1.65
LMNA-209ENST00000459904 NEO1Q92859 1461 aa25.34■■□□□ 1.65
LMNA-209ENST00000459904 RICTORQ6R327 1708 aa25.34■■□□□ 1.65
LMNA-209ENST00000459904 MADDQ8WXG6 1647 aa25.34■■□□□ 1.65
LMNA-209ENST00000459904 PTPRMP28827 1452 aa25.33■■□□□ 1.65
LMNA-209ENST00000459904 TTC37Q6PGP7 1564 aa25.32■■□□□ 1.64
LMNA-209ENST00000459904 CDK13Q14004 1512 aaKnown RBP25.32■■□□□ 1.64
LMNA-209ENST00000459904 ARID4BQ4LE39 1312 aaPredicted RBP25.31■■□□□ 1.64
LMNA-209ENST00000459904 EEA1Q15075 1411 aa25.3■■□□□ 1.64
LMNA-209ENST00000459904 SIGLEC1Q9BZZ2 1709 aa25.3■■□□□ 1.64
LMNA-209ENST00000459904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.3■■□□□ 1.64
LMNA-209ENST00000459904 PHLDB1Q86UU1 1377 aa25.3■■□□□ 1.64
LMNA-209ENST00000459904 RIMS1Q86UR5 1692 aaKnown RBP25.29■■□□□ 1.64
LMNA-209ENST00000459904 PLEKHD1A6NEE1 506 aa25.28■■□□□ 1.64
LMNA-209ENST00000459904 PLPPR3Q6T4P5 718 aa25.26■■□□□ 1.63
LMNA-209ENST00000459904 AKNAQ7Z591 1439 aa25.25■■□□□ 1.63
LMNA-209ENST00000459904 ARHGEF40Q8TER5 1519 aa25.24■■□□□ 1.63
LMNA-209ENST00000459904 FANCAO15360 1455 aa25.23■■□□□ 1.63
LMNA-209ENST00000459904 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
LMNA-209ENST00000459904 DENND4BO75064 1496 aaPredicted RBP25.22■■□□□ 1.63
LMNA-209ENST00000459904 ATP1B4Q9UN42 357 aaPredicted RBP25.21■■□□□ 1.63
LMNA-209ENST00000459904 CFAP74Q9C0B2 1584 aa25.19■■□□□ 1.62
LMNA-209ENST00000459904 YEATS2Q9ULM3 1422 aa25.18■■□□□ 1.62
LMNA-209ENST00000459904 LRRIQ1Q96JM4 1722 aa25.15■■□□□ 1.62
LMNA-209ENST00000459904 UBTFP17480 764 aaKnown RBP25.15■■□□□ 1.62
LMNA-209ENST00000459904 HECW1Q76N89 1606 aa25.14■■□□□ 1.61
LMNA-209ENST00000459904 MLECQ14165 292 aa25.13■■□□□ 1.61
LMNA-209ENST00000459904 PCF11O94913 1555 aaKnown RBP25.13■■□□□ 1.61
LMNA-209ENST00000459904 LMTK3Q96Q04 1460 aa25.12■■□□□ 1.61
LMNA-209ENST00000459904 KIF14Q15058 1648 aa25.12■■□□□ 1.61
LMNA-209ENST00000459904 ZFYVE16Q7Z3T8 1539 aa25.12■■□□□ 1.61
LMNA-209ENST00000459904 MYO5CQ9NQX4 1742 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms