RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
HDLBP-227ENST00000458564 KIAA0586Q9BVV6 1533 aa18.47■□□□□ 0.55
HDLBP-227ENST00000458564 IGF1RP08069 1367 aa18.46■□□□□ 0.55
HDLBP-227ENST00000458564 MAPKBP1O60336 1514 aa18.46■□□□□ 0.55
HDLBP-227ENST00000458564 KIF27Q86VH2 1401 aa18.46■□□□□ 0.55
HDLBP-227ENST00000458564 CUL7Q14999 1698 aa18.45■□□□□ 0.54
HDLBP-227ENST00000458564 ABCC10Q5T3U5 1492 aa18.44■□□□□ 0.54
HDLBP-227ENST00000458564 ADCY10Q96PN6 1610 aa18.41■□□□□ 0.54
HDLBP-227ENST00000458564 DIP2BQ9P265 1576 aa18.39■□□□□ 0.53
HDLBP-227ENST00000458564 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
HDLBP-227ENST00000458564 FAM69CQ0P6D2 419 aa18.36■□□□□ 0.53
HDLBP-227ENST00000458564 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
HDLBP-227ENST00000458564 PTPRGP23470 1445 aa18.29■□□□□ 0.52
HDLBP-227ENST00000458564 CARMIL2Q6F5E8 1435 aa18.27■□□□□ 0.52
HDLBP-227ENST00000458564 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
HDLBP-227ENST00000458564 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
HDLBP-227ENST00000458564 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
HDLBP-227ENST00000458564 KDM6BO15054 1643 aa18.23■□□□□ 0.51
HDLBP-227ENST00000458564 UHRF1BP1LA0JNW5 1464 aa18.21■□□□□ 0.51
HDLBP-227ENST00000458564 PLB1Q6P1J6 1458 aa18.19■□□□□ 0.5
HDLBP-227ENST00000458564 DISP1Q96F81 1524 aa18.18■□□□□ 0.5
HDLBP-227ENST00000458564 GLI2P10070 1586 aa18.17■□□□□ 0.5
HDLBP-227ENST00000458564 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
HDLBP-227ENST00000458564 UACAQ9BZF9 1416 aa18.16■□□□□ 0.5
HDLBP-227ENST00000458564 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
HDLBP-227ENST00000458564 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
HDLBP-227ENST00000458564 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
HDLBP-227ENST00000458564 KDM5BQ9UGL1 1544 aa18.13■□□□□ 0.49
HDLBP-227ENST00000458564 TTBK1Q5TCY1 1321 aaPredicted RBP18.11■□□□□ 0.49
HDLBP-227ENST00000458564 PPRC1Q5VV67 1664 aaKnown RBP18.11■□□□□ 0.49
HDLBP-227ENST00000458564 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
HDLBP-227ENST00000458564 KIAA0556O60303 1618 aa18.09■□□□□ 0.49
HDLBP-227ENST00000458564 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.48
HDLBP-227ENST00000458564 MAP3K4Q9Y6R4 1608 aa18.05■□□□□ 0.48
HDLBP-227ENST00000458564 ZCCHC11Q5TAX3 1644 aaKnown RBP18.04■□□□□ 0.48
HDLBP-227ENST00000458564 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
HDLBP-227ENST00000458564 COL17A1Q9UMD9 1497 aaPredicted RBP18■□□□□ 0.47
HDLBP-227ENST00000458564 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
HDLBP-227ENST00000458564 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
HDLBP-227ENST00000458564 GOLGA3Q08378 1498 aa17.99■□□□□ 0.47
HDLBP-227ENST00000458564 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
HDLBP-227ENST00000458564 ABCA8O94911 1581 aa17.95■□□□□ 0.46
HDLBP-227ENST00000458564 ADGRL1O94910 1474 aa17.95■□□□□ 0.46
HDLBP-227ENST00000458564 MAGI3Q5TCQ9 1506 aa17.91■□□□□ 0.46
HDLBP-227ENST00000458564 CFAP43Q8NDM7 1665 aa17.88■□□□□ 0.45
HDLBP-227ENST00000458564 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
HDLBP-227ENST00000458564 KCNH8Q96L42 1107 aa17.78■□□□□ 0.44
HDLBP-227ENST00000458564 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
HDLBP-227ENST00000458564 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.44
HDLBP-227ENST00000458564 ATP10BO94823 1461 aa17.77■□□□□ 0.44
HDLBP-227ENST00000458564 FAM9AQ8IZU1 332 aaPredicted RBP17.75■□□□□ 0.43
HDLBP-227ENST00000458564 ABCA9Q8IUA7 1624 aa17.74■□□□□ 0.43
HDLBP-227ENST00000458564 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
HDLBP-227ENST00000458564 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
HDLBP-227ENST00000458564 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
HDLBP-227ENST00000458564 RAPGEF6Q8TEU7 1601 aa17.7■□□□□ 0.42
HDLBP-227ENST00000458564 EEA1Q15075 1411 aa17.7■□□□□ 0.42
HDLBP-227ENST00000458564 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
HDLBP-227ENST00000458564 KIF21BO75037 1637 aa17.69■□□□□ 0.42
HDLBP-227ENST00000458564 ARID3CA6NKF2 412 aa17.67■□□□□ 0.42
HDLBP-227ENST00000458564 NEO1Q92859 1461 aa17.67■□□□□ 0.42
HDLBP-227ENST00000458564 ILDR1Q86SU0 546 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-227ENST00000458564 NUP153P49790 1475 aaKnown RBP17.66■□□□□ 0.42
HDLBP-227ENST00000458564 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
HDLBP-227ENST00000458564 FRMPD1Q5SYB0 1578 aa17.6■□□□□ 0.41
HDLBP-227ENST00000458564 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
HDLBP-227ENST00000458564 EFCAB5A4FU69 1503 aa17.58■□□□□ 0.41
HDLBP-227ENST00000458564 RAPGEF3O95398 923 aa17.58■□□□□ 0.4
HDLBP-227ENST00000458564 PTPRMP28827 1452 aa17.56■□□□□ 0.4
HDLBP-227ENST00000458564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
HDLBP-227ENST00000458564 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
HDLBP-227ENST00000458564 ARHGEF40Q8TER5 1519 aa17.54■□□□□ 0.4
HDLBP-227ENST00000458564 BCORL1Q5H9F3 1711 aa17.52■□□□□ 0.4
HDLBP-227ENST00000458564 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
HDLBP-227ENST00000458564 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.39
HDLBP-227ENST00000458564 DENND4BO75064 1496 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-227ENST00000458564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.51■□□□□ 0.393e-6■■■■■ 29.2
HDLBP-227ENST00000458564 FANCAO15360 1455 aa17.5■□□□□ 0.39
HDLBP-227ENST00000458564 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
HDLBP-227ENST00000458564 AKNAQ7Z591 1439 aa17.5■□□□□ 0.39
HDLBP-227ENST00000458564 ZMYM4Q5VZL5 1548 aa17.49■□□□□ 0.39
HDLBP-227ENST00000458564 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
HDLBP-227ENST00000458564 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
HDLBP-227ENST00000458564 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
HDLBP-227ENST00000458564 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
HDLBP-227ENST00000458564 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
HDLBP-227ENST00000458564 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
HDLBP-227ENST00000458564 ARID4BQ4LE39 1312 aaPredicted RBP17.44■□□□□ 0.38
HDLBP-227ENST00000458564 LMTK3Q96Q04 1460 aa17.43■□□□□ 0.38
HDLBP-227ENST00000458564 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
HDLBP-227ENST00000458564 PLCH2O75038 1416 aa17.41■□□□□ 0.38
HDLBP-227ENST00000458564 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
HDLBP-227ENST00000458564 POGZQ7Z3K3 1410 aa17.4■□□□□ 0.38
HDLBP-227ENST00000458564 YEATS2Q9ULM3 1422 aa17.39■□□□□ 0.38
HDLBP-227ENST00000458564 HECW1Q76N89 1606 aa17.39■□□□□ 0.37
HDLBP-227ENST00000458564 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
HDLBP-227ENST00000458564 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
HDLBP-227ENST00000458564 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
HDLBP-227ENST00000458564 FBXO41Q8TF61 875 aa17.36■□□□□ 0.37
HDLBP-227ENST00000458564 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms