RNA–Protein interactions for RNA: ENST00000452354.5

LINC01104-202, Transcript of long intergenic non-protein coding RNA 1104, humanhuman

TSL 1 (best) BASIC

Gene LINC01104, Length 3,115 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01104-202ENST00000452354 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
LINC01104-202ENST00000452354 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC01104-202ENST00000452354 CUL7Q14999 1698 aa15.41■□□□□ 0.06
LINC01104-202ENST00000452354 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
LINC01104-202ENST00000452354 ITGAEP38570 1179 aa15.41■□□□□ 0.06
LINC01104-202ENST00000452354 MRC2Q9UBG0 1479 aa15.41■□□□□ 0.06
LINC01104-202ENST00000452354 ACIN1Q9UKV3 1341 aaKnown RBP15.39■□□□□ 0.05
LINC01104-202ENST00000452354 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
LINC01104-202ENST00000452354 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
LINC01104-202ENST00000452354 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
LINC01104-202ENST00000452354 ERCC6Q03468 1493 aa15.34■□□□□ 0.05
LINC01104-202ENST00000452354 CCNB3Q8WWL7 1395 aa15.33■□□□□ 0.05
LINC01104-202ENST00000452354 TIAM1Q13009 1591 aa15.33■□□□□ 0.04
LINC01104-202ENST00000452354 RRBP1Q9P2E9 1410 aaKnown RBP15.32■□□□□ 0.04
LINC01104-202ENST00000452354 ZNF608Q9ULD9 1512 aaPredicted RBP15.32■□□□□ 0.04
LINC01104-202ENST00000452354 PCF11O94913 1555 aaKnown RBP15.32■□□□□ 0.04
LINC01104-202ENST00000452354 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
LINC01104-202ENST00000452354 CTTNBP2Q8WZ74 1663 aa15.3■□□□□ 0.04
LINC01104-202ENST00000452354 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
LINC01104-202ENST00000452354 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
LINC01104-202ENST00000452354 FAM50AQ14320 339 aaKnown RBP15.28■□□□□ 0.04
LINC01104-202ENST00000452354 MAP3K1Q13233 1512 aa15.27■□□□□ 0.03
LINC01104-202ENST00000452354 FMN1Q68DA7 1419 aa15.27■□□□□ 0.03
LINC01104-202ENST00000452354 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.03
LINC01104-202ENST00000452354 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
LINC01104-202ENST00000452354 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
LINC01104-202ENST00000452354 WDR62O43379 1518 aa15.26■□□□□ 0.03
LINC01104-202ENST00000452354 FYCO1Q9BQS8 1478 aa15.25■□□□□ 0.03
LINC01104-202ENST00000452354 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
LINC01104-202ENST00000452354 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
LINC01104-202ENST00000452354 ARID3CA6NKF2 412 aa15.21■□□□□ 0.03
LINC01104-202ENST00000452354 FBLN2P98095 1184 aa15.21■□□□□ 0.03
LINC01104-202ENST00000452354 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
LINC01104-202ENST00000452354 ADAMTS12P58397 1594 aa15.2■□□□□ 0.02
LINC01104-202ENST00000452354 DHX57Q6P158 1386 aaKnown RBP15.2■□□□□ 0.02
LINC01104-202ENST00000452354 SAMD9Q5K651 1589 aa15.2■□□□□ 0.02
LINC01104-202ENST00000452354 CENPBP07199 599 aaPredicted RBP15.19■□□□□ 0.02
LINC01104-202ENST00000452354 MTUS2Q5JR59 1369 aa15.19■□□□□ 0.02
LINC01104-202ENST00000452354 MYT1Q01538 1121 aa15.19■□□□□ 0.02
LINC01104-202ENST00000452354 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
LINC01104-202ENST00000452354 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
LINC01104-202ENST00000452354 IQGAP2Q13576 1575 aa15.16■□□□□ 0.02
LINC01104-202ENST00000452354 RAB3GAP2Q9H2M9 1393 aa15.14■□□□□ 0.01
LINC01104-202ENST00000452354 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
LINC01104-202ENST00000452354 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
LINC01104-202ENST00000452354 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
LINC01104-202ENST00000452354 GRIN2AQ12879 1464 aa15.1■□□□□ 0.01
LINC01104-202ENST00000452354 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
LINC01104-202ENST00000452354 KIAA0586Q9BVV6 1533 aa15.08■□□□□ 0
LINC01104-202ENST00000452354 SETD5Q9C0A6 1442 aa15.08■□□□□ 0
LINC01104-202ENST00000452354 FGD6Q6ZV73 1430 aa15.08■□□□□ 0
LINC01104-202ENST00000452354 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0
LINC01104-202ENST00000452354 NCOA2Q15596 1464 aa15.07■□□□□ 0
LINC01104-202ENST00000452354 UGGT2Q9NYU1 1516 aa15.05■□□□□ -0
LINC01104-202ENST00000452354 CDK13Q14004 1512 aaKnown RBP15.04■□□□□ -0
LINC01104-202ENST00000452354 MAGI3Q5TCQ9 1506 aa15.04■□□□□ -0
LINC01104-202ENST00000452354 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
LINC01104-202ENST00000452354 DISP1Q96F81 1524 aa15.03■□□□□ -0
LINC01104-202ENST00000452354 SYNJ2O15056 1496 aa15.03■□□□□ -0
LINC01104-202ENST00000452354 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
LINC01104-202ENST00000452354 MYOM3Q5VTT5 1437 aa15.01□□□□□ -0.01
LINC01104-202ENST00000452354 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
LINC01104-202ENST00000452354 JPH4Q96JJ6 628 aa15.01□□□□□ -0.01
LINC01104-202ENST00000452354 HECW1Q76N89 1606 aa15□□□□□ -0.01
LINC01104-202ENST00000452354 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
LINC01104-202ENST00000452354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15□□□□□ -0.01
LINC01104-202ENST00000452354 PTPRKQ15262 1439 aa15□□□□□ -0.01
LINC01104-202ENST00000452354 CEP170Q5SW79 1584 aa14.99□□□□□ -0.01
LINC01104-202ENST00000452354 CHIC2Q9UKJ5 165 aa14.99□□□□□ -0.01
LINC01104-202ENST00000452354 KIAA0556O60303 1618 aa14.99□□□□□ -0.01
LINC01104-202ENST00000452354 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
LINC01104-202ENST00000452354 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
LINC01104-202ENST00000452354 MAPKBP1O60336 1514 aa14.96□□□□□ -0.01
LINC01104-202ENST00000452354 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
LINC01104-202ENST00000452354 NUP153P49790 1475 aaKnown RBP14.94□□□□□ -0.02
LINC01104-202ENST00000452354 PLB1Q6P1J6 1458 aa14.93□□□□□ -0.02
LINC01104-202ENST00000452354 NUP160Q12769 1436 aa14.93□□□□□ -0.02
LINC01104-202ENST00000452354 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
LINC01104-202ENST00000452354 CDK11AQ9UQ88 783 aaPredicted RBP14.92□□□□□ -0.02
LINC01104-202ENST00000452354 CARMIL2Q6F5E8 1435 aa14.91□□□□□ -0.02
LINC01104-202ENST00000452354 PTPN23Q9H3S7 1636 aa14.9□□□□□ -0.02
LINC01104-202ENST00000452354 MIER1Q8N108 512 aa14.9□□□□□ -0.02
LINC01104-202ENST00000452354 HFM1A2PYH4 1435 aa14.89□□□□□ -0.03
LINC01104-202ENST00000452354 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
LINC01104-202ENST00000452354 NAIPQ13075 1403 aa14.88□□□□□ -0.03
LINC01104-202ENST00000452354 PRG4Q92954 1404 aaPredicted RBP14.88□□□□□ -0.03
LINC01104-202ENST00000452354 RAPGEF6Q8TEU7 1601 aa14.88□□□□□ -0.03
LINC01104-202ENST00000452354 MIA2Q96PC5 1412 aa14.84□□□□□ -0.03
LINC01104-202ENST00000452354 TRIM52Q96A61 297 aa14.84□□□□□ -0.03
LINC01104-202ENST00000452354 ZNF777Q9ULD5 760 aaPredicted RBP14.84□□□□□ -0.03
LINC01104-202ENST00000452354 TCOF1Q13428 1488 aaKnown RBP14.83□□□□□ -0.03
LINC01104-202ENST00000452354 CFDP1Q9UEE9 299 aaPredicted RBP14.82□□□□□ -0.04
LINC01104-202ENST00000452354 UACAQ9BZF9 1416 aa14.82□□□□□ -0.04
LINC01104-202ENST00000452354 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
LINC01104-202ENST00000452354 PLEKHD1A6NEE1 506 aa14.8□□□□□ -0.04
LINC01104-202ENST00000452354 PTPRGP23470 1445 aa14.78□□□□□ -0.04
LINC01104-202ENST00000452354 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
LINC01104-202ENST00000452354 DAPK1P53355 1430 aa14.76□□□□□ -0.05
LINC01104-202ENST00000452354 PPP1R15AO75807 674 aaPredicted RBP14.76□□□□□ -0.05
LINC01104-202ENST00000452354 ABCC5O15440 1437 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms