RNA–Protein interactions for RNA: ENST00000454349.6

TNRC6B-206, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNRC6B, Length 18,279 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-206ENST00000454349 PTMAP06454 111 aaKnown RBP6.85□□□□□ -1.31
TNRC6B-206ENST00000454349 HTATSF1O43719 755 aaKnown RBP6.85□□□□□ -1.31
TNRC6B-206ENST00000454349 KIAA2012Q0VF49 1180 aa6.85□□□□□ -1.31
TNRC6B-206ENST00000454349 CHMP4CQ96CF2 233 aa6.84□□□□□ -1.31
TNRC6B-206ENST00000454349 SCAF1Q9H7N4 1312 aaKnown RBP6.84□□□□□ -1.31
TNRC6B-206ENST00000454349 PHF14O94880 888 aa6.84□□□□□ -1.31
TNRC6B-206ENST00000454349 CSPP1Q1MSJ5 1256 aa6.83□□□□□ -1.32
TNRC6B-206ENST00000454349 HNRNPUL2Q1KMD3 747 aaKnown RBP6.82□□□□□ -1.32
TNRC6B-206ENST00000454349 TONSLQ96HA7 1378 aa6.81□□□□□ -1.32
TNRC6B-206ENST00000454349 PKNOX2Q96KN3 472 aa6.81□□□□□ -1.32
TNRC6B-206ENST00000454349 NAP1L5Q96NT1 182 aaPredicted RBP6.81□□□□□ -1.32
TNRC6B-206ENST00000454349 HMMRO75330 724 aa6.81□□□□□ -1.32
TNRC6B-206ENST00000454349 DHX8Q14562 1220 aaKnown RBP6.8□□□□□ -1.32
TNRC6B-206ENST00000454349 CDCA8Q53HL2 280 aa6.8□□□□□ -1.32
TNRC6B-206ENST00000454349 CHMP4AQ9BY43 222 aa6.79□□□□□ -1.32
TNRC6B-206ENST00000454349 TPM4P67936 248 aa6.79□□□□□ -1.32
TNRC6B-206ENST00000454349 CAGE1Q8TC20 777 aa6.78□□□□□ -1.32
TNRC6B-206ENST00000454349 HMGB3O15347 200 aaKnown RBP6.78□□□□□ -1.32
TNRC6B-206ENST00000454349 CCDC70Q6NSX1 233 aa6.78□□□□□ -1.32
TNRC6B-206ENST00000454349 SLC4A1APQ9BWU0 796 aaKnown RBP6.78□□□□□ -1.32
TNRC6B-206ENST00000454349 FKBP8Q14318 412 aa6.78□□□□□ -1.32
TNRC6B-206ENST00000454349 NOP58Q9Y2X3 529 aaKnown RBP6.78□□□□□ -1.32
TNRC6B-206ENST00000454349 TSPYL1Q9H0U9 437 aa6.78□□□□□ -1.32
TNRC6B-206ENST00000454349 MCCP23508 829 aa6.77□□□□□ -1.33
TNRC6B-206ENST00000454349 EEA1Q15075 1411 aa6.77□□□□□ -1.33
TNRC6B-206ENST00000454349 TEX35Q5T0J7 233 aa6.77□□□□□ -1.33
TNRC6B-206ENST00000454349 CWC15Q9P013 229 aaKnown RBP6.77□□□□□ -1.33
TNRC6B-206ENST00000454349 CCDC66A2RUB6 948 aa6.76□□□□□ -1.33
TNRC6B-206ENST00000454349 GBP4Q96PP9 640 aa6.76□□□□□ -1.33
TNRC6B-206ENST00000454349 TIMELESSQ9UNS1 1208 aa6.76□□□□□ -1.33
TNRC6B-206ENST00000454349 HMGB1P1B2RPK0 211 aaPredicted RBP6.75□□□□□ -1.33
TNRC6B-206ENST00000454349 PES1O00541 588 aaKnown RBP6.75□□□□□ -1.33
TNRC6B-206ENST00000454349 WDR43Q15061 677 aaKnown RBP eCLIP6.75□□□□□ -1.33
TNRC6B-206ENST00000454349 HSP90AA2PQ14568 343 aaPredicted RBP6.75□□□□□ -1.33
TNRC6B-206ENST00000454349 TMC1Q8TDI8 760 aa6.74□□□□□ -1.33
TNRC6B-206ENST00000454349 APPP05067 770 aa6.74□□□□□ -1.33
TNRC6B-206ENST00000454349 CDR1P51861 262 aa6.74□□□□□ -1.33
TNRC6B-206ENST00000454349 USP8P40818 1118 aa6.73□□□□□ -1.33
TNRC6B-206ENST00000454349 FAM50AQ14320 339 aaKnown RBP6.73□□□□□ -1.33
TNRC6B-206ENST00000454349 NBR1Q14596 966 aa6.73□□□□□ -1.33
TNRC6B-206ENST00000454349 SKOR2Q2VWA4 1001 aaPredicted RBP6.73□□□□□ -1.33
TNRC6B-206ENST00000454349 NPM2Q86SE8 214 aaKnown RBP6.73□□□□□ -1.33
TNRC6B-206ENST00000454349 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
TNRC6B-206ENST00000454349 HDAC5Q9UQL6 1122 aa6.72□□□□□ -1.33
TNRC6B-206ENST00000454349 HNRNPUQ00839 825 aaKnown RBP eCLIP6.72□□□□□ -1.33
TNRC6B-206ENST00000454349 STK11IPQ8N1F8 1099 aa6.72□□□□□ -1.33
TNRC6B-206ENST00000454349 KIF3AQ9Y496 699 aa6.72□□□□□ -1.33
TNRC6B-206ENST00000454349 DCTN1Q14203 1278 aa6.71□□□□□ -1.34
TNRC6B-206ENST00000454349 PHLDB1Q86UU1 1377 aa6.71□□□□□ -1.34
TNRC6B-206ENST00000454349 ACBD3Q9H3P7 528 aa6.71□□□□□ -1.34
TNRC6B-206ENST00000454349 MYO15BQ96JP2 1530 aa6.71□□□□□ -1.34
TNRC6B-206ENST00000454349 NEXNQ0ZGT2 675 aa6.71□□□□□ -1.34
TNRC6B-206ENST00000454349 CAVIN1Q6NZI2 390 aaKnown RBP6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 BCL11AQ9H165 835 aa6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 HSCBQ8IWL3 235 aa6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 CALD1Q05682 793 aaKnown RBP6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 ISY1Q9ULR0 285 aaKnown RBP6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 ITGAEP38570 1179 aa6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 TRIM52Q96A61 297 aa6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 NEFHP12036 1026 aa6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 NOC3LQ8WTT2 800 aaKnown RBP6.7□□□□□ -1.34
TNRC6B-206ENST00000454349 PPP4R2Q9NY27 417 aa6.69□□□□□ -1.34
TNRC6B-206ENST00000454349 HSP90B1P14625 803 aaKnown RBP6.69□□□□□ -1.34
TNRC6B-206ENST00000454349 DDX11L8A8MPP1 907 aa6.69□□□□□ -1.34
TNRC6B-206ENST00000454349 KIF16BQ96L93 1317 aa6.68□□□□□ -1.34
TNRC6B-206ENST00000454349 TPM3P06753 285 aa6.68□□□□□ -1.34
TNRC6B-206ENST00000454349 ARGLU1Q9NWB6 273 aaPredicted RBP6.68□□□□□ -1.34
TNRC6B-206ENST00000454349 CFAP53Q96M91 514 aa6.67□□□□□ -1.34
TNRC6B-206ENST00000454349 CCDC191Q8NCU4 936 aa6.67□□□□□ -1.34
TNRC6B-206ENST00000454349 AAMPQ13685 434 aa6.67□□□□□ -1.34
TNRC6B-206ENST00000454349 EIF4G2P78344 907 aaKnown RBP eCLIP6.67□□□□□ -1.34
TNRC6B-206ENST00000454349 IL27Q8NEV9 243 aa6.66□□□□□ -1.34
TNRC6B-206ENST00000454349 INCENPQ9NQS7 918 aa6.66□□□□□ -1.34
TNRC6B-206ENST00000454349 RRP12Q5JTH9 1297 aaKnown RBP6.66□□□□□ -1.34
TNRC6B-206ENST00000454349 ERCC4Q92889 916 aaPredicted RBP6.66□□□□□ -1.34
TNRC6B-206ENST00000454349 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.66□□□□□ -1.34
TNRC6B-206ENST00000454349 MIER1Q8N108 512 aa6.66□□□□□ -1.34
TNRC6B-206ENST00000454349 BCANQ96GW7 911 aa6.65□□□□□ -1.34
TNRC6B-206ENST00000454349 RSF1Q96T23 1441 aaPredicted RBP6.65□□□□□ -1.34
TNRC6B-206ENST00000454349 GOLGA6L7A0A1B0GV03 622 aa6.65□□□□□ -1.35
TNRC6B-206ENST00000454349 PDIA4P13667 645 aaKnown RBP6.65□□□□□ -1.35
TNRC6B-206ENST00000454349 ZRSR2Q15696 482 aaKnown RBP6.65□□□□□ -1.35
TNRC6B-206ENST00000454349 WWC1Q8IX03 1113 aa6.65□□□□□ -1.35
TNRC6B-206ENST00000454349 MYO6Q9UM54 1294 aa6.65□□□□□ -1.35
TNRC6B-206ENST00000454349 TPM1P09493 284 aa6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 RDXP35241 583 aaKnown RBP6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 CSRNP3Q8WYN3 585 aa6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 TCERG1O14776 1098 aaKnown RBP6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 HMGN5P82970 282 aaKnown RBP6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 HSP90AB1P08238 724 aaKnown RBP6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 AK7Q96M32 723 aa6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 CCER2I3L3R5 266 aa6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 CCP110O43303 1012 aa6.64□□□□□ -1.35
TNRC6B-206ENST00000454349 FTSJ3Q8IY81 847 aaKnown RBP6.63□□□□□ -1.35
TNRC6B-206ENST00000454349 NGEFQ8N5V2 710 aa6.63□□□□□ -1.35
TNRC6B-206ENST00000454349 POLR3GO15318 223 aaPredicted RBP6.62□□□□□ -1.35
TNRC6B-206ENST00000454349 CEP162Q5TB80 1403 aa6.62□□□□□ -1.35
TNRC6B-206ENST00000454349 FAM107BQ9H098 131 aa6.62□□□□□ -1.35
TNRC6B-206ENST00000454349 TXLNBQ8N3L3 684 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms