RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
HLA-DPA3-207ENST00000454398 JPH4Q96JJ6 628 aa10.74□□□□□ -0.69
HLA-DPA3-207ENST00000454398 DIP2BQ9P265 1576 aa10.73□□□□□ -0.69
HLA-DPA3-207ENST00000454398 IGF1RP08069 1367 aa10.71□□□□□ -0.69
HLA-DPA3-207ENST00000454398 TSPOAP1O95153 1857 aa10.7□□□□□ -0.7
HLA-DPA3-207ENST00000454398 ABCC10Q5T3U5 1492 aa10.7□□□□□ -0.7
HLA-DPA3-207ENST00000454398 CUL7Q14999 1698 aa10.69□□□□□ -0.7
HLA-DPA3-207ENST00000454398 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
HLA-DPA3-207ENST00000454398 TTBK1Q5TCY1 1321 aaPredicted RBP10.68□□□□□ -0.7
HLA-DPA3-207ENST00000454398 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
HLA-DPA3-207ENST00000454398 KIAA0586Q9BVV6 1533 aa10.66□□□□□ -0.7
HLA-DPA3-207ENST00000454398 KDM6BO15054 1643 aa10.66□□□□□ -0.7
HLA-DPA3-207ENST00000454398 KIF27Q86VH2 1401 aa10.65□□□□□ -0.7
HLA-DPA3-207ENST00000454398 KDM4FA0A1W2PPD8 638 aa10.64□□□□□ -0.71
HLA-DPA3-207ENST00000454398 PPRC1Q5VV67 1664 aaKnown RBP10.62□□□□□ -0.71
HLA-DPA3-207ENST00000454398 IQGAP2Q13576 1575 aa10.61□□□□□ -0.71
HLA-DPA3-207ENST00000454398 ABCC2Q92887 1545 aa10.59□□□□□ -0.71
HLA-DPA3-207ENST00000454398 DISP1Q96F81 1524 aa10.59□□□□□ -0.71
HLA-DPA3-207ENST00000454398 CARMIL1Q5VZK9 1371 aa10.59□□□□□ -0.71
HLA-DPA3-207ENST00000454398 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
HLA-DPA3-207ENST00000454398 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
HLA-DPA3-207ENST00000454398 PTPRGP23470 1445 aa10.57□□□□□ -0.72
HLA-DPA3-207ENST00000454398 ASXL2Q76L83 1435 aa10.56□□□□□ -0.72
HLA-DPA3-207ENST00000454398 KIAA0556O60303 1618 aa10.55□□□□□ -0.72
HLA-DPA3-207ENST00000454398 ZCCHC11Q5TAX3 1644 aaKnown RBP10.54□□□□□ -0.72
HLA-DPA3-207ENST00000454398 TNIKQ9UKE5 1360 aa10.53□□□□□ -0.72
HLA-DPA3-207ENST00000454398 CARMIL2Q6F5E8 1435 aa10.52□□□□□ -0.73
HLA-DPA3-207ENST00000454398 UHRF1BP1LA0JNW5 1464 aa10.52□□□□□ -0.73
HLA-DPA3-207ENST00000454398 GLI2P10070 1586 aa10.52□□□□□ -0.73
HLA-DPA3-207ENST00000454398 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
HLA-DPA3-207ENST00000454398 ADGRL1O94910 1474 aa10.5□□□□□ -0.73
HLA-DPA3-207ENST00000454398 EPRSP07814 1512 aaKnown RBP10.5□□□□□ -0.73
HLA-DPA3-207ENST00000454398 UGGT2Q9NYU1 1516 aa10.5□□□□□ -0.73
HLA-DPA3-207ENST00000454398 KDM5BQ9UGL1 1544 aa10.5□□□□□ -0.73
HLA-DPA3-207ENST00000454398 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
HLA-DPA3-207ENST00000454398 UACAQ9BZF9 1416 aa10.5□□□□□ -0.73
HLA-DPA3-207ENST00000454398 PLB1Q6P1J6 1458 aa10.49□□□□□ -0.73
HLA-DPA3-207ENST00000454398 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
HLA-DPA3-207ENST00000454398 WDR7Q9Y4E6 1490 aa10.44□□□□□ -0.74
HLA-DPA3-207ENST00000454398 ARID3CA6NKF2 412 aa10.42□□□□□ -0.74
HLA-DPA3-207ENST00000454398 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
HLA-DPA3-207ENST00000454398 ABCA8O94911 1581 aa10.42□□□□□ -0.74
HLA-DPA3-207ENST00000454398 HECW2Q9P2P5 1572 aa10.42□□□□□ -0.74
HLA-DPA3-207ENST00000454398 KIF21BO75037 1637 aa10.41□□□□□ -0.74
HLA-DPA3-207ENST00000454398 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
HLA-DPA3-207ENST00000454398 PRXQ9BXM0 1461 aa10.4□□□□□ -0.74
HLA-DPA3-207ENST00000454398 CFAP43Q8NDM7 1665 aa10.38□□□□□ -0.75
HLA-DPA3-207ENST00000454398 GOLGA3Q08378 1498 aa10.36□□□□□ -0.75
HLA-DPA3-207ENST00000454398 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
HLA-DPA3-207ENST00000454398 CD109Q6YHK3 1445 aa10.34□□□□□ -0.75
HLA-DPA3-207ENST00000454398 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
HLA-DPA3-207ENST00000454398 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
HLA-DPA3-207ENST00000454398 ATP10BO94823 1461 aa10.33□□□□□ -0.76
HLA-DPA3-207ENST00000454398 SAMD9Q5K651 1589 aa10.32□□□□□ -0.76
HLA-DPA3-207ENST00000454398 FRMPD1Q5SYB0 1578 aa10.31□□□□□ -0.76
HLA-DPA3-207ENST00000454398 RAPGEF6Q8TEU7 1601 aa10.3□□□□□ -0.76
HLA-DPA3-207ENST00000454398 ABCA9Q8IUA7 1624 aa10.29□□□□□ -0.76
HLA-DPA3-207ENST00000454398 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
HLA-DPA3-207ENST00000454398 FHOD3Q2V2M9 1422 aa10.28□□□□□ -0.76
HLA-DPA3-207ENST00000454398 NUP153P49790 1475 aaKnown RBP10.27□□□□□ -0.77
HLA-DPA3-207ENST00000454398 ARAP3Q8WWN8 1544 aa10.27□□□□□ -0.77
HLA-DPA3-207ENST00000454398 SIGLEC1Q9BZZ2 1709 aa10.26□□□□□ -0.77
HLA-DPA3-207ENST00000454398 MADDQ8WXG6 1647 aa10.25□□□□□ -0.77
HLA-DPA3-207ENST00000454398 RAPGEF3O95398 923 aa10.25□□□□□ -0.77
HLA-DPA3-207ENST00000454398 ADAMTSL3P82987 1691 aa10.25□□□□□ -0.77
HLA-DPA3-207ENST00000454398 ARHGEF40Q8TER5 1519 aa10.24□□□□□ -0.77
HLA-DPA3-207ENST00000454398 TTC37Q6PGP7 1564 aa10.24□□□□□ -0.77
HLA-DPA3-207ENST00000454398 RIMS1Q86UR5 1692 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA3-207ENST00000454398 PTPRMP28827 1452 aa10.22□□□□□ -0.77
HLA-DPA3-207ENST00000454398 CDK13Q14004 1512 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA3-207ENST00000454398 BCORL1Q5H9F3 1711 aa10.21□□□□□ -0.77
HLA-DPA3-207ENST00000454398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.77
HLA-DPA3-207ENST00000454398 HNRNPUL2Q1KMD3 747 aaKnown RBP10.21□□□□□ -0.77
HLA-DPA3-207ENST00000454398 FAM9AQ8IZU1 332 aaPredicted RBP10.21□□□□□ -0.77
HLA-DPA3-207ENST00000454398 RICTORQ6R327 1708 aa10.21□□□□□ -0.78
HLA-DPA3-207ENST00000454398 EHMT2Q96KQ7 1210 aa10.2□□□□□ -0.78
HLA-DPA3-207ENST00000454398 NEO1Q92859 1461 aa10.19□□□□□ -0.78
HLA-DPA3-207ENST00000454398 CSRNP3Q8WYN3 585 aa10.19□□□□□ -0.78
HLA-DPA3-207ENST00000454398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.18□□□□□ -0.78
HLA-DPA3-207ENST00000454398 PCF11O94913 1555 aaKnown RBP10.18□□□□□ -0.78
HLA-DPA3-207ENST00000454398 LMTK3Q96Q04 1460 aa10.17□□□□□ -0.78
HLA-DPA3-207ENST00000454398 YEATS2Q9ULM3 1422 aa10.17□□□□□ -0.78
HLA-DPA3-207ENST00000454398 PLPPR3Q6T4P5 718 aa10.17□□□□□ -0.78
HLA-DPA3-207ENST00000454398 FANCAO15360 1455 aa10.17□□□□□ -0.78
HLA-DPA3-207ENST00000454398 ARID4BQ4LE39 1312 aaPredicted RBP10.16□□□□□ -0.78
HLA-DPA3-207ENST00000454398 CFAP74Q9C0B2 1584 aa10.15□□□□□ -0.78
HLA-DPA3-207ENST00000454398 EFCAB5A4FU69 1503 aa10.15□□□□□ -0.78
HLA-DPA3-207ENST00000454398 KIF14Q15058 1648 aa10.15□□□□□ -0.79
HLA-DPA3-207ENST00000454398 ZMYM4Q5VZL5 1548 aa10.14□□□□□ -0.79
HLA-DPA3-207ENST00000454398 ZFYVE16Q7Z3T8 1539 aa10.14□□□□□ -0.79
HLA-DPA3-207ENST00000454398 DENND4BO75064 1496 aaPredicted RBP10.14□□□□□ -0.79
HLA-DPA3-207ENST00000454398 AKNAQ7Z591 1439 aa10.13□□□□□ -0.79
HLA-DPA3-207ENST00000454398 FER1L4A9Z1Z3 1794 aa10.13□□□□□ -0.79
HLA-DPA3-207ENST00000454398 HECW1Q76N89 1606 aa10.12□□□□□ -0.79
HLA-DPA3-207ENST00000454398 LRRIQ1Q96JM4 1722 aa10.12□□□□□ -0.79
HLA-DPA3-207ENST00000454398 EEA1Q15075 1411 aa10.11□□□□□ -0.79
HLA-DPA3-207ENST00000454398 HSPA2P54652 639 aa10.11□□□□□ -0.79
HLA-DPA3-207ENST00000454398 PHLDB1Q86UU1 1377 aa10.11□□□□□ -0.79
HLA-DPA3-207ENST00000454398 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
HLA-DPA3-207ENST00000454398 POGZQ7Z3K3 1410 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms