RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
SSR4-205ENST00000447375 KDM6BO15054 1643 aa22.24■■□□□ 1.15
SSR4-205ENST00000447375 WRNQ14191 1432 aaPredicted RBP eCLIP22.24■■□□□ 1.15
SSR4-205ENST00000447375 MAPKBP1O60336 1514 aa22.22■■□□□ 1.15
SSR4-205ENST00000447375 DIP2BQ9P265 1576 aa22.21■■□□□ 1.15
SSR4-205ENST00000447375 ERICH3Q5RHP9 1530 aa22.14■■□□□ 1.13
SSR4-205ENST00000447375 ADCY10Q96PN6 1610 aa22.09■■□□□ 1.13
SSR4-205ENST00000447375 TSPOAP1O95153 1857 aa22.09■■□□□ 1.13
SSR4-205ENST00000447375 ADGRL1O94910 1474 aa22.03■■□□□ 1.12
SSR4-205ENST00000447375 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
SSR4-205ENST00000447375 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
SSR4-205ENST00000447375 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
SSR4-205ENST00000447375 HECW2Q9P2P5 1572 aa21.94■■□□□ 1.1
SSR4-205ENST00000447375 KIAA0586Q9BVV6 1533 aa21.9■■□□□ 1.1
SSR4-205ENST00000447375 PTPRGP23470 1445 aa21.89■■□□□ 1.09
SSR4-205ENST00000447375 TTBK1Q5TCY1 1321 aaPredicted RBP21.88■■□□□ 1.09
SSR4-205ENST00000447375 ASXL2Q76L83 1435 aa21.84■■□□□ 1.09
SSR4-205ENST00000447375 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
SSR4-205ENST00000447375 COL17A1Q9UMD9 1497 aaPredicted RBP21.83■■□□□ 1.09
SSR4-205ENST00000447375 GLI2P10070 1586 aa21.83■■□□□ 1.09
SSR4-205ENST00000447375 PPRC1Q5VV67 1664 aaKnown RBP21.83■■□□□ 1.09
SSR4-205ENST00000447375 ABCC2Q92887 1545 aa21.82■■□□□ 1.08
SSR4-205ENST00000447375 FBXO41Q8TF61 875 aa21.81■■□□□ 1.08
SSR4-205ENST00000447375 TNIKQ9UKE5 1360 aa21.76■■□□□ 1.07
SSR4-205ENST00000447375 IGF1RP08069 1367 aa21.75■■□□□ 1.07
SSR4-205ENST00000447375 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
SSR4-205ENST00000447375 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
SSR4-205ENST00000447375 UHRF1BP1LA0JNW5 1464 aa21.7■■□□□ 1.06
SSR4-205ENST00000447375 EPRSP07814 1512 aaKnown RBP21.7■■□□□ 1.06
SSR4-205ENST00000447375 CUL7Q14999 1698 aa21.68■■□□□ 1.06
SSR4-205ENST00000447375 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
SSR4-205ENST00000447375 MAP3K4Q9Y6R4 1608 aa21.66■■□□□ 1.06
SSR4-205ENST00000447375 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
SSR4-205ENST00000447375 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
SSR4-205ENST00000447375 CARMIL1Q5VZK9 1371 aa21.59■■□□□ 1.05
SSR4-205ENST00000447375 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
SSR4-205ENST00000447375 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
SSR4-205ENST00000447375 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
SSR4-205ENST00000447375 CD109Q6YHK3 1445 aa21.48■■□□□ 1.03
SSR4-205ENST00000447375 WDR7Q9Y4E6 1490 aa21.48■■□□□ 1.03
SSR4-205ENST00000447375 MAGI3Q5TCQ9 1506 aa21.46■■□□□ 1.03
SSR4-205ENST00000447375 KCNH8Q96L42 1107 aa21.46■■□□□ 1.03
SSR4-205ENST00000447375 LMTK3Q96Q04 1460 aa21.43■■□□□ 1.02
SSR4-205ENST00000447375 KIF21BO75037 1637 aa21.43■■□□□ 1.02
SSR4-205ENST00000447375 PTPRMP28827 1452 aa21.39■■□□□ 1.02
SSR4-205ENST00000447375 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.01
SSR4-205ENST00000447375 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
SSR4-205ENST00000447375 KIAA0556O60303 1618 aa21.34■■□□□ 1.01
SSR4-205ENST00000447375 ARAP3Q8WWN8 1544 aa21.32■■□□□ 1
SSR4-205ENST00000447375 ADAMTSL3P82987 1691 aa21.31■■□□□ 1
SSR4-205ENST00000447375 PCF11O94913 1555 aaKnown RBP21.29■■□□□ 1
SSR4-205ENST00000447375 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
SSR4-205ENST00000447375 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
SSR4-205ENST00000447375 SOCS7O14512 581 aa21.24■□□□□ 0.99
SSR4-205ENST00000447375 ILDR2Q71H61 639 aa21.24■□□□□ 0.99
SSR4-205ENST00000447375 CERKQ8TCT0 537 aa21.24■□□□□ 0.99
SSR4-205ENST00000447375 RAPGEF3O95398 923 aa21.23■□□□□ 0.99
SSR4-205ENST00000447375 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
SSR4-205ENST00000447375 ABCA8O94911 1581 aa21.22■□□□□ 0.99
SSR4-205ENST00000447375 HSPA2P54652 639 aa21.21■□□□□ 0.99
SSR4-205ENST00000447375 DISP3Q9P2K9 1392 aa21.2■□□□□ 0.98
SSR4-205ENST00000447375 MADDQ8WXG6 1647 aa21.18■□□□□ 0.98
SSR4-205ENST00000447375 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
SSR4-205ENST00000447375 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
SSR4-205ENST00000447375 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
SSR4-205ENST00000447375 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
SSR4-205ENST00000447375 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
SSR4-205ENST00000447375 NEO1Q92859 1461 aa21.09■□□□□ 0.97
SSR4-205ENST00000447375 ATP10BO94823 1461 aa21.08■□□□□ 0.97
SSR4-205ENST00000447375 RIMS1Q86UR5 1692 aaKnown RBP21.08■□□□□ 0.96
SSR4-205ENST00000447375 ABCA9Q8IUA7 1624 aa21.07■□□□□ 0.96
SSR4-205ENST00000447375 CTTNBP2Q8WZ74 1663 aa21.04■□□□□ 0.96
SSR4-205ENST00000447375 FRMPD1Q5SYB0 1578 aa21.03■□□□□ 0.96
SSR4-205ENST00000447375 P3H3Q8IVL6 736 aa21■□□□□ 0.95
SSR4-205ENST00000447375 POGZQ7Z3K3 1410 aa20.99■□□□□ 0.95
SSR4-205ENST00000447375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
SSR4-205ENST00000447375 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
SSR4-205ENST00000447375 ARHGEF40Q8TER5 1519 aa20.97■□□□□ 0.95
SSR4-205ENST00000447375 DENND4BO75064 1496 aaPredicted RBP20.95■□□□□ 0.94
SSR4-205ENST00000447375 FANCAO15360 1455 aa20.94■□□□□ 0.94
SSR4-205ENST00000447375 MLECQ14165 292 aa20.94■□□□□ 0.94
SSR4-205ENST00000447375 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
SSR4-205ENST00000447375 DMRT2Q9Y5R5 561 aa20.92■□□□□ 0.94
SSR4-205ENST00000447375 FHOD3Q2V2M9 1422 aa20.91■□□□□ 0.94
SSR4-205ENST00000447375 SPATA31D1Q6ZQQ2 1576 aa20.89■□□□□ 0.94
SSR4-205ENST00000447375 YEATS2Q9ULM3 1422 aa20.88■□□□□ 0.93
SSR4-205ENST00000447375 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
SSR4-205ENST00000447375 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
SSR4-205ENST00000447375 ZFYVE16Q7Z3T8 1539 aa20.84■□□□□ 0.93
SSR4-205ENST00000447375 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
SSR4-205ENST00000447375 RAPGEF6Q8TEU7 1601 aa20.83■□□□□ 0.93
SSR4-205ENST00000447375 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.93
SSR4-205ENST00000447375 TTC37Q6PGP7 1564 aa20.83■□□□□ 0.92
SSR4-205ENST00000447375 SIGLEC1Q9BZZ2 1709 aa20.83■□□□□ 0.92
SSR4-205ENST00000447375 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.92
SSR4-205ENST00000447375 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
SSR4-205ENST00000447375 ZMYM4Q5VZL5 1548 aa20.82■□□□□ 0.92
SSR4-205ENST00000447375 FER1L4A9Z1Z3 1794 aa20.81■□□□□ 0.92
SSR4-205ENST00000447375 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
SSR4-205ENST00000447375 PREX1Q8TCU6 1659 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms