RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
GARNL3-210ENST00000453030 KIF27Q86VH2 1401 aa20.54■□□□□ 0.88
GARNL3-210ENST00000453030 ADCY10Q96PN6 1610 aa20.51■□□□□ 0.87
GARNL3-210ENST00000453030 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
GARNL3-210ENST00000453030 IGF1RP08069 1367 aa20.48■□□□□ 0.87
GARNL3-210ENST00000453030 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
GARNL3-210ENST00000453030 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
GARNL3-210ENST00000453030 DIP2BQ9P265 1576 aa20.43■□□□□ 0.86
GARNL3-210ENST00000453030 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
GARNL3-210ENST00000453030 TSPOAP1O95153 1857 aa20.39■□□□□ 0.85
GARNL3-210ENST00000453030 CARMIL1Q5VZK9 1371 aa20.38■□□□□ 0.85
GARNL3-210ENST00000453030 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
GARNL3-210ENST00000453030 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
GARNL3-210ENST00000453030 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
GARNL3-210ENST00000453030 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
GARNL3-210ENST00000453030 PTPRGP23470 1445 aa20.29■□□□□ 0.84
GARNL3-210ENST00000453030 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
GARNL3-210ENST00000453030 KDM6BO15054 1643 aa20.28■□□□□ 0.84
GARNL3-210ENST00000453030 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
GARNL3-210ENST00000453030 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
GARNL3-210ENST00000453030 DISP1Q96F81 1524 aa20.22■□□□□ 0.83
GARNL3-210ENST00000453030 RAPGEF2Q9Y4G8 1499 aa20.22■□□□□ 0.83
GARNL3-210ENST00000453030 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
GARNL3-210ENST00000453030 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
GARNL3-210ENST00000453030 UGGT2Q9NYU1 1516 aa20.18■□□□□ 0.82
GARNL3-210ENST00000453030 PPRC1Q5VV67 1664 aaKnown RBP20.18■□□□□ 0.82
GARNL3-210ENST00000453030 ASXL2Q76L83 1435 aa20.18■□□□□ 0.82
GARNL3-210ENST00000453030 UHRF1BP1LA0JNW5 1464 aa20.17■□□□□ 0.82
GARNL3-210ENST00000453030 UACAQ9BZF9 1416 aa20.15■□□□□ 0.82
GARNL3-210ENST00000453030 ZCCHC11Q5TAX3 1644 aaKnown RBP20.15■□□□□ 0.82
GARNL3-210ENST00000453030 PLB1Q6P1J6 1458 aa20.14■□□□□ 0.81
GARNL3-210ENST00000453030 GLI2P10070 1586 aa20.13■□□□□ 0.81
GARNL3-210ENST00000453030 KDM5BQ9UGL1 1544 aa20.09■□□□□ 0.81
GARNL3-210ENST00000453030 MAP3K4Q9Y6R4 1608 aa20.08■□□□□ 0.8
GARNL3-210ENST00000453030 EPRSP07814 1512 aaKnown RBP20.06■□□□□ 0.8
GARNL3-210ENST00000453030 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
GARNL3-210ENST00000453030 WDR7Q9Y4E6 1490 aa19.99■□□□□ 0.79
GARNL3-210ENST00000453030 KDM4FA0A1W2PPD8 638 aa19.98■□□□□ 0.79
GARNL3-210ENST00000453030 PRXQ9BXM0 1461 aa19.98■□□□□ 0.79
GARNL3-210ENST00000453030 ABCA8O94911 1581 aa19.97■□□□□ 0.79
GARNL3-210ENST00000453030 TEX14Q8IWB6 1497 aa19.97■□□□□ 0.79
GARNL3-210ENST00000453030 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
GARNL3-210ENST00000453030 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
GARNL3-210ENST00000453030 ADGRL1O94910 1474 aa19.9■□□□□ 0.78
GARNL3-210ENST00000453030 SAMD9Q5K651 1589 aa19.83■□□□□ 0.77
GARNL3-210ENST00000453030 CD109Q6YHK3 1445 aa19.83■□□□□ 0.76
GARNL3-210ENST00000453030 MAGI3Q5TCQ9 1506 aa19.82■□□□□ 0.76
GARNL3-210ENST00000453030 KCNH8Q96L42 1107 aa19.82■□□□□ 0.76
GARNL3-210ENST00000453030 ARID3CA6NKF2 412 aa19.81■□□□□ 0.76
GARNL3-210ENST00000453030 P3H3Q8IVL6 736 aa19.81■□□□□ 0.76
GARNL3-210ENST00000453030 RAPGEF6Q8TEU7 1601 aa19.79■□□□□ 0.76
GARNL3-210ENST00000453030 KIF21BO75037 1637 aa19.76■□□□□ 0.75
GARNL3-210ENST00000453030 ATP10BO94823 1461 aa19.75■□□□□ 0.75
GARNL3-210ENST00000453030 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
GARNL3-210ENST00000453030 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
GARNL3-210ENST00000453030 FAM9AQ8IZU1 332 aaPredicted RBP19.72■□□□□ 0.75
GARNL3-210ENST00000453030 EEA1Q15075 1411 aa19.7■□□□□ 0.74
GARNL3-210ENST00000453030 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
GARNL3-210ENST00000453030 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
GARNL3-210ENST00000453030 HECW2Q9P2P5 1572 aa19.68■□□□□ 0.74
GARNL3-210ENST00000453030 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
GARNL3-210ENST00000453030 ARAP3Q8WWN8 1544 aa19.66■□□□□ 0.74
GARNL3-210ENST00000453030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
GARNL3-210ENST00000453030 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
GARNL3-210ENST00000453030 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
GARNL3-210ENST00000453030 FRMPD1Q5SYB0 1578 aa19.6■□□□□ 0.73
GARNL3-210ENST00000453030 NEO1Q92859 1461 aa19.59■□□□□ 0.73
GARNL3-210ENST00000453030 PHLDB1Q86UU1 1377 aa19.55■□□□□ 0.72
GARNL3-210ENST00000453030 TTC37Q6PGP7 1564 aa19.54■□□□□ 0.72
GARNL3-210ENST00000453030 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
GARNL3-210ENST00000453030 RICTORQ6R327 1708 aa19.54■□□□□ 0.72
GARNL3-210ENST00000453030 CFAP74Q9C0B2 1584 aa19.53■□□□□ 0.72
GARNL3-210ENST00000453030 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
GARNL3-210ENST00000453030 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
GARNL3-210ENST00000453030 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
GARNL3-210ENST00000453030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.51■□□□□ 0.71
GARNL3-210ENST00000453030 ARHGEF40Q8TER5 1519 aa19.51■□□□□ 0.71
GARNL3-210ENST00000453030 EHMT2Q96KQ7 1210 aa19.5■□□□□ 0.71
GARNL3-210ENST00000453030 MADDQ8WXG6 1647 aa19.48■□□□□ 0.71
GARNL3-210ENST00000453030 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
GARNL3-210ENST00000453030 FANCAO15360 1455 aa19.47■□□□□ 0.71
GARNL3-210ENST00000453030 PTPRMP28827 1452 aa19.46■□□□□ 0.71
GARNL3-210ENST00000453030 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
GARNL3-210ENST00000453030 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
GARNL3-210ENST00000453030 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
GARNL3-210ENST00000453030 AKNAQ7Z591 1439 aa19.44■□□□□ 0.7
GARNL3-210ENST00000453030 RIMS1Q86UR5 1692 aaKnown RBP19.43■□□□□ 0.7
GARNL3-210ENST00000453030 ARID4BQ4LE39 1312 aaPredicted RBP19.42■□□□□ 0.7
GARNL3-210ENST00000453030 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
GARNL3-210ENST00000453030 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
GARNL3-210ENST00000453030 UBTFP17480 764 aaKnown RBP19.41■□□□□ 0.7
GARNL3-210ENST00000453030 SIGLEC1Q9BZZ2 1709 aa19.41■□□□□ 0.7
GARNL3-210ENST00000453030 ARHGAP35Q9NRY4 1499 aa19.4■□□□□ 0.7
GARNL3-210ENST00000453030 LRRIQ1Q96JM4 1722 aa19.39■□□□□ 0.7
GARNL3-210ENST00000453030 ZFYVE16Q7Z3T8 1539 aa19.39■□□□□ 0.69
GARNL3-210ENST00000453030 FMN1Q68DA7 1419 aa19.38■□□□□ 0.69
GARNL3-210ENST00000453030 KIF14Q15058 1648 aa19.37■□□□□ 0.69
GARNL3-210ENST00000453030 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
GARNL3-210ENST00000453030 YEATS2Q9ULM3 1422 aa19.34■□□□□ 0.69
GARNL3-210ENST00000453030 PCF11O94913 1555 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms