RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
LINC02561-201ENST00000449457 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
LINC02561-201ENST00000449457 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
LINC02561-201ENST00000449457 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
LINC02561-201ENST00000449457 ABCA10Q8WWZ4 1543 aa18.3■□□□□ 0.52
LINC02561-201ENST00000449457 GRIN2AQ12879 1464 aa18.29■□□□□ 0.52
LINC02561-201ENST00000449457 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
LINC02561-201ENST00000449457 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
LINC02561-201ENST00000449457 KIF13AQ9H1H9 1805 aa18.25■□□□□ 0.51
LINC02561-201ENST00000449457 NUP160Q12769 1436 aa18.21■□□□□ 0.51
LINC02561-201ENST00000449457 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
LINC02561-201ENST00000449457 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
LINC02561-201ENST00000449457 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
LINC02561-201ENST00000449457 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
LINC02561-201ENST00000449457 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
LINC02561-201ENST00000449457 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
LINC02561-201ENST00000449457 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
LINC02561-201ENST00000449457 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
LINC02561-201ENST00000449457 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
LINC02561-201ENST00000449457 FAM69CQ0P6D2 419 aa18.03■□□□□ 0.48
LINC02561-201ENST00000449457 DIP2BQ9P265 1576 aa18.03■□□□□ 0.48
LINC02561-201ENST00000449457 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
LINC02561-201ENST00000449457 TSPOAP1O95153 1857 aa18.02■□□□□ 0.48
LINC02561-201ENST00000449457 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
LINC02561-201ENST00000449457 ABCC10Q5T3U5 1492 aa17.99■□□□□ 0.47
LINC02561-201ENST00000449457 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
LINC02561-201ENST00000449457 KDM4FA0A1W2PPD8 638 aa17.96■□□□□ 0.47
LINC02561-201ENST00000449457 KDM6BO15054 1643 aa17.96■□□□□ 0.47
LINC02561-201ENST00000449457 TTBK1Q5TCY1 1321 aaPredicted RBP17.95■□□□□ 0.46
LINC02561-201ENST00000449457 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
LINC02561-201ENST00000449457 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
LINC02561-201ENST00000449457 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC02561-201ENST00000449457 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
LINC02561-201ENST00000449457 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
LINC02561-201ENST00000449457 PPRC1Q5VV67 1664 aaKnown RBP17.8■□□□□ 0.44
LINC02561-201ENST00000449457 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.44
LINC02561-201ENST00000449457 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
LINC02561-201ENST00000449457 CUL7Q14999 1698 aa17.76■□□□□ 0.43
LINC02561-201ENST00000449457 ADGRL1O94910 1474 aa17.75■□□□□ 0.43
LINC02561-201ENST00000449457 IGF1RP08069 1367 aa17.74■□□□□ 0.43
LINC02561-201ENST00000449457 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
LINC02561-201ENST00000449457 PTPRGP23470 1445 aa17.72■□□□□ 0.43
LINC02561-201ENST00000449457 ASXL2Q76L83 1435 aa17.72■□□□□ 0.43
LINC02561-201ENST00000449457 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
LINC02561-201ENST00000449457 HECW2Q9P2P5 1572 aa17.66■□□□□ 0.42
LINC02561-201ENST00000449457 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
LINC02561-201ENST00000449457 ZBTB22O15209 634 aa17.64■□□□□ 0.41
LINC02561-201ENST00000449457 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
LINC02561-201ENST00000449457 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
LINC02561-201ENST00000449457 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
LINC02561-201ENST00000449457 GLI2P10070 1586 aa17.62■□□□□ 0.41
LINC02561-201ENST00000449457 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
LINC02561-201ENST00000449457 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
LINC02561-201ENST00000449457 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
LINC02561-201ENST00000449457 EPRSP07814 1512 aaKnown RBP17.6■□□□□ 0.41
LINC02561-201ENST00000449457 PLB1Q6P1J6 1458 aa17.59■□□□□ 0.41
LINC02561-201ENST00000449457 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.41
LINC02561-201ENST00000449457 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
LINC02561-201ENST00000449457 UHRF1BP1LA0JNW5 1464 aa17.55■□□□□ 0.4
LINC02561-201ENST00000449457 KIAA0556O60303 1618 aa17.52■□□□□ 0.4
LINC02561-201ENST00000449457 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.39
LINC02561-201ENST00000449457 KIF21BO75037 1637 aa17.48■□□□□ 0.39
LINC02561-201ENST00000449457 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
LINC02561-201ENST00000449457 TEX14Q8IWB6 1497 aa17.46■□□□□ 0.39
LINC02561-201ENST00000449457 WDR7Q9Y4E6 1490 aa17.45■□□□□ 0.38
LINC02561-201ENST00000449457 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
LINC02561-201ENST00000449457 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
LINC02561-201ENST00000449457 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
LINC02561-201ENST00000449457 KCNH8Q96L42 1107 aa17.4■□□□□ 0.38
LINC02561-201ENST00000449457 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
LINC02561-201ENST00000449457 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
LINC02561-201ENST00000449457 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
LINC02561-201ENST00000449457 ABCA8O94911 1581 aa17.36■□□□□ 0.37
LINC02561-201ENST00000449457 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
LINC02561-201ENST00000449457 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
LINC02561-201ENST00000449457 P3H3Q8IVL6 736 aa17.28■□□□□ 0.36
LINC02561-201ENST00000449457 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
LINC02561-201ENST00000449457 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
LINC02561-201ENST00000449457 PTPRMP28827 1452 aa17.24■□□□□ 0.35
LINC02561-201ENST00000449457 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
LINC02561-201ENST00000449457 FRMPD1Q5SYB0 1578 aa17.23■□□□□ 0.35
LINC02561-201ENST00000449457 RAPGEF3O95398 923 aa17.22■□□□□ 0.35
LINC02561-201ENST00000449457 FBXO41Q8TF61 875 aa17.21■□□□□ 0.35
LINC02561-201ENST00000449457 ATP10BO94823 1461 aa17.2■□□□□ 0.34
LINC02561-201ENST00000449457 GOLGA3Q08378 1498 aa17.2■□□□□ 0.34
LINC02561-201ENST00000449457 ARAP3Q8WWN8 1544 aa17.18■□□□□ 0.34
LINC02561-201ENST00000449457 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
LINC02561-201ENST00000449457 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
LINC02561-201ENST00000449457 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
LINC02561-201ENST00000449457 RIMS1Q86UR5 1692 aaKnown RBP17.17■□□□□ 0.34
LINC02561-201ENST00000449457 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
LINC02561-201ENST00000449457 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
LINC02561-201ENST00000449457 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
LINC02561-201ENST00000449457 SIGLEC1Q9BZZ2 1709 aa17.14■□□□□ 0.33
LINC02561-201ENST00000449457 RANGAP1P46060 587 aaPredicted RBP17.13■□□□□ 0.33
LINC02561-201ENST00000449457 ARID4BQ4LE39 1312 aaPredicted RBP17.13■□□□□ 0.33
LINC02561-201ENST00000449457 HSPA2P54652 639 aa17.12■□□□□ 0.33
LINC02561-201ENST00000449457 RAPGEF6Q8TEU7 1601 aa17.11■□□□□ 0.33
LINC02561-201ENST00000449457 ARHGEF40Q8TER5 1519 aa17.1■□□□□ 0.33
LINC02561-201ENST00000449457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms