RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PRG4Q92954 1404 aaPredicted RBP40.45■■■■■ 4.07
C9orf3-207ENST00000445181 RUSC2Q8N2Y8 1516 aa40.42■■■■■ 4.06
C9orf3-207ENST00000445181 CARMIL1Q5VZK9 1371 aa40.39■■■■■ 4.06
C9orf3-207ENST00000445181 KIAA0586Q9BVV6 1533 aa40.32■■■■■ 4.05
C9orf3-207ENST00000445181 CHIC1Q5VXU3 224 aa40.23■■■■■ 4.03
C9orf3-207ENST00000445181 RAPGEF2Q9Y4G8 1499 aa40.08■■■■■ 4.01
C9orf3-207ENST00000445181 IQGAP2Q13576 1575 aa39.97■■■■□ 3.99
C9orf3-207ENST00000445181 EEA1Q15075 1411 aa39.97■■■■□ 3.99
C9orf3-207ENST00000445181 CSRNP3Q8WYN3 585 aa39.95■■■■□ 3.99
C9orf3-207ENST00000445181 NPM1P06748 294 aaKnown RBP eCLIP39.94■■■■□ 3.98
C9orf3-207ENST00000445181 CARMIL2Q6F5E8 1435 aa39.93■■■■□ 3.98
C9orf3-207ENST00000445181 FAM9AQ8IZU1 332 aaPredicted RBP39.92■■■■□ 3.98
C9orf3-207ENST00000445181 PTPRGP23470 1445 aa39.91■■■■□ 3.98
C9orf3-207ENST00000445181 PRXQ9BXM0 1461 aa39.9■■■■□ 3.98
C9orf3-207ENST00000445181 TTBK1Q5TCY1 1321 aaPredicted RBP39.88■■■■□ 3.97
C9orf3-207ENST00000445181 ADCY10Q96PN6 1610 aa39.87■■■■□ 3.97
C9orf3-207ENST00000445181 TNIKQ9UKE5 1360 aa39.84■■■■□ 3.97
C9orf3-207ENST00000445181 DISP1Q96F81 1524 aa39.76■■■■□ 3.96
C9orf3-207ENST00000445181 UGGT2Q9NYU1 1516 aa39.75■■■■□ 3.95
C9orf3-207ENST00000445181 MAPKBP1O60336 1514 aa39.73■■■■□ 3.95
C9orf3-207ENST00000445181 KIF13AQ9H1H9 1805 aa39.7■■■■□ 3.95
C9orf3-207ENST00000445181 CTTNBP2Q8WZ74 1663 aa39.68■■■■□ 3.94
C9orf3-207ENST00000445181 FAM69CQ0P6D2 419 aa39.68■■■■□ 3.94
C9orf3-207ENST00000445181 ABCC10Q5T3U5 1492 aa39.67■■■■□ 3.94
C9orf3-207ENST00000445181 KIAA0556O60303 1618 aa39.6■■■■□ 3.93
C9orf3-207ENST00000445181 UACAQ9BZF9 1416 aa39.59■■■■□ 3.93
C9orf3-207ENST00000445181 ABCC2Q92887 1545 aa39.58■■■■□ 3.93
C9orf3-207ENST00000445181 UHRF1BP1LA0JNW5 1464 aa39.56■■■■□ 3.92
C9orf3-207ENST00000445181 DIP2BQ9P265 1576 aa39.55■■■■□ 3.92
C9orf3-207ENST00000445181 KIF21BO75037 1637 aa39.54■■■■□ 3.92
C9orf3-207ENST00000445181 GOLGA3Q08378 1498 aa39.49■■■■□ 3.91
C9orf3-207ENST00000445181 EHMT2Q96KQ7 1210 aa39.45■■■■□ 3.91
C9orf3-207ENST00000445181 ASXL2Q76L83 1435 aa39.42■■■■□ 3.9
C9orf3-207ENST00000445181 PLB1Q6P1J6 1458 aa39.39■■■■□ 3.9
C9orf3-207ENST00000445181 KDM5BQ9UGL1 1544 aa39.38■■■■□ 3.89
C9orf3-207ENST00000445181 UBTFP17480 764 aaKnown RBP39.33■■■■□ 3.89
C9orf3-207ENST00000445181 RANGAP1P46060 587 aaPredicted RBP39.29■■■■□ 3.88
C9orf3-207ENST00000445181 ZCCHC11Q5TAX3 1644 aaKnown RBP39.28■■■■□ 3.88
C9orf3-207ENST00000445181 P3H3Q8IVL6 736 aa39.27■■■■□ 3.88
C9orf3-207ENST00000445181 TSPOAP1O95153 1857 aa39.26■■■■□ 3.88
C9orf3-207ENST00000445181 ABCA8O94911 1581 aa39.22■■■■□ 3.87
C9orf3-207ENST00000445181 GLI2P10070 1586 aa39.21■■■■□ 3.87
C9orf3-207ENST00000445181 EPRSP07814 1512 aaKnown RBP39.17■■■■□ 3.86
C9orf3-207ENST00000445181 SAMD9Q5K651 1589 aa39.15■■■■□ 3.86
C9orf3-207ENST00000445181 KDM6BO15054 1643 aa39.1■■■■□ 3.85
C9orf3-207ENST00000445181 WDR7Q9Y4E6 1490 aa39.1■■■■□ 3.85
C9orf3-207ENST00000445181 PPRC1Q5VV67 1664 aaKnown RBP39.03■■■■□ 3.84
C9orf3-207ENST00000445181 AEBP2Q6ZN18 517 aaPredicted RBP39.02■■■■□ 3.84
C9orf3-207ENST00000445181 EFCAB5A4FU69 1503 aa39.02■■■■□ 3.84
C9orf3-207ENST00000445181 ARID3CA6NKF2 412 aa39.01■■■■□ 3.84
C9orf3-207ENST00000445181 MAP3K4Q9Y6R4 1608 aa39■■■■□ 3.83
C9orf3-207ENST00000445181 KCNH8Q96L42 1107 aa38.99■■■■□ 3.83
C9orf3-207ENST00000445181 FHOD3Q2V2M9 1422 aa38.98■■■■□ 3.83
C9orf3-207ENST00000445181 ATP10BO94823 1461 aa38.94■■■■□ 3.82
C9orf3-207ENST00000445181 TEX14Q8IWB6 1497 aa38.9■■■■□ 3.82
C9orf3-207ENST00000445181 RAPGEF6Q8TEU7 1601 aa38.89■■■■□ 3.82
C9orf3-207ENST00000445181 CD109Q6YHK3 1445 aa38.84■■■■□ 3.81
C9orf3-207ENST00000445181 ARHGAP35Q9NRY4 1499 aa38.82■■■■□ 3.81
C9orf3-207ENST00000445181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.8■■■■□ 3.8
C9orf3-207ENST00000445181 HNRNPUL2Q1KMD3 747 aaKnown RBP38.8■■■■□ 3.8
C9orf3-207ENST00000445181 COL17A1Q9UMD9 1497 aaPredicted RBP38.79■■■■□ 3.8
C9orf3-207ENST00000445181 CFAP43Q8NDM7 1665 aa38.78■■■■□ 3.8
C9orf3-207ENST00000445181 NUP153P49790 1475 aaKnown RBP38.77■■■■□ 3.8
C9orf3-207ENST00000445181 MAGI3Q5TCQ9 1506 aa38.75■■■■□ 3.79
C9orf3-207ENST00000445181 FMN1Q68DA7 1419 aa38.68■■■■□ 3.78
C9orf3-207ENST00000445181 CLIP1P30622 1438 aa38.65■■■■□ 3.78
C9orf3-207ENST00000445181 LOC105371045A0A1W2PR82 267 aa38.62■■■■□ 3.77
C9orf3-207ENST00000445181 PLEKHD1A6NEE1 506 aa38.59■■■■□ 3.77
C9orf3-207ENST00000445181 ATP1B4Q9UN42 357 aaPredicted RBP38.59■■■■□ 3.77
C9orf3-207ENST00000445181 ABCA9Q8IUA7 1624 aa38.59■■■■□ 3.77
C9orf3-207ENST00000445181 KDM4FA0A1W2PPD8 638 aa38.57■■■■□ 3.76
C9orf3-207ENST00000445181 CEP162Q5TB80 1403 aa38.49■■■■□ 3.75
C9orf3-207ENST00000445181 HECW1Q76N89 1606 aa38.49■■■■□ 3.75
C9orf3-207ENST00000445181 PHLDB1Q86UU1 1377 aa38.44■■■■□ 3.74
C9orf3-207ENST00000445181 ARAP3Q8WWN8 1544 aa38.44■■■■□ 3.74
C9orf3-207ENST00000445181 CDK13Q14004 1512 aaKnown RBP38.43■■■■□ 3.74
C9orf3-207ENST00000445181 NEO1Q92859 1461 aa38.37■■■■□ 3.73
C9orf3-207ENST00000445181 CASKIN1Q8WXD9 1431 aa38.37■■■■□ 3.73
C9orf3-207ENST00000445181 PCF11O94913 1555 aaKnown RBP38.36■■■■□ 3.73
C9orf3-207ENST00000445181 ADGRL1O94910 1474 aa38.34■■■■□ 3.73
C9orf3-207ENST00000445181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.33■■■■□ 3.73
C9orf3-207ENST00000445181 RAPGEF3O95398 923 aa38.29■■■■□ 3.72
C9orf3-207ENST00000445181 FYCO1Q9BQS8 1478 aa38.28■■■■□ 3.72
C9orf3-207ENST00000445181 CDK11AQ9UQ88 783 aaPredicted RBP38.28■■■■□ 3.72
C9orf3-207ENST00000445181 TTC37Q6PGP7 1564 aa38.24■■■■□ 3.71
C9orf3-207ENST00000445181 LRRIQ1Q96JM4 1722 aa38.24■■■■□ 3.71
C9orf3-207ENST00000445181 CCDC18Q5T9S5 1454 aa38.23■■■■□ 3.71
C9orf3-207ENST00000445181 FANCAO15360 1455 aa38.2■■■■□ 3.71
C9orf3-207ENST00000445181 AKNAQ7Z591 1439 aa38.19■■■■□ 3.7
C9orf3-207ENST00000445181 CFAP74Q9C0B2 1584 aa38.14■■■■□ 3.7
C9orf3-207ENST00000445181 DENND4BO75064 1496 aaPredicted RBP38.13■■■■□ 3.69
C9orf3-207ENST00000445181 PLCH2O75038 1416 aa38.12■■■■□ 3.69
C9orf3-207ENST00000445181 TROQ12816 1431 aaPredicted RBP38.12■■■■□ 3.69
C9orf3-207ENST00000445181 FRMPD1Q5SYB0 1578 aa38.11■■■■□ 3.69
C9orf3-207ENST00000445181 KIF14Q15058 1648 aa38.05■■■■□ 3.68
C9orf3-207ENST00000445181 EFCAB2Q5VUJ9 269 aa38.01■■■■□ 3.68
C9orf3-207ENST00000445181 VPS8Q8N3P4 1428 aa38.01■■■■□ 3.68
C9orf3-207ENST00000445181 RICTORQ6R327 1708 aa38.01■■■■□ 3.67
C9orf3-207ENST00000445181 MYO5CQ9NQX4 1742 aa37.98■■■■□ 3.67
C9orf3-207ENST00000445181 SCAPERQ9BY12 1400 aa37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms