RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 NUP160Q12769 1436 aa17.14■□□□□ 0.33
SPTLC3-204ENST00000450297 CEP170Q5SW79 1584 aa17.13■□□□□ 0.33
SPTLC3-204ENST00000450297 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
SPTLC3-204ENST00000450297 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
SPTLC3-204ENST00000450297 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
SPTLC3-204ENST00000450297 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
SPTLC3-204ENST00000450297 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
SPTLC3-204ENST00000450297 NPM1P06748 294 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPTLC3-204ENST00000450297 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
SPTLC3-204ENST00000450297 SHROOM2Q13796 1616 aa17.02■□□□□ 0.31
SPTLC3-204ENST00000450297 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
SPTLC3-204ENST00000450297 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
SPTLC3-204ENST00000450297 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
SPTLC3-204ENST00000450297 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
SPTLC3-204ENST00000450297 IGF1RP08069 1367 aa16.89■□□□□ 0.29
SPTLC3-204ENST00000450297 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
SPTLC3-204ENST00000450297 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
SPTLC3-204ENST00000450297 KIF13AQ9H1H9 1805 aa16.84■□□□□ 0.29
SPTLC3-204ENST00000450297 PTPRGP23470 1445 aa16.81■□□□□ 0.28
SPTLC3-204ENST00000450297 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
SPTLC3-204ENST00000450297 ADCY10Q96PN6 1610 aa16.8■□□□□ 0.28
SPTLC3-204ENST00000450297 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
SPTLC3-204ENST00000450297 CUL7Q14999 1698 aa16.77■□□□□ 0.28
SPTLC3-204ENST00000450297 DIP2BQ9P265 1576 aa16.77■□□□□ 0.27
SPTLC3-204ENST00000450297 CARMIL2Q6F5E8 1435 aa16.76■□□□□ 0.27
SPTLC3-204ENST00000450297 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
SPTLC3-204ENST00000450297 KDM6BO15054 1643 aa16.71■□□□□ 0.27
SPTLC3-204ENST00000450297 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
SPTLC3-204ENST00000450297 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
SPTLC3-204ENST00000450297 TSPOAP1O95153 1857 aa16.67■□□□□ 0.26
SPTLC3-204ENST00000450297 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
SPTLC3-204ENST00000450297 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
SPTLC3-204ENST00000450297 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
SPTLC3-204ENST00000450297 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
SPTLC3-204ENST00000450297 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
SPTLC3-204ENST00000450297 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
SPTLC3-204ENST00000450297 DISP1Q96F81 1524 aa16.58■□□□□ 0.24
SPTLC3-204ENST00000450297 GLI2P10070 1586 aa16.55■□□□□ 0.24
SPTLC3-204ENST00000450297 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
SPTLC3-204ENST00000450297 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.24
SPTLC3-204ENST00000450297 KDM5BQ9UGL1 1544 aa16.52■□□□□ 0.24
SPTLC3-204ENST00000450297 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
SPTLC3-204ENST00000450297 TEX14Q8IWB6 1497 aa16.5■□□□□ 0.23
SPTLC3-204ENST00000450297 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
SPTLC3-204ENST00000450297 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
SPTLC3-204ENST00000450297 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
SPTLC3-204ENST00000450297 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
SPTLC3-204ENST00000450297 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
SPTLC3-204ENST00000450297 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
SPTLC3-204ENST00000450297 GOLGA3Q08378 1498 aa16.45■□□□□ 0.22
SPTLC3-204ENST00000450297 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
SPTLC3-204ENST00000450297 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
SPTLC3-204ENST00000450297 MAP3K4Q9Y6R4 1608 aa16.43■□□□□ 0.22
SPTLC3-204ENST00000450297 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
SPTLC3-204ENST00000450297 P3H3Q8IVL6 736 aa16.42■□□□□ 0.22
SPTLC3-204ENST00000450297 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
SPTLC3-204ENST00000450297 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
SPTLC3-204ENST00000450297 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
SPTLC3-204ENST00000450297 ABCA8O94911 1581 aa16.34■□□□□ 0.21
SPTLC3-204ENST00000450297 CTTNBP2Q8WZ74 1663 aa16.34■□□□□ 0.21
SPTLC3-204ENST00000450297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
SPTLC3-204ENST00000450297 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
SPTLC3-204ENST00000450297 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
SPTLC3-204ENST00000450297 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
SPTLC3-204ENST00000450297 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
SPTLC3-204ENST00000450297 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
SPTLC3-204ENST00000450297 CFAP43Q8NDM7 1665 aa16.28■□□□□ 0.2
SPTLC3-204ENST00000450297 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
SPTLC3-204ENST00000450297 HECW2Q9P2P5 1572 aa16.27■□□□□ 0.2
SPTLC3-204ENST00000450297 ATP10BO94823 1461 aa16.26■□□□□ 0.19
SPTLC3-204ENST00000450297 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
SPTLC3-204ENST00000450297 ARID4BQ4LE39 1312 aaPredicted RBP16.22■□□□□ 0.19
SPTLC3-204ENST00000450297 ARAP3Q8WWN8 1544 aa16.21■□□□□ 0.19
SPTLC3-204ENST00000450297 PHLDB1Q86UU1 1377 aa16.21■□□□□ 0.19
SPTLC3-204ENST00000450297 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
SPTLC3-204ENST00000450297 KIF21BO75037 1637 aa16.19■□□□□ 0.18
SPTLC3-204ENST00000450297 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
SPTLC3-204ENST00000450297 RAPGEF6Q8TEU7 1601 aa16.15■□□□□ 0.18
SPTLC3-204ENST00000450297 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
SPTLC3-204ENST00000450297 ABCA9Q8IUA7 1624 aa16.14■□□□□ 0.17
SPTLC3-204ENST00000450297 NEO1Q92859 1461 aa16.13■□□□□ 0.17
SPTLC3-204ENST00000450297 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
SPTLC3-204ENST00000450297 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
SPTLC3-204ENST00000450297 EEA1Q15075 1411 aa16.11■□□□□ 0.17
SPTLC3-204ENST00000450297 PTPRMP28827 1452 aa16.1■□□□□ 0.17
SPTLC3-204ENST00000450297 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
SPTLC3-204ENST00000450297 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
SPTLC3-204ENST00000450297 DENND4BO75064 1496 aaPredicted RBP16.07■□□□□ 0.16
SPTLC3-204ENST00000450297 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
SPTLC3-204ENST00000450297 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
SPTLC3-204ENST00000450297 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
SPTLC3-204ENST00000450297 FANCAO15360 1455 aa16.03■□□□□ 0.16
SPTLC3-204ENST00000450297 ADAMTSL3P82987 1691 aa16.03■□□□□ 0.16
SPTLC3-204ENST00000450297 MLECQ14165 292 aa16.03■□□□□ 0.16
SPTLC3-204ENST00000450297 FRMPD1Q5SYB0 1578 aa16.01■□□□□ 0.15
SPTLC3-204ENST00000450297 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
SPTLC3-204ENST00000450297 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
SPTLC3-204ENST00000450297 BCORL1Q5H9F3 1711 aa15.99■□□□□ 0.15
SPTLC3-204ENST00000450297 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
SPTLC3-204ENST00000450297 HSPA2P54652 639 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms