RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
HLA-DRB9-201ENST00000449413 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
HLA-DRB9-201ENST00000449413 IGF1RP08069 1367 aa20.76■□□□□ 0.91
HLA-DRB9-201ENST00000449413 CTTNBP2Q8WZ74 1663 aa20.7■□□□□ 0.9
HLA-DRB9-201ENST00000449413 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
HLA-DRB9-201ENST00000449413 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
HLA-DRB9-201ENST00000449413 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
HLA-DRB9-201ENST00000449413 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.89
HLA-DRB9-201ENST00000449413 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
HLA-DRB9-201ENST00000449413 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
HLA-DRB9-201ENST00000449413 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
HLA-DRB9-201ENST00000449413 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
HLA-DRB9-201ENST00000449413 NUP160Q12769 1436 aa20.53■□□□□ 0.88
HLA-DRB9-201ENST00000449413 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
HLA-DRB9-201ENST00000449413 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
HLA-DRB9-201ENST00000449413 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
HLA-DRB9-201ENST00000449413 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
HLA-DRB9-201ENST00000449413 SHROOM2Q13796 1616 aa20.45■□□□□ 0.87
HLA-DRB9-201ENST00000449413 CLIP1P30622 1438 aa20.42■□□□□ 0.86
HLA-DRB9-201ENST00000449413 ILDR1Q86SU0 546 aaPredicted RBP20.41■□□□□ 0.86
HLA-DRB9-201ENST00000449413 EFCAB5A4FU69 1503 aa20.4■□□□□ 0.86
HLA-DRB9-201ENST00000449413 FAM69CQ0P6D2 419 aa20.4■□□□□ 0.86
HLA-DRB9-201ENST00000449413 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
HLA-DRB9-201ENST00000449413 KDM4FA0A1W2PPD8 638 aa20.39■□□□□ 0.85
HLA-DRB9-201ENST00000449413 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
HLA-DRB9-201ENST00000449413 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
HLA-DRB9-201ENST00000449413 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
HLA-DRB9-201ENST00000449413 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
HLA-DRB9-201ENST00000449413 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
HLA-DRB9-201ENST00000449413 NPM1P06748 294 aaKnown RBP eCLIP20.32■□□□□ 0.84
HLA-DRB9-201ENST00000449413 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
HLA-DRB9-201ENST00000449413 JPH4Q96JJ6 628 aa20.31■□□□□ 0.84
HLA-DRB9-201ENST00000449413 DIP2BQ9P265 1576 aa20.28■□□□□ 0.84
HLA-DRB9-201ENST00000449413 KIAA0556O60303 1618 aa20.27■□□□□ 0.84
HLA-DRB9-201ENST00000449413 KDM6BO15054 1643 aa20.26■□□□□ 0.83
HLA-DRB9-201ENST00000449413 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
HLA-DRB9-201ENST00000449413 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
HLA-DRB9-201ENST00000449413 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
HLA-DRB9-201ENST00000449413 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
HLA-DRB9-201ENST00000449413 PCF11O94913 1555 aaKnown RBP20.19■□□□□ 0.82
HLA-DRB9-201ENST00000449413 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
HLA-DRB9-201ENST00000449413 CFAP43Q8NDM7 1665 aa20.11■□□□□ 0.81
HLA-DRB9-201ENST00000449413 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
HLA-DRB9-201ENST00000449413 FYCO1Q9BQS8 1478 aa20.09■□□□□ 0.81
HLA-DRB9-201ENST00000449413 CARMIL2Q6F5E8 1435 aa20.09■□□□□ 0.81
HLA-DRB9-201ENST00000449413 HECW1Q76N89 1606 aa20.07■□□□□ 0.8
HLA-DRB9-201ENST00000449413 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
HLA-DRB9-201ENST00000449413 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
HLA-DRB9-201ENST00000449413 TSPOAP1O95153 1857 aa20.05■□□□□ 0.8
HLA-DRB9-201ENST00000449413 P3H3Q8IVL6 736 aa20.04■□□□□ 0.8
HLA-DRB9-201ENST00000449413 CASKIN1Q8WXD9 1431 aa20.03■□□□□ 0.8
HLA-DRB9-201ENST00000449413 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
HLA-DRB9-201ENST00000449413 TIAM1Q13009 1591 aa20■□□□□ 0.79
HLA-DRB9-201ENST00000449413 PTPRGP23470 1445 aa19.97■□□□□ 0.79
HLA-DRB9-201ENST00000449413 MAP3K1Q13233 1512 aa19.97■□□□□ 0.79
HLA-DRB9-201ENST00000449413 HECW2Q9P2P5 1572 aa19.96■□□□□ 0.79
HLA-DRB9-201ENST00000449413 PLB1Q6P1J6 1458 aa19.96■□□□□ 0.79
HLA-DRB9-201ENST00000449413 ABCC2Q92887 1545 aa19.96■□□□□ 0.79
HLA-DRB9-201ENST00000449413 ABCA8O94911 1581 aa19.95■□□□□ 0.78
HLA-DRB9-201ENST00000449413 GLI2P10070 1586 aa19.95■□□□□ 0.78
HLA-DRB9-201ENST00000449413 ASXL2Q76L83 1435 aa19.93■□□□□ 0.78
HLA-DRB9-201ENST00000449413 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
HLA-DRB9-201ENST00000449413 PPRC1Q5VV67 1664 aaKnown RBP19.91■□□□□ 0.78
HLA-DRB9-201ENST00000449413 NUP153P49790 1475 aaKnown RBP19.9■□□□□ 0.78
HLA-DRB9-201ENST00000449413 COL17A1Q9UMD9 1497 aaPredicted RBP19.9■□□□□ 0.78
HLA-DRB9-201ENST00000449413 EPRSP07814 1512 aaKnown RBP19.87■□□□□ 0.77
HLA-DRB9-201ENST00000449413 CDK13Q14004 1512 aaKnown RBP19.86■□□□□ 0.77
HLA-DRB9-201ENST00000449413 UHRF1BP1LA0JNW5 1464 aa19.86■□□□□ 0.77
HLA-DRB9-201ENST00000449413 APLP2Q06481 763 aa19.84■□□□□ 0.77
HLA-DRB9-201ENST00000449413 EHBP1L1Q8N3D4 1523 aa19.84■□□□□ 0.77
HLA-DRB9-201ENST00000449413 TEX14Q8IWB6 1497 aa19.84■□□□□ 0.77
HLA-DRB9-201ENST00000449413 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.77
HLA-DRB9-201ENST00000449413 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.76
HLA-DRB9-201ENST00000449413 FBXO41Q8TF61 875 aa19.82■□□□□ 0.76
HLA-DRB9-201ENST00000449413 UACAQ9BZF9 1416 aa19.8■□□□□ 0.76
HLA-DRB9-201ENST00000449413 MAGI3Q5TCQ9 1506 aa19.79■□□□□ 0.76
HLA-DRB9-201ENST00000449413 MAP3K4Q9Y6R4 1608 aa19.78■□□□□ 0.76
HLA-DRB9-201ENST00000449413 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
HLA-DRB9-201ENST00000449413 SUPT6HQ7KZ85 1726 aaKnown RBP19.78■□□□□ 0.76
HLA-DRB9-201ENST00000449413 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
HLA-DRB9-201ENST00000449413 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
HLA-DRB9-201ENST00000449413 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
HLA-DRB9-201ENST00000449413 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
HLA-DRB9-201ENST00000449413 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
HLA-DRB9-201ENST00000449413 ATP10BO94823 1461 aa19.69■□□□□ 0.74
HLA-DRB9-201ENST00000449413 KIF14Q15058 1648 aa19.68■□□□□ 0.74
HLA-DRB9-201ENST00000449413 ARID3CA6NKF2 412 aa19.65■□□□□ 0.74
HLA-DRB9-201ENST00000449413 TROQ12816 1431 aaPredicted RBP19.64■□□□□ 0.73
HLA-DRB9-201ENST00000449413 NCOA2Q15596 1464 aa19.64■□□□□ 0.73
HLA-DRB9-201ENST00000449413 WDR7Q9Y4E6 1490 aa19.64■□□□□ 0.73
HLA-DRB9-201ENST00000449413 ITSN2Q9NZM3 1697 aa19.63■□□□□ 0.73
HLA-DRB9-201ENST00000449413 CD109Q6YHK3 1445 aa19.59■□□□□ 0.73
HLA-DRB9-201ENST00000449413 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
HLA-DRB9-201ENST00000449413 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
HLA-DRB9-201ENST00000449413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
HLA-DRB9-201ENST00000449413 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
HLA-DRB9-201ENST00000449413 CDK11AQ9UQ88 783 aaPredicted RBP19.57■□□□□ 0.72
HLA-DRB9-201ENST00000449413 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
HLA-DRB9-201ENST00000449413 CDC42BPAQ5VT25 1732 aa19.56■□□□□ 0.72
HLA-DRB9-201ENST00000449413 TTC37Q6PGP7 1564 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms