RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 CUL7Q14999 1698 aa26.88■■□□□ 1.89
HMGB2-203ENST00000446922 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
HMGB2-203ENST00000446922 PRG4Q92954 1404 aaPredicted RBP26.84■■□□□ 1.89
HMGB2-203ENST00000446922 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
HMGB2-203ENST00000446922 KIAA0586Q9BVV6 1533 aa26.8■■□□□ 1.88
HMGB2-203ENST00000446922 CARMIL1Q5VZK9 1371 aa26.78■■□□□ 1.88
HMGB2-203ENST00000446922 NPM1P06748 294 aaKnown RBP eCLIP26.57■■□□□ 1.847e-7■■□□□ 14.1
HMGB2-203ENST00000446922 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
HMGB2-203ENST00000446922 CARMIL2Q6F5E8 1435 aa26.55■■□□□ 1.84
HMGB2-203ENST00000446922 IQGAP2Q13576 1575 aa26.51■■□□□ 1.83
HMGB2-203ENST00000446922 PTPRGP23470 1445 aa26.49■■□□□ 1.83
HMGB2-203ENST00000446922 TNIKQ9UKE5 1360 aa26.48■■□□□ 1.83
HMGB2-203ENST00000446922 MAPKBP1O60336 1514 aa26.45■■□□□ 1.83
HMGB2-203ENST00000446922 ADCY10Q96PN6 1610 aa26.45■■□□□ 1.82
HMGB2-203ENST00000446922 UGGT2Q9NYU1 1516 aa26.4■■□□□ 1.82
HMGB2-203ENST00000446922 ABCC10Q5T3U5 1492 aa26.4■■□□□ 1.82
HMGB2-203ENST00000446922 KIF13AQ9H1H9 1805 aa26.37■■□□□ 1.81
HMGB2-203ENST00000446922 DISP1Q96F81 1524 aa26.37■■□□□ 1.81
HMGB2-203ENST00000446922 PRXQ9BXM0 1461 aa26.36■■□□□ 1.81
HMGB2-203ENST00000446922 FAM69CQ0P6D2 419 aa26.35■■□□□ 1.81
HMGB2-203ENST00000446922 UHRF1BP1LA0JNW5 1464 aa26.33■■□□□ 1.81
HMGB2-203ENST00000446922 ABCC2Q92887 1545 aa26.3■■□□□ 1.8
HMGB2-203ENST00000446922 UACAQ9BZF9 1416 aa26.3■■□□□ 1.8
HMGB2-203ENST00000446922 DIP2BQ9P265 1576 aa26.27■■□□□ 1.8
HMGB2-203ENST00000446922 CTTNBP2Q8WZ74 1663 aa26.26■■□□□ 1.79
HMGB2-203ENST00000446922 TTBK1Q5TCY1 1321 aaPredicted RBP26.26■■□□□ 1.79
HMGB2-203ENST00000446922 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
HMGB2-203ENST00000446922 KIAA0556O60303 1618 aa26.25■■□□□ 1.79
HMGB2-203ENST00000446922 CSRNP3Q8WYN3 585 aa26.24■■□□□ 1.79
HMGB2-203ENST00000446922 EEA1Q15075 1411 aa26.22■■□□□ 1.79
HMGB2-203ENST00000446922 PLB1Q6P1J6 1458 aa26.22■■□□□ 1.79
HMGB2-203ENST00000446922 KDM5BQ9UGL1 1544 aa26.19■■□□□ 1.78
HMGB2-203ENST00000446922 ASXL2Q76L83 1435 aa26.16■■□□□ 1.78
HMGB2-203ENST00000446922 FAM9AQ8IZU1 332 aaPredicted RBP26.12■■□□□ 1.77
HMGB2-203ENST00000446922 GLI2P10070 1586 aa26.12■■□□□ 1.77
HMGB2-203ENST00000446922 ZCCHC11Q5TAX3 1644 aaKnown RBP26.04■■□□□ 1.76
HMGB2-203ENST00000446922 ABCA8O94911 1581 aa26.03■■□□□ 1.76
HMGB2-203ENST00000446922 EPRSP07814 1512 aaKnown RBP26.02■■□□□ 1.76
HMGB2-203ENST00000446922 TSPOAP1O95153 1857 aa25.99■■□□□ 1.75
HMGB2-203ENST00000446922 KDM6BO15054 1643 aa25.99■■□□□ 1.75
HMGB2-203ENST00000446922 WDR7Q9Y4E6 1490 aa25.96■■□□□ 1.75
HMGB2-203ENST00000446922 SAMD9Q5K651 1589 aa25.93■■□□□ 1.74
HMGB2-203ENST00000446922 MAP3K4Q9Y6R4 1608 aa25.92■■□□□ 1.74
HMGB2-203ENST00000446922 TEX14Q8IWB6 1497 aa25.91■■□□□ 1.74
HMGB2-203ENST00000446922 PPRC1Q5VV67 1664 aaKnown RBP25.9■■□□□ 1.74
HMGB2-203ENST00000446922 P3H3Q8IVL6 736 aa25.9■■□□□ 1.74
HMGB2-203ENST00000446922 KIF21BO75037 1637 aa25.89■■□□□ 1.74
HMGB2-203ENST00000446922 ATP10BO94823 1461 aa25.83■■□□□ 1.73
HMGB2-203ENST00000446922 MAGI3Q5TCQ9 1506 aa25.8■■□□□ 1.72
HMGB2-203ENST00000446922 KCNH8Q96L42 1107 aa25.8■■□□□ 1.72
HMGB2-203ENST00000446922 CD109Q6YHK3 1445 aa25.8■■□□□ 1.72
HMGB2-203ENST00000446922 CFAP43Q8NDM7 1665 aa25.79■■□□□ 1.72
HMGB2-203ENST00000446922 RAPGEF6Q8TEU7 1601 aa25.77■■□□□ 1.72
HMGB2-203ENST00000446922 EFCAB5A4FU69 1503 aa25.77■■□□□ 1.72
HMGB2-203ENST00000446922 COL17A1Q9UMD9 1497 aaPredicted RBP25.72■■□□□ 1.71
HMGB2-203ENST00000446922 FHOD3Q2V2M9 1422 aa25.71■■□□□ 1.71
HMGB2-203ENST00000446922 UBTFP17480 764 aaKnown RBP25.69■■□□□ 1.7
HMGB2-203ENST00000446922 RANGAP1P46060 587 aaPredicted RBP25.69■■□□□ 1.7
HMGB2-203ENST00000446922 NUP153P49790 1475 aaKnown RBP25.68■■□□□ 1.7
HMGB2-203ENST00000446922 PHLDB1Q86UU1 1377 aa25.68■■□□□ 1.7
HMGB2-203ENST00000446922 ARID3CA6NKF2 412 aa25.67■■□□□ 1.7
HMGB2-203ENST00000446922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
HMGB2-203ENST00000446922 HNRNPUL2Q1KMD3 747 aaKnown RBP25.65■■□□□ 1.7
HMGB2-203ENST00000446922 ABCA9Q8IUA7 1624 aa25.64■■□□□ 1.7
HMGB2-203ENST00000446922 KDM4FA0A1W2PPD8 638 aa25.64■■□□□ 1.7
HMGB2-203ENST00000446922 PLEKHD1A6NEE1 506 aa25.62■■□□□ 1.69
HMGB2-203ENST00000446922 ARAP3Q8WWN8 1544 aa25.59■■□□□ 1.69
HMGB2-203ENST00000446922 FMN1Q68DA7 1419 aa25.57■■□□□ 1.68
HMGB2-203ENST00000446922 NEO1Q92859 1461 aa25.53■■□□□ 1.68
HMGB2-203ENST00000446922 ARHGAP35Q9NRY4 1499 aa25.52■■□□□ 1.68
HMGB2-203ENST00000446922 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
HMGB2-203ENST00000446922 ADGRL1O94910 1474 aa25.46■■□□□ 1.67
HMGB2-203ENST00000446922 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.66
HMGB2-203ENST00000446922 HECW1Q76N89 1606 aa25.42■■□□□ 1.66
HMGB2-203ENST00000446922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.4■■□□□ 1.666e-13■■■□□ 15.1
HMGB2-203ENST00000446922 CDK13Q14004 1512 aaKnown RBP25.39■■□□□ 1.66
HMGB2-203ENST00000446922 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
HMGB2-203ENST00000446922 CFAP74Q9C0B2 1584 aa25.37■■□□□ 1.65
HMGB2-203ENST00000446922 RAPGEF3O95398 923 aa25.36■■□□□ 1.65
HMGB2-203ENST00000446922 AKNAQ7Z591 1439 aa25.35■■□□□ 1.65
HMGB2-203ENST00000446922 FANCAO15360 1455 aa25.34■■□□□ 1.65
HMGB2-203ENST00000446922 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
HMGB2-203ENST00000446922 PLCH2O75038 1416 aa25.32■■□□□ 1.64
HMGB2-203ENST00000446922 TTC37Q6PGP7 1564 aa25.31■■□□□ 1.64
HMGB2-203ENST00000446922 TROQ12816 1431 aaPredicted RBP25.29■■□□□ 1.64
HMGB2-203ENST00000446922 CASKIN1Q8WXD9 1431 aa25.29■■□□□ 1.64
HMGB2-203ENST00000446922 FRMPD1Q5SYB0 1578 aa25.27■■□□□ 1.64
HMGB2-203ENST00000446922 CLIP1P30622 1438 aa25.27■■□□□ 1.64
HMGB2-203ENST00000446922 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
HMGB2-203ENST00000446922 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
HMGB2-203ENST00000446922 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
HMGB2-203ENST00000446922 KIF14Q15058 1648 aa25.22■■□□□ 1.63
HMGB2-203ENST00000446922 MAGI2Q86UL8 1455 aa25.21■■□□□ 1.63
HMGB2-203ENST00000446922 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
HMGB2-203ENST00000446922 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
HMGB2-203ENST00000446922 MYO5CQ9NQX4 1742 aa25.18■■□□□ 1.62
HMGB2-203ENST00000446922 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
HMGB2-203ENST00000446922 LRRIQ1Q96JM4 1722 aa25.17■■□□□ 1.62
HMGB2-203ENST00000446922 PCF11O94913 1555 aaKnown RBP25.16■■□□□ 1.62
HMGB2-203ENST00000446922 ARHGEF40Q8TER5 1519 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 1062.4 ms