RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
HDLBP-222ENST00000449504 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
HDLBP-222ENST00000449504 KDM6BO15054 1643 aa13.26□□□□□ -0.29
HDLBP-222ENST00000449504 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
HDLBP-222ENST00000449504 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
HDLBP-222ENST00000449504 FHAD1B1AJZ9 1412 aa13.23□□□□□ -0.29
HDLBP-222ENST00000449504 DIP2BQ9P265 1576 aa13.21□□□□□ -0.29
HDLBP-222ENST00000449504 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
HDLBP-222ENST00000449504 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
HDLBP-222ENST00000449504 TSPOAP1O95153 1857 aa13.18□□□□□ -0.3
HDLBP-222ENST00000449504 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
HDLBP-222ENST00000449504 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-222ENST00000449504 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
HDLBP-222ENST00000449504 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
HDLBP-222ENST00000449504 MSH5O43196 834 aa13.11□□□□□ -0.31
HDLBP-222ENST00000449504 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
HDLBP-222ENST00000449504 FBXO41Q8TF61 875 aa13.07□□□□□ -0.32
HDLBP-222ENST00000449504 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
HDLBP-222ENST00000449504 PTPRGP23470 1445 aa13.03□□□□□ -0.32
HDLBP-222ENST00000449504 COL17A1Q9UMD9 1497 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-222ENST00000449504 TOP2BQ02880 1626 aa13.02□□□□□ -0.33
HDLBP-222ENST00000449504 ASXL2Q76L83 1435 aa13.01□□□□□ -0.33
HDLBP-222ENST00000449504 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
HDLBP-222ENST00000449504 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
HDLBP-222ENST00000449504 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
HDLBP-222ENST00000449504 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
HDLBP-222ENST00000449504 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.33
HDLBP-222ENST00000449504 ABCC2Q92887 1545 aa12.96□□□□□ -0.33
HDLBP-222ENST00000449504 GLI2P10070 1586 aa12.95□□□□□ -0.34
HDLBP-222ENST00000449504 TNIKQ9UKE5 1360 aa12.94□□□□□ -0.34
HDLBP-222ENST00000449504 CARMIL2Q6F5E8 1435 aa12.91□□□□□ -0.34
HDLBP-222ENST00000449504 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-222ENST00000449504 TEX14Q8IWB6 1497 aa12.91□□□□□ -0.34
HDLBP-222ENST00000449504 EPRSP07814 1512 aaKnown RBP12.9□□□□□ -0.34
HDLBP-222ENST00000449504 IGF1RP08069 1367 aa12.9□□□□□ -0.34
HDLBP-222ENST00000449504 CUL7Q14999 1698 aa12.89□□□□□ -0.35
HDLBP-222ENST00000449504 UACAQ9BZF9 1416 aa12.88□□□□□ -0.35
HDLBP-222ENST00000449504 LMTK3Q96Q04 1460 aa12.87□□□□□ -0.35
HDLBP-222ENST00000449504 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
HDLBP-222ENST00000449504 MAP3K4Q9Y6R4 1608 aa12.85□□□□□ -0.35
HDLBP-222ENST00000449504 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
HDLBP-222ENST00000449504 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
HDLBP-222ENST00000449504 KDM5BQ9UGL1 1544 aa12.82□□□□□ -0.36
HDLBP-222ENST00000449504 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
HDLBP-222ENST00000449504 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
HDLBP-222ENST00000449504 ZCCHC11Q5TAX3 1644 aaKnown RBP12.78□□□□□ -0.36
HDLBP-222ENST00000449504 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
HDLBP-222ENST00000449504 KIF21BO75037 1637 aa12.77□□□□□ -0.36
HDLBP-222ENST00000449504 WDR7Q9Y4E6 1490 aa12.77□□□□□ -0.37
HDLBP-222ENST00000449504 IQGAP2Q13576 1575 aa12.77□□□□□ -0.37
HDLBP-222ENST00000449504 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
HDLBP-222ENST00000449504 DISP3Q9P2K9 1392 aa12.76□□□□□ -0.37
HDLBP-222ENST00000449504 PTPRMP28827 1452 aa12.76□□□□□ -0.37
HDLBP-222ENST00000449504 DISP1Q96F81 1524 aa12.76□□□□□ -0.37
HDLBP-222ENST00000449504 SOCS7O14512 581 aa12.75□□□□□ -0.37
HDLBP-222ENST00000449504 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
HDLBP-222ENST00000449504 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
HDLBP-222ENST00000449504 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-222ENST00000449504 HSPA2P54652 639 aa12.72□□□□□ -0.37
HDLBP-222ENST00000449504 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
HDLBP-222ENST00000449504 ADRA2BP18089 450 aa12.7□□□□□ -0.38
HDLBP-222ENST00000449504 PCF11O94913 1555 aaKnown RBP12.69□□□□□ -0.38
HDLBP-222ENST00000449504 ARID3CA6NKF2 412 aa12.68□□□□□ -0.38
HDLBP-222ENST00000449504 RAPGEF3O95398 923 aa12.68□□□□□ -0.38
HDLBP-222ENST00000449504 CFAP43Q8NDM7 1665 aa12.67□□□□□ -0.38
HDLBP-222ENST00000449504 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
HDLBP-222ENST00000449504 UGGT2Q9NYU1 1516 aa12.66□□□□□ -0.38
HDLBP-222ENST00000449504 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
HDLBP-222ENST00000449504 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
HDLBP-222ENST00000449504 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
HDLBP-222ENST00000449504 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
HDLBP-222ENST00000449504 BCORL1Q5H9F3 1711 aa12.59□□□□□ -0.39
HDLBP-222ENST00000449504 PHLDB1Q86UU1 1377 aa12.58□□□□□ -0.4
HDLBP-222ENST00000449504 ABCA8O94911 1581 aa12.57□□□□□ -0.4
HDLBP-222ENST00000449504 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-222ENST00000449504 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
HDLBP-222ENST00000449504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-222ENST00000449504 MLECQ14165 292 aa12.56□□□□□ -0.4
HDLBP-222ENST00000449504 HNRNPUL2Q1KMD3 747 aaKnown RBP12.56□□□□□ -0.4
HDLBP-222ENST00000449504 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
HDLBP-222ENST00000449504 GOLGA3Q08378 1498 aa12.54□□□□□ -0.4
HDLBP-222ENST00000449504 ATP10BO94823 1461 aa12.53□□□□□ -0.4
HDLBP-222ENST00000449504 NEO1Q92859 1461 aa12.52□□□□□ -0.41
HDLBP-222ENST00000449504 SPATA31D1Q6ZQQ2 1576 aa12.51□□□□□ -0.41
HDLBP-222ENST00000449504 POGZQ7Z3K3 1410 aa12.5□□□□□ -0.41
HDLBP-222ENST00000449504 ABCA9Q8IUA7 1624 aa12.49□□□□□ -0.41
HDLBP-222ENST00000449504 FRMPD1Q5SYB0 1578 aa12.49□□□□□ -0.41
HDLBP-222ENST00000449504 DMRT2Q9Y5R5 561 aa12.48□□□□□ -0.41
HDLBP-222ENST00000449504 CEBPAP49715 358 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-222ENST00000449504 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-222ENST00000449504 AKNAQ7Z591 1439 aa12.46□□□□□ -0.41
HDLBP-222ENST00000449504 ARHGEF40Q8TER5 1519 aa12.46□□□□□ -0.42
HDLBP-222ENST00000449504 FANCAO15360 1455 aa12.46□□□□□ -0.42
HDLBP-222ENST00000449504 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
HDLBP-222ENST00000449504 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
HDLBP-222ENST00000449504 FHOD3Q2V2M9 1422 aa12.41□□□□□ -0.42
HDLBP-222ENST00000449504 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
HDLBP-222ENST00000449504 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
HDLBP-222ENST00000449504 RANGAP1P46060 587 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-222ENST00000449504 RICTORQ6R327 1708 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms