RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 NUP160Q12769 1436 aa25.81■■□□□ 1.72
UPF3AP2-201ENST00000457924 PPP4R3CPQ6ZMV5 832 aa25.8■■□□□ 1.72
UPF3AP2-201ENST00000457924 TOP2BQ02880 1626 aa25.8■■□□□ 1.72
UPF3AP2-201ENST00000457924 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
UPF3AP2-201ENST00000457924 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
UPF3AP2-201ENST00000457924 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
UPF3AP2-201ENST00000457924 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
UPF3AP2-201ENST00000457924 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
UPF3AP2-201ENST00000457924 JPH4Q96JJ6 628 aa25.57■■□□□ 1.68
UPF3AP2-201ENST00000457924 KIF13AQ9H1H9 1805 aa25.56■■□□□ 1.68
UPF3AP2-201ENST00000457924 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
UPF3AP2-201ENST00000457924 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
UPF3AP2-201ENST00000457924 NPM1P06748 294 aaKnown RBP eCLIP25.45■■□□□ 1.66
UPF3AP2-201ENST00000457924 FAM69CQ0P6D2 419 aa25.41■■□□□ 1.66
UPF3AP2-201ENST00000457924 MAPK8IP2Q13387 824 aaPredicted RBP25.41■■□□□ 1.66
UPF3AP2-201ENST00000457924 ABCC10Q5T3U5 1492 aa25.4■■□□□ 1.66
UPF3AP2-201ENST00000457924 MAPKBP1O60336 1514 aa25.38■■□□□ 1.65
UPF3AP2-201ENST00000457924 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
UPF3AP2-201ENST00000457924 KIAA0586Q9BVV6 1533 aa25.33■■□□□ 1.65
UPF3AP2-201ENST00000457924 DIP2BQ9P265 1576 aa25.32■■□□□ 1.64
UPF3AP2-201ENST00000457924 CUL7Q14999 1698 aa25.31■■□□□ 1.64
UPF3AP2-201ENST00000457924 IGF1RP08069 1367 aa25.31■■□□□ 1.64
UPF3AP2-201ENST00000457924 KIF27Q86VH2 1401 aa25.3■■□□□ 1.64
UPF3AP2-201ENST00000457924 KDM6BO15054 1643 aa25.21■■□□□ 1.63
UPF3AP2-201ENST00000457924 TSPOAP1O95153 1857 aa25.2■■□□□ 1.62
UPF3AP2-201ENST00000457924 KCNA4P22459 653 aa25.19■■□□□ 1.62
UPF3AP2-201ENST00000457924 PTPRGP23470 1445 aa25.17■■□□□ 1.62
UPF3AP2-201ENST00000457924 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
UPF3AP2-201ENST00000457924 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
UPF3AP2-201ENST00000457924 CARMIL2Q6F5E8 1435 aa25.12■■□□□ 1.61
UPF3AP2-201ENST00000457924 TNIKQ9UKE5 1360 aa25.1■■□□□ 1.61
UPF3AP2-201ENST00000457924 ABCC2Q92887 1545 aa25.07■■□□□ 1.6
UPF3AP2-201ENST00000457924 CNKSR2Q8WXI2 1034 aa25.07■■□□□ 1.6
UPF3AP2-201ENST00000457924 NCBP3Q53F19 620 aaKnown RBP25.06■■□□□ 1.6
UPF3AP2-201ENST00000457924 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
UPF3AP2-201ENST00000457924 KDM4FA0A1W2PPD8 638 aa25.05■■□□□ 1.6
UPF3AP2-201ENST00000457924 DMRT2Q9Y5R5 561 aa25.05■■□□□ 1.6
UPF3AP2-201ENST00000457924 ASXL2Q76L83 1435 aa25.02■■□□□ 1.6
UPF3AP2-201ENST00000457924 PLB1Q6P1J6 1458 aa25.02■■□□□ 1.6
UPF3AP2-201ENST00000457924 UHRF1BP1LA0JNW5 1464 aa24.99■■□□□ 1.59
UPF3AP2-201ENST00000457924 GLI2P10070 1586 aa24.99■■□□□ 1.59
UPF3AP2-201ENST00000457924 UACAQ9BZF9 1416 aa24.97■■□□□ 1.59
UPF3AP2-201ENST00000457924 PPRC1Q5VV67 1664 aaKnown RBP24.95■■□□□ 1.58
UPF3AP2-201ENST00000457924 DISP1Q96F81 1524 aa24.94■■□□□ 1.58
UPF3AP2-201ENST00000457924 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.57
UPF3AP2-201ENST00000457924 UGGT2Q9NYU1 1516 aa24.87■■□□□ 1.57
UPF3AP2-201ENST00000457924 KDM5BQ9UGL1 1544 aa24.87■■□□□ 1.57
UPF3AP2-201ENST00000457924 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
UPF3AP2-201ENST00000457924 ZCCHC11Q5TAX3 1644 aaKnown RBP24.84■■□□□ 1.57
UPF3AP2-201ENST00000457924 MAP3K4Q9Y6R4 1608 aa24.84■■□□□ 1.57
UPF3AP2-201ENST00000457924 KIAA0556O60303 1618 aa24.83■■□□□ 1.57
UPF3AP2-201ENST00000457924 TEX14Q8IWB6 1497 aa24.82■■□□□ 1.56
UPF3AP2-201ENST00000457924 ADGRL1O94910 1474 aa24.8■■□□□ 1.56
UPF3AP2-201ENST00000457924 COL17A1Q9UMD9 1497 aaPredicted RBP24.78■■□□□ 1.56
UPF3AP2-201ENST00000457924 NPM3O75607 178 aaKnown RBP24.77■■□□□ 1.56
UPF3AP2-201ENST00000457924 CTTNBP2Q8WZ74 1663 aa24.72■■□□□ 1.55
UPF3AP2-201ENST00000457924 WDR7Q9Y4E6 1490 aa24.72■■□□□ 1.55
UPF3AP2-201ENST00000457924 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
UPF3AP2-201ENST00000457924 CFAP43Q8NDM7 1665 aa24.62■■□□□ 1.53
UPF3AP2-201ENST00000457924 ABCA8O94911 1581 aa24.62■■□□□ 1.53
UPF3AP2-201ENST00000457924 CD109Q6YHK3 1445 aa24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 ILDR1Q86SU0 546 aaPredicted RBP24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 KCNH8Q96L42 1107 aa24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 RNF216Q9NWF9 866 aaPredicted RBP24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 MAGI3Q5TCQ9 1506 aa24.61■■□□□ 1.53
UPF3AP2-201ENST00000457924 HECW2Q9P2P5 1572 aa24.56■■□□□ 1.52
UPF3AP2-201ENST00000457924 HOXD11P31277 338 aaPredicted RBP24.54■■□□□ 1.52
UPF3AP2-201ENST00000457924 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
UPF3AP2-201ENST00000457924 FAM9AQ8IZU1 332 aaPredicted RBP24.53■■□□□ 1.52
UPF3AP2-201ENST00000457924 POTEDQ86YR6 584 aa24.51■■□□□ 1.51
UPF3AP2-201ENST00000457924 ARID3CA6NKF2 412 aa24.44■■□□□ 1.5
UPF3AP2-201ENST00000457924 KIF21BO75037 1637 aa24.43■■□□□ 1.5
UPF3AP2-201ENST00000457924 ARAP3Q8WWN8 1544 aa24.42■■□□□ 1.5
UPF3AP2-201ENST00000457924 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
UPF3AP2-201ENST00000457924 ATP10BO94823 1461 aa24.4■■□□□ 1.5
UPF3AP2-201ENST00000457924 ABCA9Q8IUA7 1624 aa24.36■■□□□ 1.49
UPF3AP2-201ENST00000457924 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
UPF3AP2-201ENST00000457924 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
UPF3AP2-201ENST00000457924 RAPGEF6Q8TEU7 1601 aa24.32■■□□□ 1.48
UPF3AP2-201ENST00000457924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
UPF3AP2-201ENST00000457924 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
UPF3AP2-201ENST00000457924 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
UPF3AP2-201ENST00000457924 NEO1Q92859 1461 aa24.27■■□□□ 1.48
UPF3AP2-201ENST00000457924 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
UPF3AP2-201ENST00000457924 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
UPF3AP2-201ENST00000457924 PTPRMP28827 1452 aa24.23■■□□□ 1.47
UPF3AP2-201ENST00000457924 NUP153P49790 1475 aaKnown RBP24.19■■□□□ 1.46
UPF3AP2-201ENST00000457924 ARID4BQ4LE39 1312 aaPredicted RBP24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 BCORL1Q5H9F3 1711 aa24.18■■□□□ 1.46
UPF3AP2-201ENST00000457924 PLEKHD1A6NEE1 506 aa24.14■■□□□ 1.45
UPF3AP2-201ENST00000457924 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.45
UPF3AP2-201ENST00000457924 EEA1Q15075 1411 aa24.13■■□□□ 1.45
UPF3AP2-201ENST00000457924 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
UPF3AP2-201ENST00000457924 FBXO41Q8TF61 875 aa24.11■■□□□ 1.45
UPF3AP2-201ENST00000457924 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
UPF3AP2-201ENST00000457924 CFAP74Q9C0B2 1584 aa24.09■■□□□ 1.45
UPF3AP2-201ENST00000457924 ARHGEF40Q8TER5 1519 aa24.09■■□□□ 1.45
UPF3AP2-201ENST00000457924 RICTORQ6R327 1708 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms