RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 ERCC6L2Q5T890 1561 aa41.03■■■■■ 4.16
MRPL28-205ENST00000447696 CARMIL1Q5VZK9 1371 aa41.01■■■■■ 4.16
MRPL28-205ENST00000447696 JPH4Q96JJ6 628 aa40.94■■■■■ 4.14
MRPL28-205ENST00000447696 KIAA0586Q9BVV6 1533 aa40.93■■■■■ 4.14
MRPL28-205ENST00000447696 PRG4Q92954 1404 aaPredicted RBP40.92■■■■■ 4.14
MRPL28-205ENST00000447696 RAPGEF2Q9Y4G8 1499 aa40.75■■■■■ 4.11
MRPL28-205ENST00000447696 IQGAP2Q13576 1575 aa40.63■■■■■ 4.09
MRPL28-205ENST00000447696 KIF13AQ9H1H9 1805 aa40.59■■■■■ 4.09
MRPL28-205ENST00000447696 NPM1P06748 294 aaKnown RBP eCLIP40.56■■■■■ 4.08
MRPL28-205ENST00000447696 PRXQ9BXM0 1461 aa40.51■■■■■ 4.08
MRPL28-205ENST00000447696 CARMIL2Q6F5E8 1435 aa40.5■■■■■ 4.07
MRPL28-205ENST00000447696 ABCC10Q5T3U5 1492 aa40.49■■■■■ 4.07
MRPL28-205ENST00000447696 FAM69CQ0P6D2 419 aa40.48■■■■■ 4.07
MRPL28-205ENST00000447696 MAPKBP1O60336 1514 aa40.43■■■■■ 4.06
MRPL28-205ENST00000447696 UGGT2Q9NYU1 1516 aa40.42■■■■■ 4.06
MRPL28-205ENST00000447696 EEA1Q15075 1411 aa40.4■■■■■ 4.06
MRPL28-205ENST00000447696 TNIKQ9UKE5 1360 aa40.39■■■■■ 4.06
MRPL28-205ENST00000447696 PTPRGP23470 1445 aa40.38■■■■■ 4.05
MRPL28-205ENST00000447696 DISP1Q96F81 1524 aa40.37■■■■■ 4.05
MRPL28-205ENST00000447696 ADCY10Q96PN6 1610 aa40.35■■■■■ 4.05
MRPL28-205ENST00000447696 CTTNBP2Q8WZ74 1663 aa40.35■■■■■ 4.05
MRPL28-205ENST00000447696 CSRNP3Q8WYN3 585 aa40.33■■■■■ 4.05
MRPL28-205ENST00000447696 DIP2BQ9P265 1576 aa40.28■■■■■ 4.04
MRPL28-205ENST00000447696 KIAA0556O60303 1618 aa40.24■■■■■ 4.03
MRPL28-205ENST00000447696 CHIC1Q5VXU3 224 aa40.18■■■■■ 4.02
MRPL28-205ENST00000447696 GOLGA3Q08378 1498 aa40.17■■■■■ 4.02
MRPL28-205ENST00000447696 TTBK1Q5TCY1 1321 aaPredicted RBP40.15■■■■■ 4.02
MRPL28-205ENST00000447696 UHRF1BP1LA0JNW5 1464 aa40.14■■■■■ 4.02
MRPL28-205ENST00000447696 KDM6BO15054 1643 aa40.13■■■■■ 4.02
MRPL28-205ENST00000447696 UACAQ9BZF9 1416 aa40.11■■■■■ 4.01
MRPL28-205ENST00000447696 ABCC2Q92887 1545 aa40.11■■■■■ 4.01
MRPL28-205ENST00000447696 KDM4FA0A1W2PPD8 638 aa40.03■■■■■ 4
MRPL28-205ENST00000447696 FAM9AQ8IZU1 332 aaPredicted RBP40■■■■□ 3.99
MRPL28-205ENST00000447696 KIF21BO75037 1637 aa39.98■■■■□ 3.99
MRPL28-205ENST00000447696 KDM5BQ9UGL1 1544 aa39.93■■■■□ 3.98
MRPL28-205ENST00000447696 TSPOAP1O95153 1857 aa39.9■■■■□ 3.98
MRPL28-205ENST00000447696 PLB1Q6P1J6 1458 aa39.88■■■■□ 3.98
MRPL28-205ENST00000447696 ASXL2Q76L83 1435 aa39.86■■■■□ 3.97
MRPL28-205ENST00000447696 SAMD9Q5K651 1589 aa39.85■■■■□ 3.97
MRPL28-205ENST00000447696 ABCA8O94911 1581 aa39.84■■■■□ 3.97
MRPL28-205ENST00000447696 ZCCHC11Q5TAX3 1644 aaKnown RBP39.8■■■■□ 3.96
MRPL28-205ENST00000447696 GLI2P10070 1586 aa39.79■■■■□ 3.96
MRPL28-205ENST00000447696 P3H3Q8IVL6 736 aa39.71■■■■□ 3.95
MRPL28-205ENST00000447696 EPRSP07814 1512 aaKnown RBP39.64■■■■□ 3.94
MRPL28-205ENST00000447696 EFCAB5A4FU69 1503 aa39.63■■■■□ 3.93
MRPL28-205ENST00000447696 WDR7Q9Y4E6 1490 aa39.62■■■■□ 3.93
MRPL28-205ENST00000447696 PPRC1Q5VV67 1664 aaKnown RBP39.6■■■■□ 3.93
MRPL28-205ENST00000447696 TEX14Q8IWB6 1497 aa39.56■■■■□ 3.92
MRPL28-205ENST00000447696 UBTFP17480 764 aaKnown RBP39.55■■■■□ 3.92
MRPL28-205ENST00000447696 RANGAP1P46060 587 aaPredicted RBP39.55■■■■□ 3.92
MRPL28-205ENST00000447696 FHOD3Q2V2M9 1422 aa39.55■■■■□ 3.92
MRPL28-205ENST00000447696 ADGRL1O94910 1474 aa39.55■■■■□ 3.92
MRPL28-205ENST00000447696 RAPGEF6Q8TEU7 1601 aa39.53■■■■□ 3.92
MRPL28-205ENST00000447696 ILDR1Q86SU0 546 aaPredicted RBP39.51■■■■□ 3.92
MRPL28-205ENST00000447696 MAP3K4Q9Y6R4 1608 aa39.5■■■■□ 3.91
MRPL28-205ENST00000447696 ATP10BO94823 1461 aa39.48■■■■□ 3.91
MRPL28-205ENST00000447696 EHMT2Q96KQ7 1210 aa39.45■■■■□ 3.91
MRPL28-205ENST00000447696 COL17A1Q9UMD9 1497 aaPredicted RBP39.44■■■■□ 3.9
MRPL28-205ENST00000447696 NUP153P49790 1475 aaKnown RBP39.39■■■■□ 3.9
MRPL28-205ENST00000447696 ARID3CA6NKF2 412 aa39.36■■■■□ 3.89
MRPL28-205ENST00000447696 CFAP43Q8NDM7 1665 aa39.32■■■■□ 3.89
MRPL28-205ENST00000447696 KCNH8Q96L42 1107 aa39.32■■■■□ 3.89
MRPL28-205ENST00000447696 ARHGAP35Q9NRY4 1499 aa39.31■■■■□ 3.88
MRPL28-205ENST00000447696 CD109Q6YHK3 1445 aa39.27■■■■□ 3.88
MRPL28-205ENST00000447696 MAGI3Q5TCQ9 1506 aa39.26■■■■□ 3.88
MRPL28-205ENST00000447696 FMN1Q68DA7 1419 aa39.25■■■■□ 3.87
MRPL28-205ENST00000447696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.21■■■■□ 3.87
MRPL28-205ENST00000447696 HNRNPUL2Q1KMD3 747 aaKnown RBP39.21■■■■□ 3.87
MRPL28-205ENST00000447696 HECW2Q9P2P5 1572 aa39.2■■■■□ 3.87
MRPL28-205ENST00000447696 ABCA9Q8IUA7 1624 aa39.16■■■■□ 3.86
MRPL28-205ENST00000447696 HECW1Q76N89 1606 aa39.1■■■■□ 3.85
MRPL28-205ENST00000447696 PLEKHD1A6NEE1 506 aa39.09■■■■□ 3.85
MRPL28-205ENST00000447696 CDK13Q14004 1512 aaKnown RBP39.04■■■■□ 3.84
MRPL28-205ENST00000447696 PHLDB1Q86UU1 1377 aa38.97■■■■□ 3.83
MRPL28-205ENST00000447696 CLIP1P30622 1438 aa38.95■■■■□ 3.83
MRPL28-205ENST00000447696 ARAP3Q8WWN8 1544 aa38.94■■■■□ 3.82
MRPL28-205ENST00000447696 ATP1B4Q9UN42 357 aaPredicted RBP38.93■■■■□ 3.82
MRPL28-205ENST00000447696 NEO1Q92859 1461 aa38.92■■■■□ 3.82
MRPL28-205ENST00000447696 CASKIN1Q8WXD9 1431 aa38.89■■■■□ 3.82
MRPL28-205ENST00000447696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.89■■■■□ 3.82
MRPL28-205ENST00000447696 CDK11AQ9UQ88 783 aaPredicted RBP38.87■■■■□ 3.81
MRPL28-205ENST00000447696 PCF11O94913 1555 aaKnown RBP38.85■■■■□ 3.81
MRPL28-205ENST00000447696 TTC37Q6PGP7 1564 aa38.82■■■■□ 3.81
MRPL28-205ENST00000447696 CCDC18Q5T9S5 1454 aa38.8■■■■□ 3.8
MRPL28-205ENST00000447696 FYCO1Q9BQS8 1478 aa38.79■■■■□ 3.8
MRPL28-205ENST00000447696 LRRIQ1Q96JM4 1722 aa38.79■■■■□ 3.8
MRPL28-205ENST00000447696 TROQ12816 1431 aaPredicted RBP38.77■■■■□ 3.8
MRPL28-205ENST00000447696 CFAP74Q9C0B2 1584 aa38.75■■■■□ 3.79
MRPL28-205ENST00000447696 FANCAO15360 1455 aa38.73■■■■□ 3.79
MRPL28-205ENST00000447696 KIF14Q15058 1648 aa38.71■■■■□ 3.79
MRPL28-205ENST00000447696 FBXO41Q8TF61 875 aa38.7■■■■□ 3.79
MRPL28-205ENST00000447696 PLCH2O75038 1416 aa38.68■■■■□ 3.78
MRPL28-205ENST00000447696 CEP162Q5TB80 1403 aa38.68■■■■□ 3.78
MRPL28-205ENST00000447696 AKNAQ7Z591 1439 aa38.67■■■■□ 3.78
MRPL28-205ENST00000447696 FRMPD1Q5SYB0 1578 aa38.62■■■■□ 3.77
MRPL28-205ENST00000447696 PTPRMP28827 1452 aa38.62■■■■□ 3.77
MRPL28-205ENST00000447696 RAPGEF3O95398 923 aa38.62■■■■□ 3.77
MRPL28-205ENST00000447696 DENND4BO75064 1496 aaPredicted RBP38.6■■■■□ 3.77
MRPL28-205ENST00000447696 MYO5CQ9NQX4 1742 aa38.6■■■■□ 3.77
MRPL28-205ENST00000447696 ADAMTSL3P82987 1691 aa38.58■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms