RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
LINC01004-202ENST00000450686 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
LINC01004-202ENST00000450686 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
LINC01004-202ENST00000450686 NUP160Q12769 1436 aa18.17■□□□□ 0.5
LINC01004-202ENST00000450686 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
LINC01004-202ENST00000450686 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
LINC01004-202ENST00000450686 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
LINC01004-202ENST00000450686 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
LINC01004-202ENST00000450686 RUSC2Q8N2Y8 1516 aa18.02■□□□□ 0.47
LINC01004-202ENST00000450686 KIF13AQ9H1H9 1805 aa17.98■□□□□ 0.47
LINC01004-202ENST00000450686 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
LINC01004-202ENST00000450686 IGF1RP08069 1367 aa17.89■□□□□ 0.45
LINC01004-202ENST00000450686 ADCY10Q96PN6 1610 aa17.88■□□□□ 0.45
LINC01004-202ENST00000450686 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
LINC01004-202ENST00000450686 CUL7Q14999 1698 aa17.85■□□□□ 0.45
LINC01004-202ENST00000450686 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
LINC01004-202ENST00000450686 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.45
LINC01004-202ENST00000450686 FAM69CQ0P6D2 419 aa17.81■□□□□ 0.44
LINC01004-202ENST00000450686 DIP2BQ9P265 1576 aa17.8■□□□□ 0.44
LINC01004-202ENST00000450686 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
LINC01004-202ENST00000450686 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
LINC01004-202ENST00000450686 TSPOAP1O95153 1857 aa17.78■□□□□ 0.44
LINC01004-202ENST00000450686 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.43
LINC01004-202ENST00000450686 NPM1P06748 294 aaKnown RBP eCLIP17.76■□□□□ 0.43
LINC01004-202ENST00000450686 PTPRGP23470 1445 aa17.71■□□□□ 0.43
LINC01004-202ENST00000450686 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
LINC01004-202ENST00000450686 KDM6BO15054 1643 aa17.66■□□□□ 0.42
LINC01004-202ENST00000450686 TNIKQ9UKE5 1360 aa17.65■□□□□ 0.42
LINC01004-202ENST00000450686 DISP1Q96F81 1524 aa17.64■□□□□ 0.41
LINC01004-202ENST00000450686 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.41
LINC01004-202ENST00000450686 ABCC2Q92887 1545 aa17.62■□□□□ 0.41
LINC01004-202ENST00000450686 ASXL2Q76L83 1435 aa17.61■□□□□ 0.41
LINC01004-202ENST00000450686 PPRC1Q5VV67 1664 aaKnown RBP17.6■□□□□ 0.41
LINC01004-202ENST00000450686 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
LINC01004-202ENST00000450686 KIAA0556O60303 1618 aa17.57■□□□□ 0.4
LINC01004-202ENST00000450686 UACAQ9BZF9 1416 aa17.56■□□□□ 0.4
LINC01004-202ENST00000450686 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
LINC01004-202ENST00000450686 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
LINC01004-202ENST00000450686 UHRF1BP1LA0JNW5 1464 aa17.55■□□□□ 0.4
LINC01004-202ENST00000450686 ZCCHC11Q5TAX3 1644 aaKnown RBP17.54■□□□□ 0.4
LINC01004-202ENST00000450686 KDM4FA0A1W2PPD8 638 aa17.54■□□□□ 0.4
LINC01004-202ENST00000450686 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.4
LINC01004-202ENST00000450686 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.39
LINC01004-202ENST00000450686 GLI2P10070 1586 aa17.51■□□□□ 0.39
LINC01004-202ENST00000450686 EPRSP07814 1512 aaKnown RBP17.49■□□□□ 0.39
LINC01004-202ENST00000450686 KDM5BQ9UGL1 1544 aa17.49■□□□□ 0.39
LINC01004-202ENST00000450686 COL17A1Q9UMD9 1497 aaPredicted RBP17.48■□□□□ 0.39
LINC01004-202ENST00000450686 MAP3K4Q9Y6R4 1608 aa17.47■□□□□ 0.39
LINC01004-202ENST00000450686 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
LINC01004-202ENST00000450686 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
LINC01004-202ENST00000450686 ARID3CA6NKF2 412 aa17.4■□□□□ 0.38
LINC01004-202ENST00000450686 ADGRL1O94910 1474 aa17.39■□□□□ 0.37
LINC01004-202ENST00000450686 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
LINC01004-202ENST00000450686 ABCA8O94911 1581 aa17.39■□□□□ 0.37
LINC01004-202ENST00000450686 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
LINC01004-202ENST00000450686 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
LINC01004-202ENST00000450686 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
LINC01004-202ENST00000450686 GOLGA3Q08378 1498 aa17.36■□□□□ 0.37
LINC01004-202ENST00000450686 TEX14Q8IWB6 1497 aa17.35■□□□□ 0.37
LINC01004-202ENST00000450686 CFAP43Q8NDM7 1665 aa17.3■□□□□ 0.36
LINC01004-202ENST00000450686 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
LINC01004-202ENST00000450686 RANGAP1P46060 587 aaPredicted RBP17.28■□□□□ 0.36
LINC01004-202ENST00000450686 MAGI3Q5TCQ9 1506 aa17.25■□□□□ 0.35
LINC01004-202ENST00000450686 ATP10BO94823 1461 aa17.24■□□□□ 0.35
LINC01004-202ENST00000450686 SAMD9Q5K651 1589 aa17.24■□□□□ 0.35
LINC01004-202ENST00000450686 KIF21BO75037 1637 aa17.24■□□□□ 0.35
LINC01004-202ENST00000450686 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
LINC01004-202ENST00000450686 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
LINC01004-202ENST00000450686 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
LINC01004-202ENST00000450686 HECW2Q9P2P5 1572 aa17.19■□□□□ 0.34
LINC01004-202ENST00000450686 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
LINC01004-202ENST00000450686 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
LINC01004-202ENST00000450686 ABCA9Q8IUA7 1624 aa17.16■□□□□ 0.34
LINC01004-202ENST00000450686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
LINC01004-202ENST00000450686 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
LINC01004-202ENST00000450686 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
LINC01004-202ENST00000450686 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
LINC01004-202ENST00000450686 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
LINC01004-202ENST00000450686 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
LINC01004-202ENST00000450686 ILDR1Q86SU0 546 aaPredicted RBP17.11■□□□□ 0.33
LINC01004-202ENST00000450686 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
LINC01004-202ENST00000450686 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
LINC01004-202ENST00000450686 EEA1Q15075 1411 aa17.05■□□□□ 0.32
LINC01004-202ENST00000450686 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
LINC01004-202ENST00000450686 TTC37Q6PGP7 1564 aa17.03■□□□□ 0.32
LINC01004-202ENST00000450686 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
LINC01004-202ENST00000450686 KCNA4P22459 653 aa17.03■□□□□ 0.32
LINC01004-202ENST00000450686 NEO1Q92859 1461 aa17.03■□□□□ 0.32
LINC01004-202ENST00000450686 ADAMTSL3P82987 1691 aa17.02■□□□□ 0.32
LINC01004-202ENST00000450686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17■□□□□ 0.31
LINC01004-202ENST00000450686 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
LINC01004-202ENST00000450686 EFCAB5A4FU69 1503 aa16.99■□□□□ 0.31
LINC01004-202ENST00000450686 PTPRMP28827 1452 aa16.99■□□□□ 0.31
LINC01004-202ENST00000450686 BCORL1Q5H9F3 1711 aa16.99■□□□□ 0.31
LINC01004-202ENST00000450686 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
LINC01004-202ENST00000450686 ARID4BQ4LE39 1312 aaPredicted RBP16.97■□□□□ 0.31
LINC01004-202ENST00000450686 SIGLEC1Q9BZZ2 1709 aa16.97■□□□□ 0.31
LINC01004-202ENST00000450686 PLEKHD1A6NEE1 506 aa16.97■□□□□ 0.31
LINC01004-202ENST00000450686 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
LINC01004-202ENST00000450686 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms