RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 CUX1P39880 1505 aa18.29■□□□□ 0.52
UBE2D4-206ENST00000446008 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
UBE2D4-206ENST00000446008 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
UBE2D4-206ENST00000446008 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
UBE2D4-206ENST00000446008 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
UBE2D4-206ENST00000446008 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.49
UBE2D4-206ENST00000446008 GRIN2AQ12879 1464 aa18.08■□□□□ 0.49
UBE2D4-206ENST00000446008 NUP160Q12769 1436 aa18.06■□□□□ 0.48
UBE2D4-206ENST00000446008 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
UBE2D4-206ENST00000446008 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
UBE2D4-206ENST00000446008 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
UBE2D4-206ENST00000446008 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
UBE2D4-206ENST00000446008 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
UBE2D4-206ENST00000446008 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
UBE2D4-206ENST00000446008 KIF13AQ9H1H9 1805 aa17.98■□□□□ 0.47
UBE2D4-206ENST00000446008 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
UBE2D4-206ENST00000446008 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
UBE2D4-206ENST00000446008 BIVM-ERCC5R4GMW8 1640 aa17.92■□□□□ 0.46
UBE2D4-206ENST00000446008 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.46
UBE2D4-206ENST00000446008 JPH4Q96JJ6 628 aa17.89■□□□□ 0.45
UBE2D4-206ENST00000446008 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
UBE2D4-206ENST00000446008 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
UBE2D4-206ENST00000446008 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE2D4-206ENST00000446008 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
UBE2D4-206ENST00000446008 SUPT5HO00267 1087 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-206ENST00000446008 DIP2BQ9P265 1576 aa17.77■□□□□ 0.44
UBE2D4-206ENST00000446008 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.43
UBE2D4-206ENST00000446008 ADCY10Q96PN6 1610 aa17.73■□□□□ 0.43
UBE2D4-206ENST00000446008 KDM4FA0A1W2PPD8 638 aa17.72■□□□□ 0.43
UBE2D4-206ENST00000446008 KDM6BO15054 1643 aa17.69■□□□□ 0.42
UBE2D4-206ENST00000446008 KIAA0586Q9BVV6 1533 aa17.68■□□□□ 0.42
UBE2D4-206ENST00000446008 TSPOAP1O95153 1857 aa17.66■□□□□ 0.42
UBE2D4-206ENST00000446008 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
UBE2D4-206ENST00000446008 IGF1RP08069 1367 aa17.62■□□□□ 0.41
UBE2D4-206ENST00000446008 CUL7Q14999 1698 aa17.58■□□□□ 0.41
UBE2D4-206ENST00000446008 PTPRGP23470 1445 aa17.57■□□□□ 0.4
UBE2D4-206ENST00000446008 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
UBE2D4-206ENST00000446008 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
UBE2D4-206ENST00000446008 ILDR1Q86SU0 546 aaPredicted RBP17.53■□□□□ 0.4
UBE2D4-206ENST00000446008 GLI2P10070 1586 aa17.53■□□□□ 0.4
UBE2D4-206ENST00000446008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
UBE2D4-206ENST00000446008 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.39
UBE2D4-206ENST00000446008 PPRC1Q5VV67 1664 aaKnown RBP17.52■□□□□ 0.39
UBE2D4-206ENST00000446008 PLB1Q6P1J6 1458 aa17.51■□□□□ 0.39
UBE2D4-206ENST00000446008 CARMIL2Q6F5E8 1435 aa17.51■□□□□ 0.39
UBE2D4-206ENST00000446008 ASXL2Q76L83 1435 aa17.5■□□□□ 0.39
UBE2D4-206ENST00000446008 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
UBE2D4-206ENST00000446008 UHRF1BP1LA0JNW5 1464 aa17.48■□□□□ 0.39
UBE2D4-206ENST00000446008 ADGRL1O94910 1474 aa17.45■□□□□ 0.38
UBE2D4-206ENST00000446008 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
UBE2D4-206ENST00000446008 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
UBE2D4-206ENST00000446008 IQGAP2Q13576 1575 aa17.43■□□□□ 0.38
UBE2D4-206ENST00000446008 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
UBE2D4-206ENST00000446008 MAP3K4Q9Y6R4 1608 aa17.4■□□□□ 0.38
UBE2D4-206ENST00000446008 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
UBE2D4-206ENST00000446008 KDM5BQ9UGL1 1544 aa17.4■□□□□ 0.38
UBE2D4-206ENST00000446008 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
UBE2D4-206ENST00000446008 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
UBE2D4-206ENST00000446008 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
UBE2D4-206ENST00000446008 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
UBE2D4-206ENST00000446008 ZCCHC11Q5TAX3 1644 aaKnown RBP17.33■□□□□ 0.37
UBE2D4-206ENST00000446008 UGGT2Q9NYU1 1516 aa17.33■□□□□ 0.37
UBE2D4-206ENST00000446008 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
UBE2D4-206ENST00000446008 KIAA0556O60303 1618 aa17.28■□□□□ 0.36
UBE2D4-206ENST00000446008 WDR7Q9Y4E6 1490 aa17.27■□□□□ 0.36
UBE2D4-206ENST00000446008 RAPGEF2Q9Y4G8 1499 aa17.27■□□□□ 0.36
UBE2D4-206ENST00000446008 MAGI3Q5TCQ9 1506 aa17.24■□□□□ 0.35
UBE2D4-206ENST00000446008 CFAP43Q8NDM7 1665 aa17.22■□□□□ 0.35
UBE2D4-206ENST00000446008 CD109Q6YHK3 1445 aa17.21■□□□□ 0.35
UBE2D4-206ENST00000446008 U3KPZ7 1027 aaPredicted RBP17.18■□□□□ 0.34
UBE2D4-206ENST00000446008 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
UBE2D4-206ENST00000446008 KCNH8Q96L42 1107 aa17.16■□□□□ 0.34
UBE2D4-206ENST00000446008 ABCA8O94911 1581 aa17.15■□□□□ 0.34
UBE2D4-206ENST00000446008 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
UBE2D4-206ENST00000446008 CTTNBP2Q8WZ74 1663 aa17.15■□□□□ 0.34
UBE2D4-206ENST00000446008 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
UBE2D4-206ENST00000446008 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
UBE2D4-206ENST00000446008 KIF21BO75037 1637 aa17.11■□□□□ 0.33
UBE2D4-206ENST00000446008 FBXO41Q8TF61 875 aa17.11■□□□□ 0.33
UBE2D4-206ENST00000446008 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
UBE2D4-206ENST00000446008 PHLDB1Q86UU1 1377 aa17.07■□□□□ 0.32
UBE2D4-206ENST00000446008 ADAMTSL3P82987 1691 aa17.04■□□□□ 0.32
UBE2D4-206ENST00000446008 PTPRMP28827 1452 aa17.03■□□□□ 0.32
UBE2D4-206ENST00000446008 ATP10BO94823 1461 aa17.02■□□□□ 0.32
UBE2D4-206ENST00000446008 ZBTB22O15209 634 aa17.02■□□□□ 0.32
UBE2D4-206ENST00000446008 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
UBE2D4-206ENST00000446008 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
UBE2D4-206ENST00000446008 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
UBE2D4-206ENST00000446008 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
UBE2D4-206ENST00000446008 NEO1Q92859 1461 aa16.97■□□□□ 0.31
UBE2D4-206ENST00000446008 BCORL1Q5H9F3 1711 aa16.96■□□□□ 0.31
UBE2D4-206ENST00000446008 RAPGEF3O95398 923 aa16.96■□□□□ 0.31
UBE2D4-206ENST00000446008 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
UBE2D4-206ENST00000446008 PCF11O94913 1555 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-206ENST00000446008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-206ENST00000446008 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-206ENST00000446008 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
UBE2D4-206ENST00000446008 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
UBE2D4-206ENST00000446008 FRMPD1Q5SYB0 1578 aa16.91■□□□□ 0.3
UBE2D4-206ENST00000446008 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms