RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 KIF27Q86VH2 1401 aa29.39■■■□□ 2.3
TVP23A-202ENST00000456096 AEBP2Q6ZN18 517 aaPredicted RBP29.39■■■□□ 2.3
TVP23A-202ENST00000456096 KIF13AQ9H1H9 1805 aa29.37■■■□□ 2.29
TVP23A-202ENST00000456096 KIAA0586Q9BVV6 1533 aa29.33■■■□□ 2.29
TVP23A-202ENST00000456096 CUL7Q14999 1698 aa29.31■■■□□ 2.28
TVP23A-202ENST00000456096 NPM1P06748 294 aaKnown RBP eCLIP29.29■■■□□ 2.28
TVP23A-202ENST00000456096 ADCY10Q96PN6 1610 aa29.25■■■□□ 2.27
TVP23A-202ENST00000456096 FAM69CQ0P6D2 419 aa29.24■■■□□ 2.27
TVP23A-202ENST00000456096 ABCC10Q5T3U5 1492 aa29.23■■■□□ 2.27
TVP23A-202ENST00000456096 MAPKBP1O60336 1514 aa29.21■■■□□ 2.27
TVP23A-202ENST00000456096 CARMIL1Q5VZK9 1371 aa29.21■■■□□ 2.27
TVP23A-202ENST00000456096 DIP2BQ9P265 1576 aa29.13■■■□□ 2.25
TVP23A-202ENST00000456096 PTPRGP23470 1445 aa29.11■■■□□ 2.25
TVP23A-202ENST00000456096 TTBK1Q5TCY1 1321 aaPredicted RBP29.09■■■□□ 2.25
TVP23A-202ENST00000456096 CARMIL2Q6F5E8 1435 aa29.04■■■□□ 2.24
TVP23A-202ENST00000456096 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
TVP23A-202ENST00000456096 IQGAP2Q13576 1575 aa29.02■■■□□ 2.24
TVP23A-202ENST00000456096 TSPOAP1O95153 1857 aa28.98■■■□□ 2.23
TVP23A-202ENST00000456096 ABCC2Q92887 1545 aa28.94■■■□□ 2.22
TVP23A-202ENST00000456096 DISP1Q96F81 1524 aa28.92■■■□□ 2.22
TVP23A-202ENST00000456096 RAPGEF2Q9Y4G8 1499 aa28.91■■■□□ 2.22
TVP23A-202ENST00000456096 KDM6BO15054 1643 aa28.91■■■□□ 2.22
TVP23A-202ENST00000456096 UHRF1BP1LA0JNW5 1464 aa28.88■■■□□ 2.21
TVP23A-202ENST00000456096 ASXL2Q76L83 1435 aa28.87■■■□□ 2.21
TVP23A-202ENST00000456096 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
TVP23A-202ENST00000456096 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
TVP23A-202ENST00000456096 UGGT2Q9NYU1 1516 aa28.84■■■□□ 2.21
TVP23A-202ENST00000456096 GLI2P10070 1586 aa28.79■■■□□ 2.2
TVP23A-202ENST00000456096 KIAA0556O60303 1618 aa28.76■■■□□ 2.2
TVP23A-202ENST00000456096 KDM5BQ9UGL1 1544 aa28.75■■■□□ 2.19
TVP23A-202ENST00000456096 PPRC1Q5VV67 1664 aaKnown RBP28.74■■■□□ 2.19
TVP23A-202ENST00000456096 KDM4FA0A1W2PPD8 638 aa28.74■■■□□ 2.19
TVP23A-202ENST00000456096 EPRSP07814 1512 aaKnown RBP28.69■■■□□ 2.18
TVP23A-202ENST00000456096 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
TVP23A-202ENST00000456096 CTTNBP2Q8WZ74 1663 aa28.67■■■□□ 2.18
TVP23A-202ENST00000456096 MAP3K4Q9Y6R4 1608 aa28.63■■■□□ 2.17
TVP23A-202ENST00000456096 GOLGA3Q08378 1498 aa28.59■■■□□ 2.17
TVP23A-202ENST00000456096 PRXQ9BXM0 1461 aa28.59■■■□□ 2.17
TVP23A-202ENST00000456096 COL17A1Q9UMD9 1497 aaPredicted RBP28.59■■■□□ 2.17
TVP23A-202ENST00000456096 WDR7Q9Y4E6 1490 aa28.56■■■□□ 2.16
TVP23A-202ENST00000456096 TEX14Q8IWB6 1497 aa28.55■■■□□ 2.16
TVP23A-202ENST00000456096 ABCA8O94911 1581 aa28.51■■■□□ 2.15
TVP23A-202ENST00000456096 KCNH8Q96L42 1107 aa28.47■■■□□ 2.15
TVP23A-202ENST00000456096 ADGRL1O94910 1474 aa28.44■■■□□ 2.14
TVP23A-202ENST00000456096 CD109Q6YHK3 1445 aa28.42■■■□□ 2.14
TVP23A-202ENST00000456096 P3H3Q8IVL6 736 aa28.41■■■□□ 2.14
TVP23A-202ENST00000456096 CFAP43Q8NDM7 1665 aa28.38■■■□□ 2.13
TVP23A-202ENST00000456096 MAGI3Q5TCQ9 1506 aa28.38■■■□□ 2.13
TVP23A-202ENST00000456096 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
TVP23A-202ENST00000456096 ARID3CA6NKF2 412 aa28.36■■■□□ 2.13
TVP23A-202ENST00000456096 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
TVP23A-202ENST00000456096 ATP10BO94823 1461 aa28.31■■■□□ 2.12
TVP23A-202ENST00000456096 SAMD9Q5K651 1589 aa28.26■■■□□ 2.11
TVP23A-202ENST00000456096 RAPGEF6Q8TEU7 1601 aa28.18■■■□□ 2.1
TVP23A-202ENST00000456096 RANGAP1P46060 587 aaPredicted RBP28.17■■■□□ 2.1
TVP23A-202ENST00000456096 ARAP3Q8WWN8 1544 aa28.17■■■□□ 2.1
TVP23A-202ENST00000456096 EEA1Q15075 1411 aa28.17■■■□□ 2.1
TVP23A-202ENST00000456096 ABCA9Q8IUA7 1624 aa28.15■■■□□ 2.1
TVP23A-202ENST00000456096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.15■■■□□ 2.1
TVP23A-202ENST00000456096 HNRNPUL2Q1KMD3 747 aaKnown RBP28.15■■■□□ 2.1
TVP23A-202ENST00000456096 KIF21BO75037 1637 aa28.1■■■□□ 2.09
TVP23A-202ENST00000456096 NUP153P49790 1475 aaKnown RBP28.09■■■□□ 2.09
TVP23A-202ENST00000456096 PHLDB1Q86UU1 1377 aa28.09■■■□□ 2.09
TVP23A-202ENST00000456096 FHOD3Q2V2M9 1422 aa28.09■■■□□ 2.09
TVP23A-202ENST00000456096 HECW2Q9P2P5 1572 aa28.08■■■□□ 2.09
TVP23A-202ENST00000456096 RAPGEF3O95398 923 aa28.05■■■□□ 2.08
TVP23A-202ENST00000456096 NEO1Q92859 1461 aa28.02■■■□□ 2.08
TVP23A-202ENST00000456096 ILDR1Q86SU0 546 aaPredicted RBP27.99■■■□□ 2.07
TVP23A-202ENST00000456096 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
TVP23A-202ENST00000456096 EFCAB5A4FU69 1503 aa27.94■■■□□ 2.06
TVP23A-202ENST00000456096 FRMPD1Q5SYB0 1578 aa27.92■■■□□ 2.06
TVP23A-202ENST00000456096 ADAMTSL3P82987 1691 aa27.88■■■□□ 2.05
TVP23A-202ENST00000456096 EHMT2Q96KQ7 1210 aa27.86■■■□□ 2.05
TVP23A-202ENST00000456096 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.86■■■□□ 2.05
TVP23A-202ENST00000456096 PTPRMP28827 1452 aa27.85■■■□□ 2.05
TVP23A-202ENST00000456096 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
TVP23A-202ENST00000456096 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
TVP23A-202ENST00000456096 DENND4BO75064 1496 aaPredicted RBP27.84■■■□□ 2.05
TVP23A-202ENST00000456096 FANCAO15360 1455 aa27.83■■■□□ 2.05
TVP23A-202ENST00000456096 UBTFP17480 764 aaKnown RBP27.82■■■□□ 2.04
TVP23A-202ENST00000456096 TTC37Q6PGP7 1564 aa27.82■■■□□ 2.04
TVP23A-202ENST00000456096 CDK13Q14004 1512 aaKnown RBP27.81■■■□□ 2.04
TVP23A-202ENST00000456096 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
TVP23A-202ENST00000456096 RICTORQ6R327 1708 aa27.81■■■□□ 2.04
TVP23A-202ENST00000456096 CFAP74Q9C0B2 1584 aa27.78■■■□□ 2.04
TVP23A-202ENST00000456096 ARHGEF40Q8TER5 1519 aa27.77■■■□□ 2.04
TVP23A-202ENST00000456096 MADDQ8WXG6 1647 aa27.76■■■□□ 2.03
TVP23A-202ENST00000456096 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
TVP23A-202ENST00000456096 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
TVP23A-202ENST00000456096 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
TVP23A-202ENST00000456096 ARHGAP35Q9NRY4 1499 aa27.7■■■□□ 2.03
TVP23A-202ENST00000456096 PLCH2O75038 1416 aa27.69■■■□□ 2.02
TVP23A-202ENST00000456096 ZMYM4Q5VZL5 1548 aa27.69■■■□□ 2.02
TVP23A-202ENST00000456096 HECW1Q76N89 1606 aa27.67■■■□□ 2.02
TVP23A-202ENST00000456096 YEATS2Q9ULM3 1422 aa27.67■■■□□ 2.02
TVP23A-202ENST00000456096 ZFYVE16Q7Z3T8 1539 aa27.66■■■□□ 2.02
TVP23A-202ENST00000456096 SCAPERQ9BY12 1400 aa27.66■■■□□ 2.02
TVP23A-202ENST00000456096 RIMS1Q86UR5 1692 aaKnown RBP27.65■■■□□ 2.02
TVP23A-202ENST00000456096 MAGI2Q86UL8 1455 aa27.64■■■□□ 2.01
TVP23A-202ENST00000456096 CDK11AQ9UQ88 783 aaPredicted RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms