RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
SCAMP4-205ENST00000452128 KIAA0586Q9BVV6 1533 aa27.42■■□□□ 1.98
SCAMP4-205ENST00000452128 PRG4Q92954 1404 aaPredicted RBP27.36■■□□□ 1.97
SCAMP4-205ENST00000452128 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
SCAMP4-205ENST00000452128 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
SCAMP4-205ENST00000452128 PRXQ9BXM0 1461 aa27.29■■□□□ 1.96
SCAMP4-205ENST00000452128 CSRNP3Q8WYN3 585 aa27.21■■□□□ 1.95
SCAMP4-205ENST00000452128 EEA1Q15075 1411 aa27.14■■□□□ 1.93
SCAMP4-205ENST00000452128 IQGAP2Q13576 1575 aa27.13■■□□□ 1.93
SCAMP4-205ENST00000452128 DISP1Q96F81 1524 aa27.09■■□□□ 1.93
SCAMP4-205ENST00000452128 UGGT2Q9NYU1 1516 aa27.08■■□□□ 1.93
SCAMP4-205ENST00000452128 TNIKQ9UKE5 1360 aa27.04■■□□□ 1.92
SCAMP4-205ENST00000452128 CARMIL2Q6F5E8 1435 aa27.04■■□□□ 1.92
SCAMP4-205ENST00000452128 PTPRGP23470 1445 aa27.03■■□□□ 1.92
SCAMP4-205ENST00000452128 TRHP20396 242 aaPredicted RBP26.97■■□□□ 1.91
SCAMP4-205ENST00000452128 FAM9AQ8IZU1 332 aaPredicted RBP26.97■■□□□ 1.91
SCAMP4-205ENST00000452128 ADCY10Q96PN6 1610 aa26.94■■□□□ 1.9
SCAMP4-205ENST00000452128 CTTNBP2Q8WZ74 1663 aa26.9■■□□□ 1.9
SCAMP4-205ENST00000452128 KIAA0556O60303 1618 aa26.89■■□□□ 1.9
SCAMP4-205ENST00000452128 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
SCAMP4-205ENST00000452128 UACAQ9BZF9 1416 aa26.84■■□□□ 1.89
SCAMP4-205ENST00000452128 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
SCAMP4-205ENST00000452128 KIF21BO75037 1637 aa26.83■■□□□ 1.88
SCAMP4-205ENST00000452128 NPM1P06748 294 aaKnown RBP eCLIP26.82■■□□□ 1.88
SCAMP4-205ENST00000452128 TTBK1Q5TCY1 1321 aaPredicted RBP26.82■■□□□ 1.88
SCAMP4-205ENST00000452128 MAPKBP1O60336 1514 aa26.81■■□□□ 1.88
SCAMP4-205ENST00000452128 ABCC2Q92887 1545 aa26.8■■□□□ 1.88
SCAMP4-205ENST00000452128 ABCC10Q5T3U5 1492 aa26.74■■□□□ 1.87
SCAMP4-205ENST00000452128 KDM5BQ9UGL1 1544 aa26.73■■□□□ 1.87
SCAMP4-205ENST00000452128 PLB1Q6P1J6 1458 aa26.71■■□□□ 1.87
SCAMP4-205ENST00000452128 SAMD9Q5K651 1589 aa26.7■■□□□ 1.86
SCAMP4-205ENST00000452128 P3H3Q8IVL6 736 aa26.69■■□□□ 1.86
SCAMP4-205ENST00000452128 ABCA8O94911 1581 aa26.68■■□□□ 1.86
SCAMP4-205ENST00000452128 FAM69CQ0P6D2 419 aa26.67■■□□□ 1.86
SCAMP4-205ENST00000452128 KIF13AQ9H1H9 1805 aa26.64■■□□□ 1.85
SCAMP4-205ENST00000452128 ASXL2Q76L83 1435 aa26.64■■□□□ 1.85
SCAMP4-205ENST00000452128 DIP2BQ9P265 1576 aa26.62■■□□□ 1.85
SCAMP4-205ENST00000452128 UBTFP17480 764 aaKnown RBP26.59■■□□□ 1.85
SCAMP4-205ENST00000452128 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
SCAMP4-205ENST00000452128 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
SCAMP4-205ENST00000452128 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
SCAMP4-205ENST00000452128 ZCCHC11Q5TAX3 1644 aaKnown RBP26.54■■□□□ 1.84
SCAMP4-205ENST00000452128 EFCAB5A4FU69 1503 aa26.51■■□□□ 1.83
SCAMP4-205ENST00000452128 ATP10BO94823 1461 aa26.51■■□□□ 1.83
SCAMP4-205ENST00000452128 GLI2P10070 1586 aa26.5■■□□□ 1.83
SCAMP4-205ENST00000452128 EPRSP07814 1512 aaKnown RBP26.49■■□□□ 1.83
SCAMP4-205ENST00000452128 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
SCAMP4-205ENST00000452128 WDR7Q9Y4E6 1490 aa26.45■■□□□ 1.82
SCAMP4-205ENST00000452128 NUP153P49790 1475 aaKnown RBP26.43■■□□□ 1.82
SCAMP4-205ENST00000452128 RAPGEF6Q8TEU7 1601 aa26.41■■□□□ 1.82
SCAMP4-205ENST00000452128 ARID3CA6NKF2 412 aa26.38■■□□□ 1.81
SCAMP4-205ENST00000452128 KCNH8Q96L42 1107 aa26.33■■□□□ 1.81
SCAMP4-205ENST00000452128 PPRC1Q5VV67 1664 aaKnown RBP26.33■■□□□ 1.81
SCAMP4-205ENST00000452128 MAP3K4Q9Y6R4 1608 aa26.32■■□□□ 1.8
SCAMP4-205ENST00000452128 FMN1Q68DA7 1419 aa26.3■■□□□ 1.8
SCAMP4-205ENST00000452128 TSPOAP1O95153 1857 aa26.26■■□□□ 1.79
SCAMP4-205ENST00000452128 CD109Q6YHK3 1445 aa26.24■■□□□ 1.79
SCAMP4-205ENST00000452128 MAGI3Q5TCQ9 1506 aa26.24■■□□□ 1.79
SCAMP4-205ENST00000452128 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
SCAMP4-205ENST00000452128 PLEKHD1A6NEE1 506 aa26.2■■□□□ 1.78
SCAMP4-205ENST00000452128 CLIP1P30622 1438 aa26.2■■□□□ 1.78
SCAMP4-205ENST00000452128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.19■■□□□ 1.78
SCAMP4-205ENST00000452128 HNRNPUL2Q1KMD3 747 aaKnown RBP26.19■■□□□ 1.78
SCAMP4-205ENST00000452128 TEX14Q8IWB6 1497 aa26.17■■□□□ 1.78
SCAMP4-205ENST00000452128 CFAP43Q8NDM7 1665 aa26.16■■□□□ 1.78
SCAMP4-205ENST00000452128 CDK13Q14004 1512 aaKnown RBP26.16■■□□□ 1.78
SCAMP4-205ENST00000452128 ABCA9Q8IUA7 1624 aa26.15■■□□□ 1.78
SCAMP4-205ENST00000452128 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
SCAMP4-205ENST00000452128 KDM6BO15054 1643 aa26.14■■□□□ 1.78
SCAMP4-205ENST00000452128 CASKIN1Q8WXD9 1431 aa26.14■■□□□ 1.77
SCAMP4-205ENST00000452128 HECW1Q76N89 1606 aa26.1■■□□□ 1.77
SCAMP4-205ENST00000452128 ATP1B4Q9UN42 357 aaPredicted RBP26.07■■□□□ 1.76
SCAMP4-205ENST00000452128 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
SCAMP4-205ENST00000452128 PHLDB1Q86UU1 1377 aa26.04■■□□□ 1.76
SCAMP4-205ENST00000452128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.766e-6■■■■■ 38.2
SCAMP4-205ENST00000452128 ARAP3Q8WWN8 1544 aa26.03■■□□□ 1.76
SCAMP4-205ENST00000452128 CDK11AQ9UQ88 783 aaPredicted RBP26.02■■□□□ 1.76
SCAMP4-205ENST00000452128 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
SCAMP4-205ENST00000452128 LRRIQ1Q96JM4 1722 aa26.01■■□□□ 1.75
SCAMP4-205ENST00000452128 FYCO1Q9BQS8 1478 aa26■■□□□ 1.75
SCAMP4-205ENST00000452128 TROQ12816 1431 aaPredicted RBP26■■□□□ 1.75
SCAMP4-205ENST00000452128 NEO1Q92859 1461 aa25.98■■□□□ 1.75
SCAMP4-205ENST00000452128 CCDC18Q5T9S5 1454 aa25.96■■□□□ 1.75
SCAMP4-205ENST00000452128 TTC37Q6PGP7 1564 aa25.95■■□□□ 1.75
SCAMP4-205ENST00000452128 PLCH2O75038 1416 aa25.94■■□□□ 1.74
SCAMP4-205ENST00000452128 AKNAQ7Z591 1439 aa25.88■■□□□ 1.73
SCAMP4-205ENST00000452128 RAPGEF3O95398 923 aa25.88■■□□□ 1.73
SCAMP4-205ENST00000452128 KIF14Q15058 1648 aa25.88■■□□□ 1.73
SCAMP4-205ENST00000452128 FANCAO15360 1455 aa25.87■■□□□ 1.73
SCAMP4-205ENST00000452128 KDM4FA0A1W2PPD8 638 aa25.85■■□□□ 1.73
SCAMP4-205ENST00000452128 EFCAB2Q5VUJ9 269 aa25.81■■□□□ 1.72
SCAMP4-205ENST00000452128 FRMPD1Q5SYB0 1578 aa25.8■■□□□ 1.72
SCAMP4-205ENST00000452128 DENND4BO75064 1496 aaPredicted RBP25.79■■□□□ 1.72
SCAMP4-205ENST00000452128 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.71
SCAMP4-205ENST00000452128 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
SCAMP4-205ENST00000452128 CFAP74Q9C0B2 1584 aa25.73■■□□□ 1.71
SCAMP4-205ENST00000452128 SCAPERQ9BY12 1400 aa25.73■■□□□ 1.71
SCAMP4-205ENST00000452128 ADGRL1O94910 1474 aa25.71■■□□□ 1.71
SCAMP4-205ENST00000452128 MYO5CQ9NQX4 1742 aa25.71■■□□□ 1.71
SCAMP4-205ENST00000452128 GPATCH8Q9UKJ3 1502 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms