RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
CSGALNACT1-203ENST00000454498 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
CSGALNACT1-203ENST00000454498 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
CSGALNACT1-203ENST00000454498 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
CSGALNACT1-203ENST00000454498 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.2
CSGALNACT1-203ENST00000454498 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.21
CSGALNACT1-203ENST00000454498 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
CSGALNACT1-203ENST00000454498 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
CSGALNACT1-203ENST00000454498 HNRNPUQ00839 825 aaKnown RBP eCLIP13.75□□□□□ -0.21
CSGALNACT1-203ENST00000454498 MIER1Q8N108 512 aa13.74□□□□□ -0.21
CSGALNACT1-203ENST00000454498 CCNB3Q8WWL7 1395 aa13.74□□□□□ -0.21
CSGALNACT1-203ENST00000454498 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
CSGALNACT1-203ENST00000454498 EIF4G2P78344 907 aaKnown RBP eCLIP13.72□□□□□ -0.21
CSGALNACT1-203ENST00000454498 NEFMP07197 916 aa13.71□□□□□ -0.21
CSGALNACT1-203ENST00000454498 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
CSGALNACT1-203ENST00000454498 EIF4G1Q04637 1599 aaKnown RBP13.7□□□□□ -0.22
CSGALNACT1-203ENST00000454498 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
CSGALNACT1-203ENST00000454498 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
CSGALNACT1-203ENST00000454498 TMC1Q8TDI8 760 aa13.68□□□□□ -0.22
CSGALNACT1-203ENST00000454498 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
CSGALNACT1-203ENST00000454498 CANXP27824 592 aaKnown RBP13.67□□□□□ -0.22
CSGALNACT1-203ENST00000454498 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
CSGALNACT1-203ENST00000454498 FKBP8Q14318 412 aa13.64□□□□□ -0.23
CSGALNACT1-203ENST00000454498 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
CSGALNACT1-203ENST00000454498 RUSC2Q8N2Y8 1516 aa13.63□□□□□ -0.23
CSGALNACT1-203ENST00000454498 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
CSGALNACT1-203ENST00000454498 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
CSGALNACT1-203ENST00000454498 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
CSGALNACT1-203ENST00000454498 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
CSGALNACT1-203ENST00000454498 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
CSGALNACT1-203ENST00000454498 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
CSGALNACT1-203ENST00000454498 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
CSGALNACT1-203ENST00000454498 BCL11AQ9H165 835 aa13.55□□□□□ -0.24
CSGALNACT1-203ENST00000454498 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
CSGALNACT1-203ENST00000454498 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
CSGALNACT1-203ENST00000454498 SETD5Q9C0A6 1442 aa13.54□□□□□ -0.24
CSGALNACT1-203ENST00000454498 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
CSGALNACT1-203ENST00000454498 FHOD3Q2V2M9 1422 aa13.53□□□□□ -0.24
CSGALNACT1-203ENST00000454498 WDR43Q15061 677 aaKnown RBP eCLIP13.53□□□□□ -0.24
CSGALNACT1-203ENST00000454498 NCAPD3P42695 1498 aa13.52□□□□□ -0.25
CSGALNACT1-203ENST00000454498 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
CSGALNACT1-203ENST00000454498 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
CSGALNACT1-203ENST00000454498 PPP1R15AO75807 674 aaPredicted RBP13.48□□□□□ -0.25
CSGALNACT1-203ENST00000454498 JPH4Q96JJ6 628 aa13.47□□□□□ -0.25
CSGALNACT1-203ENST00000454498 IGF1RP08069 1367 aa13.45□□□□□ -0.26
CSGALNACT1-203ENST00000454498 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
CSGALNACT1-203ENST00000454498 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
CSGALNACT1-203ENST00000454498 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
CSGALNACT1-203ENST00000454498 FOXD1Q16676 465 aa13.44□□□□□ -0.26
CSGALNACT1-203ENST00000454498 ARID4BQ4LE39 1312 aaPredicted RBP13.44□□□□□ -0.26
CSGALNACT1-203ENST00000454498 PKD2Q13563 968 aa13.44□□□□□ -0.26
CSGALNACT1-203ENST00000454498 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
CSGALNACT1-203ENST00000454498 IRX6P78412 446 aaPredicted RBP13.43□□□□□ -0.26
CSGALNACT1-203ENST00000454498 ANP32AP39687 249 aaKnown RBP13.42□□□□□ -0.26
CSGALNACT1-203ENST00000454498 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
CSGALNACT1-203ENST00000454498 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
CSGALNACT1-203ENST00000454498 EFCAB2Q5VUJ9 269 aa13.4□□□□□ -0.26
CSGALNACT1-203ENST00000454498 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
CSGALNACT1-203ENST00000454498 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
CSGALNACT1-203ENST00000454498 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
CSGALNACT1-203ENST00000454498 RAD54L2Q9Y4B4 1467 aa13.39□□□□□ -0.27
CSGALNACT1-203ENST00000454498 NUP155O75694 1391 aa13.37□□□□□ -0.27
CSGALNACT1-203ENST00000454498 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
CSGALNACT1-203ENST00000454498 ANKRD30AQ9BXX3 1397 aa13.36□□□□□ -0.27
CSGALNACT1-203ENST00000454498 GGT6Q6P531 493 aa13.36□□□□□ -0.27
CSGALNACT1-203ENST00000454498 KANK1Q14678 1352 aa13.36□□□□□ -0.27
CSGALNACT1-203ENST00000454498 CCDC18Q5T9S5 1454 aa13.35□□□□□ -0.27
CSGALNACT1-203ENST00000454498 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT1-203ENST00000454498 HNRNPMP52272 730 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSGALNACT1-203ENST00000454498 CFTRP13569 1480 aa13.33□□□□□ -0.28
CSGALNACT1-203ENST00000454498 POGKQ9P215 609 aa13.32□□□□□ -0.28
CSGALNACT1-203ENST00000454498 CFAP53Q96M91 514 aa13.31□□□□□ -0.28
CSGALNACT1-203ENST00000454498 TMF1P82094 1093 aa13.31□□□□□ -0.28
CSGALNACT1-203ENST00000454498 SUPT16HQ9Y5B9 1047 aaKnown RBP13.31□□□□□ -0.28
CSGALNACT1-203ENST00000454498 MLECQ14165 292 aa13.31□□□□□ -0.28
CSGALNACT1-203ENST00000454498 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
CSGALNACT1-203ENST00000454498 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
CSGALNACT1-203ENST00000454498 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
CSGALNACT1-203ENST00000454498 C14orf37Q86TY3 774 aa13.29□□□□□ -0.28
CSGALNACT1-203ENST00000454498 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
CSGALNACT1-203ENST00000454498 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
CSGALNACT1-203ENST00000454498 PTPRGP23470 1445 aa13.28□□□□□ -0.28
CSGALNACT1-203ENST00000454498 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
CSGALNACT1-203ENST00000454498 KIF3BO15066 747 aa13.28□□□□□ -0.28
CSGALNACT1-203ENST00000454498 SYNJ1O43426 1573 aa13.27□□□□□ -0.29
CSGALNACT1-203ENST00000454498 UPF2Q9HAU5 1272 aaKnown RBP13.27□□□□□ -0.29
CSGALNACT1-203ENST00000454498 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.29
CSGALNACT1-203ENST00000454498 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
CSGALNACT1-203ENST00000454498 SPAG9O60271 1321 aaKnown RBP13.26□□□□□ -0.29
CSGALNACT1-203ENST00000454498 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
CSGALNACT1-203ENST00000454498 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
CSGALNACT1-203ENST00000454498 NESP48681 1621 aa13.25□□□□□ -0.29
CSGALNACT1-203ENST00000454498 TRHP20396 242 aaPredicted RBP13.24□□□□□ -0.29
CSGALNACT1-203ENST00000454498 KIF21BO75037 1637 aa13.23□□□□□ -0.29
CSGALNACT1-203ENST00000454498 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
CSGALNACT1-203ENST00000454498 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
CSGALNACT1-203ENST00000454498 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
CSGALNACT1-203ENST00000454498 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
CSGALNACT1-203ENST00000454498 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-203ENST00000454498 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms