RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
CSPG5-203ENST00000456150 KANK4Q5T7N3 995 aaPredicted RBP29.92■■■□□ 2.38
CSPG5-203ENST00000456150 RRBP1Q9P2E9 1410 aaKnown RBP29.91■■■□□ 2.38
CSPG5-203ENST00000456150 ZNF316A6NFI3 1004 aaPredicted RBP29.9■■■□□ 2.38
CSPG5-203ENST00000456150 AQRO60306 1485 aaKnown RBP eCLIP29.9■■■□□ 2.38
CSPG5-203ENST00000456150 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
CSPG5-203ENST00000456150 MAP3K1Q13233 1512 aa29.84■■■□□ 2.37
CSPG5-203ENST00000456150 CLSPNQ9HAW4 1339 aa29.82■■■□□ 2.36
CSPG5-203ENST00000456150 CUL7Q14999 1698 aa29.82■■■□□ 2.36
CSPG5-203ENST00000456150 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
CSPG5-203ENST00000456150 TIAM1Q13009 1591 aa29.77■■■□□ 2.36
CSPG5-203ENST00000456150 CCNB3Q8WWL7 1395 aa29.74■■■□□ 2.35
CSPG5-203ENST00000456150 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
CSPG5-203ENST00000456150 FHAD1B1AJZ9 1412 aa29.72■■■□□ 2.35
CSPG5-203ENST00000456150 GRIN2BQ13224 1484 aa29.71■■■□□ 2.35
CSPG5-203ENST00000456150 DHX57Q6P158 1386 aaKnown RBP29.7■■■□□ 2.35
CSPG5-203ENST00000456150 SCAF1Q9H7N4 1312 aaKnown RBP29.68■■■□□ 2.34
CSPG5-203ENST00000456150 CFAP43Q8NDM7 1665 aa29.64■■■□□ 2.34
CSPG5-203ENST00000456150 EFCAB5A4FU69 1503 aa29.64■■■□□ 2.33
CSPG5-203ENST00000456150 CTTNBP2Q8WZ74 1663 aa29.63■■■□□ 2.33
CSPG5-203ENST00000456150 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
CSPG5-203ENST00000456150 LRRC9Q6ZRR7 1453 aa29.62■■■□□ 2.33
CSPG5-203ENST00000456150 ACIN1Q9UKV3 1341 aaKnown RBP29.6■■■□□ 2.33
CSPG5-203ENST00000456150 CENPBP07199 599 aaPredicted RBP29.59■■■□□ 2.33
CSPG5-203ENST00000456150 PCF11O94913 1555 aaKnown RBP29.59■■■□□ 2.33
CSPG5-203ENST00000456150 SNAPC4Q5SXM2 1469 aa29.58■■■□□ 2.33
CSPG5-203ENST00000456150 FYCO1Q9BQS8 1478 aa29.52■■■□□ 2.32
CSPG5-203ENST00000456150 NEUROD1Q13562 356 aa29.48■■■□□ 2.31
CSPG5-203ENST00000456150 FHOD3Q2V2M9 1422 aa29.47■■■□□ 2.31
CSPG5-203ENST00000456150 CASKIN1Q8WXD9 1431 aa29.45■■■□□ 2.31
CSPG5-203ENST00000456150 MAGI1Q96QZ7 1491 aaPredicted RBP29.44■■■□□ 2.3
CSPG5-203ENST00000456150 P3H3Q8IVL6 736 aa29.43■■■□□ 2.3
CSPG5-203ENST00000456150 PHLDB1Q86UU1 1377 aa29.42■■■□□ 2.3
CSPG5-203ENST00000456150 ITGAEP38570 1179 aa29.4■■■□□ 2.3
CSPG5-203ENST00000456150 FMN1Q68DA7 1419 aa29.39■■■□□ 2.3
CSPG5-203ENST00000456150 RAB3GAP2Q9H2M9 1393 aa29.38■■■□□ 2.29
CSPG5-203ENST00000456150 GRIN2AQ12879 1464 aa29.37■■■□□ 2.29
CSPG5-203ENST00000456150 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
CSPG5-203ENST00000456150 SETD5Q9C0A6 1442 aa29.34■■■□□ 2.29
CSPG5-203ENST00000456150 FBLN2P98095 1184 aa29.33■■■□□ 2.29
CSPG5-203ENST00000456150 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
CSPG5-203ENST00000456150 SAMD9Q5K651 1589 aa29.33■■■□□ 2.29
CSPG5-203ENST00000456150 ATP1B4Q9UN42 357 aaPredicted RBP29.33■■■□□ 2.29
CSPG5-203ENST00000456150 MIER1Q8N108 512 aa29.31■■■□□ 2.28
CSPG5-203ENST00000456150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.29■■■□□ 2.28
CSPG5-203ENST00000456150 FAM50AQ14320 339 aaKnown RBP29.27■■■□□ 2.28
CSPG5-203ENST00000456150 IQGAP2Q13576 1575 aa29.26■■■□□ 2.27
CSPG5-203ENST00000456150 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
CSPG5-203ENST00000456150 CEP170Q5SW79 1584 aa29.23■■■□□ 2.27
CSPG5-203ENST00000456150 KIAA0586Q9BVV6 1533 aa29.19■■■□□ 2.26
CSPG5-203ENST00000456150 GTF3C3Q9Y5Q9 886 aa29.17■■■□□ 2.26
CSPG5-203ENST00000456150 NUP160Q12769 1436 aa29.14■■■□□ 2.26
CSPG5-203ENST00000456150 LRRIQ1Q96JM4 1722 aa29.13■■■□□ 2.25
CSPG5-203ENST00000456150 FGD6Q6ZV73 1430 aa29.13■■■□□ 2.25
CSPG5-203ENST00000456150 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
CSPG5-203ENST00000456150 CHD1O14646 1710 aa29.12■■■□□ 2.25
CSPG5-203ENST00000456150 YTHDC1Q96MU7 727 aaKnown RBP29.11■■■□□ 2.25
CSPG5-203ENST00000456150 UGGT2Q9NYU1 1516 aa29.1■■■□□ 2.25
CSPG5-203ENST00000456150 SUPT6HQ7KZ85 1726 aaKnown RBP29.06■■■□□ 2.24
CSPG5-203ENST00000456150 EHBP1L1Q8N3D4 1523 aa29.06■■■□□ 2.24
CSPG5-203ENST00000456150 PELP1Q8IZL8 1130 aaKnown RBP29.06■■■□□ 2.24
CSPG5-203ENST00000456150 DISP1Q96F81 1524 aa29.02■■■□□ 2.24
CSPG5-203ENST00000456150 CCDC18Q5T9S5 1454 aa29.02■■■□□ 2.24
CSPG5-203ENST00000456150 NCOA2Q15596 1464 aa29.01■■■□□ 2.23
CSPG5-203ENST00000456150 TIMELESSQ9UNS1 1208 aa28.99■■■□□ 2.23
CSPG5-203ENST00000456150 MYOM3Q5VTT5 1437 aa28.99■■■□□ 2.23
CSPG5-203ENST00000456150 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
CSPG5-203ENST00000456150 HECW1Q76N89 1606 aa28.97■■■□□ 2.23
CSPG5-203ENST00000456150 JPH4Q96JJ6 628 aa28.97■■■□□ 2.23
CSPG5-203ENST00000456150 HFM1A2PYH4 1435 aa28.93■■■□□ 2.22
CSPG5-203ENST00000456150 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
CSPG5-203ENST00000456150 PTPN23Q9H3S7 1636 aa28.9■■■□□ 2.22
CSPG5-203ENST00000456150 SIN3AQ96ST3 1273 aa28.88■■■□□ 2.21
CSPG5-203ENST00000456150 PTPRKQ15262 1439 aa28.85■■■□□ 2.21
CSPG5-203ENST00000456150 MAGI3Q5TCQ9 1506 aa28.85■■■□□ 2.21
CSPG5-203ENST00000456150 UACAQ9BZF9 1416 aa28.84■■■□□ 2.21
CSPG5-203ENST00000456150 EPRSP07814 1512 aaKnown RBP28.81■■■□□ 2.2
CSPG5-203ENST00000456150 CARMIL2Q6F5E8 1435 aa28.8■■■□□ 2.2
CSPG5-203ENST00000456150 TCOF1Q13428 1488 aaKnown RBP28.8■■■□□ 2.2
CSPG5-203ENST00000456150 NAIPQ13075 1403 aa28.8■■■□□ 2.2
CSPG5-203ENST00000456150 PRG4Q92954 1404 aaPredicted RBP28.79■■■□□ 2.2
CSPG5-203ENST00000456150 SHROOM2Q13796 1616 aa28.74■■■□□ 2.19
CSPG5-203ENST00000456150 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
CSPG5-203ENST00000456150 PPP1R15AO75807 674 aaPredicted RBP28.73■■■□□ 2.19
CSPG5-203ENST00000456150 GCC2Q8IWJ2 1684 aa28.72■■■□□ 2.19
CSPG5-203ENST00000456150 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
CSPG5-203ENST00000456150 MIA2Q96PC5 1412 aa28.7■■■□□ 2.19
CSPG5-203ENST00000456150 CDK13Q14004 1512 aaKnown RBP28.7■■■□□ 2.19
CSPG5-203ENST00000456150 TONSLQ96HA7 1378 aa28.69■■■□□ 2.18
CSPG5-203ENST00000456150 AKNAQ7Z591 1439 aa28.69■■■□□ 2.18
CSPG5-203ENST00000456150 PLB1Q6P1J6 1458 aa28.69■■■□□ 2.18
CSPG5-203ENST00000456150 ERCC6L2Q5T890 1561 aa28.68■■■□□ 2.18
CSPG5-203ENST00000456150 RAPGEF6Q8TEU7 1601 aa28.68■■■□□ 2.18
CSPG5-203ENST00000456150 NUP153P49790 1475 aaKnown RBP28.64■■■□□ 2.18
CSPG5-203ENST00000456150 PTPRGP23470 1445 aa28.58■■■□□ 2.17
CSPG5-203ENST00000456150 ABCA8O94911 1581 aa28.56■■■□□ 2.16
CSPG5-203ENST00000456150 RRP7BPQ9NSQ0 103 aa28.54■■■□□ 2.16
CSPG5-203ENST00000456150 DDX10Q13206 875 aaKnown RBP28.53■■■□□ 2.16
CSPG5-203ENST00000456150 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
CSPG5-203ENST00000456150 CHIC2Q9UKJ5 165 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms