RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
CDK3-202ENST00000448471 FAM69CQ0P6D2 419 aa24.72■■□□□ 1.55
CDK3-202ENST00000448471 ABCC10Q5T3U5 1492 aa24.72■■□□□ 1.55
CDK3-202ENST00000448471 NPM1P06748 294 aaKnown RBP eCLIP24.71■■□□□ 1.55
CDK3-202ENST00000448471 MAPKBP1O60336 1514 aa24.69■■□□□ 1.54
CDK3-202ENST00000448471 DIP2BQ9P265 1576 aa24.65■■□□□ 1.54
CDK3-202ENST00000448471 ADCY10Q96PN6 1610 aa24.64■■□□□ 1.54
CDK3-202ENST00000448471 KIAA0586Q9BVV6 1533 aa24.59■■□□□ 1.53
CDK3-202ENST00000448471 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
CDK3-202ENST00000448471 KDM6BO15054 1643 aa24.55■■□□□ 1.52
CDK3-202ENST00000448471 IGF1RP08069 1367 aa24.52■■□□□ 1.52
CDK3-202ENST00000448471 CUL7Q14999 1698 aa24.5■■□□□ 1.51
CDK3-202ENST00000448471 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
CDK3-202ENST00000448471 KDM4FA0A1W2PPD8 638 aa24.46■■□□□ 1.51
CDK3-202ENST00000448471 TSPOAP1O95153 1857 aa24.45■■□□□ 1.5
CDK3-202ENST00000448471 PTPRGP23470 1445 aa24.43■■□□□ 1.5
CDK3-202ENST00000448471 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
CDK3-202ENST00000448471 TNIKQ9UKE5 1360 aa24.37■■□□□ 1.49
CDK3-202ENST00000448471 ABCC2Q92887 1545 aa24.37■■□□□ 1.49
CDK3-202ENST00000448471 CARMIL1Q5VZK9 1371 aa24.36■■□□□ 1.49
CDK3-202ENST00000448471 CARMIL2Q6F5E8 1435 aa24.36■■□□□ 1.49
CDK3-202ENST00000448471 ASXL2Q76L83 1435 aa24.32■■□□□ 1.48
CDK3-202ENST00000448471 PLB1Q6P1J6 1458 aa24.31■■□□□ 1.48
CDK3-202ENST00000448471 GLI2P10070 1586 aa24.29■■□□□ 1.48
CDK3-202ENST00000448471 IQGAP2Q13576 1575 aa24.29■■□□□ 1.48
CDK3-202ENST00000448471 PPRC1Q5VV67 1664 aaKnown RBP24.27■■□□□ 1.48
CDK3-202ENST00000448471 UHRF1BP1LA0JNW5 1464 aa24.27■■□□□ 1.48
CDK3-202ENST00000448471 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
CDK3-202ENST00000448471 DISP1Q96F81 1524 aa24.22■■□□□ 1.47
CDK3-202ENST00000448471 ADGRL1O94910 1474 aa24.19■■□□□ 1.46
CDK3-202ENST00000448471 EPRSP07814 1512 aaKnown RBP24.17■■□□□ 1.46
CDK3-202ENST00000448471 KDM5BQ9UGL1 1544 aa24.16■■□□□ 1.46
CDK3-202ENST00000448471 COL17A1Q9UMD9 1497 aaPredicted RBP24.16■■□□□ 1.46
CDK3-202ENST00000448471 MAP3K4Q9Y6R4 1608 aa24.14■■□□□ 1.45
CDK3-202ENST00000448471 ILDR1Q86SU0 546 aaPredicted RBP24.12■■□□□ 1.45
CDK3-202ENST00000448471 UGGT2Q9NYU1 1516 aa24.12■■□□□ 1.45
CDK3-202ENST00000448471 TEX14Q8IWB6 1497 aa24.11■■□□□ 1.45
CDK3-202ENST00000448471 ZCCHC11Q5TAX3 1644 aaKnown RBP24.11■■□□□ 1.45
CDK3-202ENST00000448471 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
CDK3-202ENST00000448471 KIAA0556O60303 1618 aa24.09■■□□□ 1.45
CDK3-202ENST00000448471 WDR7Q9Y4E6 1490 aa24.02■■□□□ 1.44
CDK3-202ENST00000448471 HECW2Q9P2P5 1572 aa23.99■■□□□ 1.43
CDK3-202ENST00000448471 CD109Q6YHK3 1445 aa23.92■■□□□ 1.42
CDK3-202ENST00000448471 MAGI3Q5TCQ9 1506 aa23.91■■□□□ 1.42
CDK3-202ENST00000448471 CTTNBP2Q8WZ74 1663 aa23.9■■□□□ 1.42
CDK3-202ENST00000448471 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
CDK3-202ENST00000448471 CFAP43Q8NDM7 1665 aa23.9■■□□□ 1.42
CDK3-202ENST00000448471 ABCA8O94911 1581 aa23.89■■□□□ 1.41
CDK3-202ENST00000448471 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
CDK3-202ENST00000448471 KIF21BO75037 1637 aa23.77■■□□□ 1.4
CDK3-202ENST00000448471 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
CDK3-202ENST00000448471 ARAP3Q8WWN8 1544 aa23.73■■□□□ 1.39
CDK3-202ENST00000448471 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
CDK3-202ENST00000448471 ATP10BO94823 1461 aa23.68■■□□□ 1.38
CDK3-202ENST00000448471 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
CDK3-202ENST00000448471 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
CDK3-202ENST00000448471 ABCA9Q8IUA7 1624 aa23.64■■□□□ 1.38
CDK3-202ENST00000448471 PHLDB1Q86UU1 1377 aa23.63■■□□□ 1.37
CDK3-202ENST00000448471 PTPRMP28827 1452 aa23.6■■□□□ 1.37
CDK3-202ENST00000448471 ADAMTSL3P82987 1691 aa23.59■■□□□ 1.37
CDK3-202ENST00000448471 RAPGEF3O95398 923 aa23.59■■□□□ 1.37
CDK3-202ENST00000448471 NEO1Q92859 1461 aa23.57■■□□□ 1.36
CDK3-202ENST00000448471 FBXO41Q8TF61 875 aa23.57■■□□□ 1.36
CDK3-202ENST00000448471 SAMD9Q5K651 1589 aa23.55■■□□□ 1.36
CDK3-202ENST00000448471 RAPGEF6Q8TEU7 1601 aa23.55■■□□□ 1.36
CDK3-202ENST00000448471 LOC105371045A0A1W2PR82 267 aa23.54■■□□□ 1.36
CDK3-202ENST00000448471 EEA1Q15075 1411 aa23.53■■□□□ 1.36
CDK3-202ENST00000448471 FRMPD1Q5SYB0 1578 aa23.53■■□□□ 1.36
CDK3-202ENST00000448471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.52■■□□□ 1.36
CDK3-202ENST00000448471 HNRNPUL2Q1KMD3 747 aaKnown RBP23.52■■□□□ 1.36
CDK3-202ENST00000448471 BCORL1Q5H9F3 1711 aa23.5■■□□□ 1.35
CDK3-202ENST00000448471 ARID4BQ4LE39 1312 aaPredicted RBP23.49■■□□□ 1.35
CDK3-202ENST00000448471 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
CDK3-202ENST00000448471 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
CDK3-202ENST00000448471 PCF11O94913 1555 aaKnown RBP23.45■■□□□ 1.35
CDK3-202ENST00000448471 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
CDK3-202ENST00000448471 ARHGEF40Q8TER5 1519 aa23.43■■□□□ 1.34
CDK3-202ENST00000448471 LMTK3Q96Q04 1460 aa23.42■■□□□ 1.34
CDK3-202ENST00000448471 DENND4BO75064 1496 aaPredicted RBP23.41■■□□□ 1.34
CDK3-202ENST00000448471 FHOD3Q2V2M9 1422 aa23.4■■□□□ 1.34
CDK3-202ENST00000448471 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
CDK3-202ENST00000448471 RIMS1Q86UR5 1692 aaKnown RBP23.39■■□□□ 1.33
CDK3-202ENST00000448471 AKNAQ7Z591 1439 aa23.37■■□□□ 1.33
CDK3-202ENST00000448471 RICTORQ6R327 1708 aa23.37■■□□□ 1.33
CDK3-202ENST00000448471 PLEKHD1A6NEE1 506 aa23.37■■□□□ 1.33
CDK3-202ENST00000448471 FANCAO15360 1455 aa23.35■■□□□ 1.33
CDK3-202ENST00000448471 CFAP74Q9C0B2 1584 aa23.35■■□□□ 1.33
CDK3-202ENST00000448471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.33
CDK3-202ENST00000448471 POGZQ7Z3K3 1410 aa23.31■■□□□ 1.32
CDK3-202ENST00000448471 ZMYM4Q5VZL5 1548 aa23.3■■□□□ 1.32
CDK3-202ENST00000448471 TTC37Q6PGP7 1564 aa23.3■■□□□ 1.32
CDK3-202ENST00000448471 HSPA2P54652 639 aa23.29■■□□□ 1.32
CDK3-202ENST00000448471 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
CDK3-202ENST00000448471 ZFYVE16Q7Z3T8 1539 aa23.29■■□□□ 1.32
CDK3-202ENST00000448471 YEATS2Q9ULM3 1422 aa23.28■■□□□ 1.32
CDK3-202ENST00000448471 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
CDK3-202ENST00000448471 SIGLEC1Q9BZZ2 1709 aa23.26■■□□□ 1.31
CDK3-202ENST00000448471 MAGI2Q86UL8 1455 aa23.25■■□□□ 1.31
CDK3-202ENST00000448471 HECW1Q76N89 1606 aa23.22■■□□□ 1.31
CDK3-202ENST00000448471 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms