RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 ABCC10Q5T3U5 1492 aa11.91□□□□□ -0.5
PMS1-217ENST00000450931 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
PMS1-217ENST00000450931 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
PMS1-217ENST00000450931 ADCY10Q96PN6 1610 aa11.87□□□□□ -0.51
PMS1-217ENST00000450931 CUL7Q14999 1698 aa11.86□□□□□ -0.51
PMS1-217ENST00000450931 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
PMS1-217ENST00000450931 KDM6BO15054 1643 aa11.83□□□□□ -0.51
PMS1-217ENST00000450931 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
PMS1-217ENST00000450931 FAM69CQ0P6D2 419 aa11.81□□□□□ -0.52
PMS1-217ENST00000450931 SUPT5HO00267 1087 aaKnown RBP11.8□□□□□ -0.52
PMS1-217ENST00000450931 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
PMS1-217ENST00000450931 GLI2P10070 1586 aa11.76□□□□□ -0.53
PMS1-217ENST00000450931 IGF1RP08069 1367 aa11.74□□□□□ -0.53
PMS1-217ENST00000450931 ABCC2Q92887 1545 aa11.74□□□□□ -0.53
PMS1-217ENST00000450931 UHRF1BP1LA0JNW5 1464 aa11.73□□□□□ -0.53
PMS1-217ENST00000450931 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
PMS1-217ENST00000450931 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
PMS1-217ENST00000450931 PLB1Q6P1J6 1458 aa11.72□□□□□ -0.53
PMS1-217ENST00000450931 PTPRGP23470 1445 aa11.71□□□□□ -0.53
PMS1-217ENST00000450931 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.53
PMS1-217ENST00000450931 IQGAP2Q13576 1575 aa11.71□□□□□ -0.53
PMS1-217ENST00000450931 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
PMS1-217ENST00000450931 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
PMS1-217ENST00000450931 ASXL2Q76L83 1435 aa11.67□□□□□ -0.54
PMS1-217ENST00000450931 MAP3K4Q9Y6R4 1608 aa11.67□□□□□ -0.54
PMS1-217ENST00000450931 CARMIL1Q5VZK9 1371 aa11.66□□□□□ -0.54
PMS1-217ENST00000450931 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
PMS1-217ENST00000450931 UACAQ9BZF9 1416 aa11.65□□□□□ -0.54
PMS1-217ENST00000450931 TEX14Q8IWB6 1497 aa11.65□□□□□ -0.54
PMS1-217ENST00000450931 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
PMS1-217ENST00000450931 DISP1Q96F81 1524 aa11.64□□□□□ -0.55
PMS1-217ENST00000450931 ADGRL1O94910 1474 aa11.63□□□□□ -0.55
PMS1-217ENST00000450931 EPRSP07814 1512 aaKnown RBP11.63□□□□□ -0.55
PMS1-217ENST00000450931 ZCCHC11Q5TAX3 1644 aaKnown RBP11.62□□□□□ -0.55
PMS1-217ENST00000450931 KIAA0556O60303 1618 aa11.61□□□□□ -0.55
PMS1-217ENST00000450931 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
PMS1-217ENST00000450931 CFAP43Q8NDM7 1665 aa11.57□□□□□ -0.56
PMS1-217ENST00000450931 WDR7Q9Y4E6 1490 aa11.56□□□□□ -0.56
PMS1-217ENST00000450931 CTTNBP2Q8WZ74 1663 aa11.56□□□□□ -0.56
PMS1-217ENST00000450931 COL17A1Q9UMD9 1497 aaPredicted RBP11.56□□□□□ -0.56
PMS1-217ENST00000450931 MAGI3Q5TCQ9 1506 aa11.55□□□□□ -0.56
PMS1-217ENST00000450931 HECW2Q9P2P5 1572 aa11.55□□□□□ -0.56
PMS1-217ENST00000450931 GOLGA3Q08378 1498 aa11.53□□□□□ -0.56
PMS1-217ENST00000450931 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.56
PMS1-217ENST00000450931 ABCA8O94911 1581 aa11.52□□□□□ -0.57
PMS1-217ENST00000450931 TTBK1Q5TCY1 1321 aaPredicted RBP11.51□□□□□ -0.57
PMS1-217ENST00000450931 CD109Q6YHK3 1445 aa11.47□□□□□ -0.57
PMS1-217ENST00000450931 ARAP3Q8WWN8 1544 aa11.46□□□□□ -0.57
PMS1-217ENST00000450931 PHLDB1Q86UU1 1377 aa11.44□□□□□ -0.58
PMS1-217ENST00000450931 KIF21BO75037 1637 aa11.44□□□□□ -0.58
PMS1-217ENST00000450931 ABCA9Q8IUA7 1624 aa11.43□□□□□ -0.58
PMS1-217ENST00000450931 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
PMS1-217ENST00000450931 ADAMTSL3P82987 1691 aa11.4□□□□□ -0.58
PMS1-217ENST00000450931 NEO1Q92859 1461 aa11.38□□□□□ -0.59
PMS1-217ENST00000450931 FAM9AQ8IZU1 332 aaPredicted RBP11.38□□□□□ -0.59
PMS1-217ENST00000450931 SAMD9Q5K651 1589 aa11.38□□□□□ -0.59
PMS1-217ENST00000450931 ATP10BO94823 1461 aa11.36□□□□□ -0.59
PMS1-217ENST00000450931 RAPGEF6Q8TEU7 1601 aa11.35□□□□□ -0.59
PMS1-217ENST00000450931 BCORL1Q5H9F3 1711 aa11.35□□□□□ -0.59
PMS1-217ENST00000450931 PTPRMP28827 1452 aa11.35□□□□□ -0.59
PMS1-217ENST00000450931 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
PMS1-217ENST00000450931 FRMPD1Q5SYB0 1578 aa11.34□□□□□ -0.59
PMS1-217ENST00000450931 CFAP74Q9C0B2 1584 aa11.33□□□□□ -0.6
PMS1-217ENST00000450931 FBXO41Q8TF61 875 aa11.32□□□□□ -0.6
PMS1-217ENST00000450931 ARHGEF40Q8TER5 1519 aa11.32□□□□□ -0.6
PMS1-217ENST00000450931 PCF11O94913 1555 aaKnown RBP11.31□□□□□ -0.6
PMS1-217ENST00000450931 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
PMS1-217ENST00000450931 RICTORQ6R327 1708 aa11.29□□□□□ -0.6
PMS1-217ENST00000450931 ZMYM4Q5VZL5 1548 aa11.28□□□□□ -0.6
PMS1-217ENST00000450931 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.61
PMS1-217ENST00000450931 LMTK3Q96Q04 1460 aa11.27□□□□□ -0.61
PMS1-217ENST00000450931 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
PMS1-217ENST00000450931 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
PMS1-217ENST00000450931 DENND4BO75064 1496 aaPredicted RBP11.26□□□□□ -0.61
PMS1-217ENST00000450931 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
PMS1-217ENST00000450931 FANCAO15360 1455 aa11.25□□□□□ -0.61
PMS1-217ENST00000450931 EEA1Q15075 1411 aa11.25□□□□□ -0.61
PMS1-217ENST00000450931 MAGI2Q86UL8 1455 aa11.24□□□□□ -0.61
PMS1-217ENST00000450931 POGZQ7Z3K3 1410 aa11.24□□□□□ -0.61
PMS1-217ENST00000450931 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
PMS1-217ENST00000450931 AKNAQ7Z591 1439 aa11.23□□□□□ -0.61
PMS1-217ENST00000450931 ZFYVE16Q7Z3T8 1539 aa11.22□□□□□ -0.61
PMS1-217ENST00000450931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
PMS1-217ENST00000450931 TTC37Q6PGP7 1564 aa11.21□□□□□ -0.62
PMS1-217ENST00000450931 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
PMS1-217ENST00000450931 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
PMS1-217ENST00000450931 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
PMS1-217ENST00000450931 FER1L4A9Z1Z3 1794 aa11.19□□□□□ -0.62
PMS1-217ENST00000450931 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
PMS1-217ENST00000450931 PLEKHD1A6NEE1 506 aa11.18□□□□□ -0.62
PMS1-217ENST00000450931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
PMS1-217ENST00000450931 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
PMS1-217ENST00000450931 HECW1Q76N89 1606 aa11.17□□□□□ -0.62
PMS1-217ENST00000450931 SIGLEC1Q9BZZ2 1709 aa11.17□□□□□ -0.62
PMS1-217ENST00000450931 PREX1Q8TCU6 1659 aa11.16□□□□□ -0.62
PMS1-217ENST00000450931 ARHGEF12Q9NZN5 1544 aa11.16□□□□□ -0.62
PMS1-217ENST00000450931 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.63
PMS1-217ENST00000450931 PLCH2O75038 1416 aa11.14□□□□□ -0.63
PMS1-217ENST00000450931 YEATS2Q9ULM3 1422 aa11.14□□□□□ -0.63
PMS1-217ENST00000450931 C9orf84Q5VXU9 1444 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms