RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
SCNM1-203ENST00000459799 KDM6BO15054 1643 aa16.97■□□□□ 0.31
SCNM1-203ENST00000459799 MAPKBP1O60336 1514 aa16.96■□□□□ 0.3
SCNM1-203ENST00000459799 ADCY10Q96PN6 1610 aa16.89■□□□□ 0.29
SCNM1-203ENST00000459799 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
SCNM1-203ENST00000459799 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
SCNM1-203ENST00000459799 PRG4Q92954 1404 aaPredicted RBP16.88■□□□□ 0.29
SCNM1-203ENST00000459799 TSPOAP1O95153 1857 aa16.87■□□□□ 0.29
SCNM1-203ENST00000459799 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
SCNM1-203ENST00000459799 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.28
SCNM1-203ENST00000459799 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
SCNM1-203ENST00000459799 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
SCNM1-203ENST00000459799 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
SCNM1-203ENST00000459799 ADGRL1O94910 1474 aa16.78■□□□□ 0.28
SCNM1-203ENST00000459799 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
SCNM1-203ENST00000459799 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
SCNM1-203ENST00000459799 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
SCNM1-203ENST00000459799 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
SCNM1-203ENST00000459799 GLI2P10070 1586 aa16.64■□□□□ 0.25
SCNM1-203ENST00000459799 MSH5O43196 834 aa16.62■□□□□ 0.25
SCNM1-203ENST00000459799 COL17A1Q9UMD9 1497 aaPredicted RBP16.6■□□□□ 0.25
SCNM1-203ENST00000459799 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
SCNM1-203ENST00000459799 ABCC2Q92887 1545 aa16.58■□□□□ 0.24
SCNM1-203ENST00000459799 CUL7Q14999 1698 aa16.57■□□□□ 0.24
SCNM1-203ENST00000459799 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
SCNM1-203ENST00000459799 ASXL2Q76L83 1435 aa16.56■□□□□ 0.24
SCNM1-203ENST00000459799 PLB1Q6P1J6 1458 aa16.54■□□□□ 0.24
SCNM1-203ENST00000459799 PTPRGP23470 1445 aa16.5■□□□□ 0.23
SCNM1-203ENST00000459799 FBXO41Q8TF61 875 aa16.49■□□□□ 0.23
SCNM1-203ENST00000459799 EPRSP07814 1512 aaKnown RBP16.48■□□□□ 0.23
SCNM1-203ENST00000459799 UHRF1BP1LA0JNW5 1464 aa16.48■□□□□ 0.23
SCNM1-203ENST00000459799 TEX14Q8IWB6 1497 aa16.47■□□□□ 0.23
SCNM1-203ENST00000459799 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
SCNM1-203ENST00000459799 ZCCHC11Q5TAX3 1644 aaKnown RBP16.43■□□□□ 0.22
SCNM1-203ENST00000459799 KDM5BQ9UGL1 1544 aa16.41■□□□□ 0.22
SCNM1-203ENST00000459799 KIF21BO75037 1637 aa16.41■□□□□ 0.22
SCNM1-203ENST00000459799 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
SCNM1-203ENST00000459799 CARMIL2Q6F5E8 1435 aa16.39■□□□□ 0.21
SCNM1-203ENST00000459799 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
SCNM1-203ENST00000459799 IGF1RP08069 1367 aa16.38■□□□□ 0.21
SCNM1-203ENST00000459799 UACAQ9BZF9 1416 aa16.38■□□□□ 0.21
SCNM1-203ENST00000459799 DISP1Q96F81 1524 aa16.35■□□□□ 0.21
SCNM1-203ENST00000459799 CFAP43Q8NDM7 1665 aa16.33■□□□□ 0.2
SCNM1-203ENST00000459799 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
SCNM1-203ENST00000459799 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
SCNM1-203ENST00000459799 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
SCNM1-203ENST00000459799 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
SCNM1-203ENST00000459799 LMTK3Q96Q04 1460 aa16.29■□□□□ 0.2
SCNM1-203ENST00000459799 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
SCNM1-203ENST00000459799 PTPRMP28827 1452 aa16.27■□□□□ 0.19
SCNM1-203ENST00000459799 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
SCNM1-203ENST00000459799 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
SCNM1-203ENST00000459799 UGGT2Q9NYU1 1516 aa16.25■□□□□ 0.19
SCNM1-203ENST00000459799 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
SCNM1-203ENST00000459799 CD109Q6YHK3 1445 aa16.22■□□□□ 0.19
SCNM1-203ENST00000459799 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
SCNM1-203ENST00000459799 ARAP3Q8WWN8 1544 aa16.19■□□□□ 0.18
SCNM1-203ENST00000459799 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
SCNM1-203ENST00000459799 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
SCNM1-203ENST00000459799 ABCA8O94911 1581 aa16.15■□□□□ 0.18
SCNM1-203ENST00000459799 FRMPD1Q5SYB0 1578 aa16.12■□□□□ 0.17
SCNM1-203ENST00000459799 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
SCNM1-203ENST00000459799 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
SCNM1-203ENST00000459799 CTTNBP2Q8WZ74 1663 aa16.1■□□□□ 0.17
SCNM1-203ENST00000459799 SOCS7O14512 581 aa16.09■□□□□ 0.17
SCNM1-203ENST00000459799 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.16
SCNM1-203ENST00000459799 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
SCNM1-203ENST00000459799 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
SCNM1-203ENST00000459799 ARHGEF40Q8TER5 1519 aa16.05■□□□□ 0.16
SCNM1-203ENST00000459799 DISP3Q9P2K9 1392 aa16.04■□□□□ 0.16
SCNM1-203ENST00000459799 SPATA31D1Q6ZQQ2 1576 aa16.02■□□□□ 0.16
SCNM1-203ENST00000459799 CERKQ8TCT0 537 aa16.02■□□□□ 0.16
SCNM1-203ENST00000459799 HSPA2P54652 639 aa16.01■□□□□ 0.15
SCNM1-203ENST00000459799 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
SCNM1-203ENST00000459799 GOLGA3Q08378 1498 aa16■□□□□ 0.15
SCNM1-203ENST00000459799 NEO1Q92859 1461 aa16■□□□□ 0.15
SCNM1-203ENST00000459799 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
SCNM1-203ENST00000459799 RAPGEF3O95398 923 aa15.99■□□□□ 0.15
SCNM1-203ENST00000459799 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
SCNM1-203ENST00000459799 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
SCNM1-203ENST00000459799 ARID4BQ4LE39 1312 aaPredicted RBP15.94■□□□□ 0.14
SCNM1-203ENST00000459799 ATP10BO94823 1461 aa15.94■□□□□ 0.14
SCNM1-203ENST00000459799 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
SCNM1-203ENST00000459799 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
SCNM1-203ENST00000459799 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
SCNM1-203ENST00000459799 ZMYM4Q5VZL5 1548 aa15.9■□□□□ 0.14
SCNM1-203ENST00000459799 FANCAO15360 1455 aa15.9■□□□□ 0.14
SCNM1-203ENST00000459799 STRCQ7RTU9 1775 aa15.9■□□□□ 0.14
SCNM1-203ENST00000459799 ARID3CA6NKF2 412 aa15.88■□□□□ 0.13
SCNM1-203ENST00000459799 ADRA2BP18089 450 aa15.87■□□□□ 0.13
SCNM1-203ENST00000459799 FHOD3Q2V2M9 1422 aa15.85■□□□□ 0.13
SCNM1-203ENST00000459799 DENND4BO75064 1496 aaPredicted RBP15.85■□□□□ 0.13
SCNM1-203ENST00000459799 ZFYVE16Q7Z3T8 1539 aa15.85■□□□□ 0.13
SCNM1-203ENST00000459799 CFAP74Q9C0B2 1584 aa15.85■□□□□ 0.13
SCNM1-203ENST00000459799 RAPGEF6Q8TEU7 1601 aa15.85■□□□□ 0.13
SCNM1-203ENST00000459799 POGZQ7Z3K3 1410 aa15.85■□□□□ 0.13
SCNM1-203ENST00000459799 EFCAB5A4FU69 1503 aa15.84■□□□□ 0.13
SCNM1-203ENST00000459799 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
SCNM1-203ENST00000459799 AKNAQ7Z591 1439 aa15.84■□□□□ 0.13
SCNM1-203ENST00000459799 YEATS2Q9ULM3 1422 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms