RNA–Protein interactions for RNA: ENST00000445177.5

SIK3-204, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 5

Gene SIK3, Length 6,331 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-204ENST00000445177 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
SIK3-204ENST00000445177 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
SIK3-204ENST00000445177 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
SIK3-204ENST00000445177 TSPY4P0CV99 314 aa18.23■□□□□ 0.51
SIK3-204ENST00000445177 TSPY10P0CW01 314 aa18.23■□□□□ 0.51
SIK3-204ENST00000445177 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
SIK3-204ENST00000445177 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
SIK3-204ENST00000445177 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
SIK3-204ENST00000445177 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
SIK3-204ENST00000445177 RGL3Q3MIN7 710 aa18.19■□□□□ 0.5
SIK3-204ENST00000445177 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
SIK3-204ENST00000445177 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
SIK3-204ENST00000445177 MYT1Q01538 1121 aa18.16■□□□□ 0.5
SIK3-204ENST00000445177 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
SIK3-204ENST00000445177 PLEKHD1A6NEE1 506 aa18.15■□□□□ 0.5
SIK3-204ENST00000445177 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
SIK3-204ENST00000445177 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
SIK3-204ENST00000445177 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
SIK3-204ENST00000445177 SMARCA2P51531 1590 aa18.12■□□□□ 0.49
SIK3-204ENST00000445177 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
SIK3-204ENST00000445177 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
SIK3-204ENST00000445177 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
SIK3-204ENST00000445177 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
SIK3-204ENST00000445177 FOXD1Q16676 465 aa18.05■□□□□ 0.48
SIK3-204ENST00000445177 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
SIK3-204ENST00000445177 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
SIK3-204ENST00000445177 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
SIK3-204ENST00000445177 EIF4G2P78344 907 aaKnown RBP eCLIP18.02■□□□□ 0.48
SIK3-204ENST00000445177 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
SIK3-204ENST00000445177 VPS8Q8N3P4 1428 aa18■□□□□ 0.47
SIK3-204ENST00000445177 RTL5Q5HYW3 569 aaPredicted RBP17.97■□□□□ 0.47
SIK3-204ENST00000445177 FHOD3Q2V2M9 1422 aa17.93■□□□□ 0.46
SIK3-204ENST00000445177 NEFMP07197 916 aa17.93■□□□□ 0.46
SIK3-204ENST00000445177 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
SIK3-204ENST00000445177 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
SIK3-204ENST00000445177 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
SIK3-204ENST00000445177 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
SIK3-204ENST00000445177 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
SIK3-204ENST00000445177 ARHGAP35Q9NRY4 1499 aa17.85■□□□□ 0.45
SIK3-204ENST00000445177 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
SIK3-204ENST00000445177 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.44
SIK3-204ENST00000445177 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
SIK3-204ENST00000445177 DCAF11Q8TEB1 546 aa17.81■□□□□ 0.44
SIK3-204ENST00000445177 ZBTB7CA1YPR0 619 aa17.8■□□□□ 0.44
SIK3-204ENST00000445177 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
SIK3-204ENST00000445177 ARID4BQ4LE39 1312 aaPredicted RBP17.8■□□□□ 0.44
SIK3-204ENST00000445177 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
SIK3-204ENST00000445177 TNNT2P45379 298 aaPredicted RBP17.78■□□□□ 0.44
SIK3-204ENST00000445177 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
SIK3-204ENST00000445177 SUPT16HQ9Y5B9 1047 aaKnown RBP17.77■□□□□ 0.44
SIK3-204ENST00000445177 RAD54L2Q9Y4B4 1467 aa17.77■□□□□ 0.43
SIK3-204ENST00000445177 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.43
SIK3-204ENST00000445177 MLECQ14165 292 aa17.75■□□□□ 0.43
SIK3-204ENST00000445177 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
SIK3-204ENST00000445177 PKD2Q13563 968 aa17.73■□□□□ 0.43
SIK3-204ENST00000445177 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
SIK3-204ENST00000445177 HNRNPMP52272 730 aaKnown RBP eCLIP17.72■□□□□ 0.439e-7■■■■■ 27.5
SIK3-204ENST00000445177 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
SIK3-204ENST00000445177 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
SIK3-204ENST00000445177 C14orf37Q86TY3 774 aa17.71■□□□□ 0.43
SIK3-204ENST00000445177 SAFB2Q14151 953 aaKnown RBP eCLIP17.69■□□□□ 0.42
SIK3-204ENST00000445177 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
SIK3-204ENST00000445177 MPHOSPH9Q99550 1183 aa17.68■□□□□ 0.42
SIK3-204ENST00000445177 FMN1Q68DA7 1419 aa17.66■□□□□ 0.42
SIK3-204ENST00000445177 GGT6Q6P531 493 aa17.66■□□□□ 0.42
SIK3-204ENST00000445177 KNSTRNQ9Y448 316 aa17.66■□□□□ 0.42
SIK3-204ENST00000445177 NBR1Q14596 966 aa17.64■□□□□ 0.42
SIK3-204ENST00000445177 IGF1RP08069 1367 aa17.61■□□□□ 0.41
SIK3-204ENST00000445177 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
SIK3-204ENST00000445177 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
SIK3-204ENST00000445177 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
SIK3-204ENST00000445177 NESP48681 1621 aa17.6■□□□□ 0.41
SIK3-204ENST00000445177 NUTM2DQ5VT03 806 aaPredicted RBP17.6■□□□□ 0.41
SIK3-204ENST00000445177 NUP155O75694 1391 aa17.59■□□□□ 0.41
SIK3-204ENST00000445177 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.46e-6■■■■□ 25.1
SIK3-204ENST00000445177 STK26Q9P289 416 aa17.56■□□□□ 0.4
SIK3-204ENST00000445177 L3MBTL2Q969R5 705 aa17.56■□□□□ 0.4
SIK3-204ENST00000445177 POGKQ9P215 609 aa17.55■□□□□ 0.4
SIK3-204ENST00000445177 LAS1LQ9Y4W2 734 aaKnown RBP17.55■□□□□ 0.4
SIK3-204ENST00000445177 A0A0G2JS52 829 aa17.55■□□□□ 0.4
SIK3-204ENST00000445177 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
SIK3-204ENST00000445177 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
SIK3-204ENST00000445177 SOX12O15370 315 aa17.54■□□□□ 0.4
SIK3-204ENST00000445177 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
SIK3-204ENST00000445177 ARXQ96QS3 562 aa17.52■□□□□ 0.4
SIK3-204ENST00000445177 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
SIK3-204ENST00000445177 KIF21BO75037 1637 aa17.51■□□□□ 0.39
SIK3-204ENST00000445177 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
SIK3-204ENST00000445177 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
SIK3-204ENST00000445177 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
SIK3-204ENST00000445177 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
SIK3-204ENST00000445177 KIF3BO15066 747 aa17.48■□□□□ 0.39
SIK3-204ENST00000445177 TMF1P82094 1093 aa17.48■□□□□ 0.39
SIK3-204ENST00000445177 ROCK2O75116 1388 aaKnown RBP17.47■□□□□ 0.39
SIK3-204ENST00000445177 U2SURPO15042 1029 aaKnown RBP17.47■□□□□ 0.39
SIK3-204ENST00000445177 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
SIK3-204ENST00000445177 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
SIK3-204ENST00000445177 FRAT1Q92837 279 aaPredicted RBP17.46■□□□□ 0.39
SIK3-204ENST00000445177 KANK1Q14678 1352 aa17.46■□□□□ 0.39
SIK3-204ENST00000445177 ANKRD30AQ9BXX3 1397 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms