RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 RUSC2Q8N2Y8 1516 aa26.94■■□□□ 1.9
SEC13-213ENST00000445064 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
SEC13-213ENST00000445064 CUL7Q14999 1698 aa26.85■■□□□ 1.89
SEC13-213ENST00000445064 NPM1P06748 294 aaKnown RBP eCLIP26.81■■□□□ 1.88
SEC13-213ENST00000445064 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
SEC13-213ENST00000445064 KIF13AQ9H1H9 1805 aa26.75■■□□□ 1.87
SEC13-213ENST00000445064 FAM69CQ0P6D2 419 aa26.72■■□□□ 1.87
SEC13-213ENST00000445064 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
SEC13-213ENST00000445064 ADCY10Q96PN6 1610 aa26.71■■□□□ 1.87
SEC13-213ENST00000445064 TTBK1Q5TCY1 1321 aaPredicted RBP26.69■■□□□ 1.86
SEC13-213ENST00000445064 ABCC10Q5T3U5 1492 aa26.66■■□□□ 1.86
SEC13-213ENST00000445064 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
SEC13-213ENST00000445064 PTPRGP23470 1445 aa26.65■■□□□ 1.86
SEC13-213ENST00000445064 CARMIL2Q6F5E8 1435 aa26.6■■□□□ 1.85
SEC13-213ENST00000445064 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.84
SEC13-213ENST00000445064 IQGAP2Q13576 1575 aa26.57■■□□□ 1.84
SEC13-213ENST00000445064 DIP2BQ9P265 1576 aa26.57■■□□□ 1.84
SEC13-213ENST00000445064 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
SEC13-213ENST00000445064 DISP1Q96F81 1524 aa26.48■■□□□ 1.83
SEC13-213ENST00000445064 ABCC2Q92887 1545 aa26.45■■□□□ 1.83
SEC13-213ENST00000445064 TSPOAP1O95153 1857 aa26.43■■□□□ 1.82
SEC13-213ENST00000445064 UACAQ9BZF9 1416 aa26.42■■□□□ 1.82
SEC13-213ENST00000445064 UGGT2Q9NYU1 1516 aa26.4■■□□□ 1.82
SEC13-213ENST00000445064 UHRF1BP1LA0JNW5 1464 aa26.4■■□□□ 1.82
SEC13-213ENST00000445064 ASXL2Q76L83 1435 aa26.39■■□□□ 1.82
SEC13-213ENST00000445064 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
SEC13-213ENST00000445064 KDM6BO15054 1643 aa26.36■■□□□ 1.81
SEC13-213ENST00000445064 KIAA0556O60303 1618 aa26.33■■□□□ 1.81
SEC13-213ENST00000445064 KDM5BQ9UGL1 1544 aa26.29■■□□□ 1.8
SEC13-213ENST00000445064 GLI2P10070 1586 aa26.27■■□□□ 1.8
SEC13-213ENST00000445064 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
SEC13-213ENST00000445064 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
SEC13-213ENST00000445064 ZCCHC11Q5TAX3 1644 aaKnown RBP26.23■■□□□ 1.79
SEC13-213ENST00000445064 EPRSP07814 1512 aaKnown RBP26.22■■□□□ 1.79
SEC13-213ENST00000445064 PPRC1Q5VV67 1664 aaKnown RBP26.22■■□□□ 1.79
SEC13-213ENST00000445064 GOLGA3Q08378 1498 aa26.2■■□□□ 1.78
SEC13-213ENST00000445064 KDM4FA0A1W2PPD8 638 aa26.18■■□□□ 1.78
SEC13-213ENST00000445064 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.77
SEC13-213ENST00000445064 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
SEC13-213ENST00000445064 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
SEC13-213ENST00000445064 KCNH8Q96L42 1107 aa26.11■■□□□ 1.77
SEC13-213ENST00000445064 COL17A1Q9UMD9 1497 aaPredicted RBP26.11■■□□□ 1.77
SEC13-213ENST00000445064 WDR7Q9Y4E6 1490 aa26.11■■□□□ 1.77
SEC13-213ENST00000445064 ABCA8O94911 1581 aa26.1■■□□□ 1.77
SEC13-213ENST00000445064 TEX14Q8IWB6 1497 aa26.06■■□□□ 1.76
SEC13-213ENST00000445064 FAM9AQ8IZU1 332 aaPredicted RBP26.04■■□□□ 1.76
SEC13-213ENST00000445064 ARID3CA6NKF2 412 aa26.03■■□□□ 1.76
SEC13-213ENST00000445064 CD109Q6YHK3 1445 aa25.99■■□□□ 1.75
SEC13-213ENST00000445064 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.74
SEC13-213ENST00000445064 ATP10BO94823 1461 aa25.94■■□□□ 1.74
SEC13-213ENST00000445064 MAGI3Q5TCQ9 1506 aa25.93■■□□□ 1.74
SEC13-213ENST00000445064 CFAP43Q8NDM7 1665 aa25.93■■□□□ 1.74
SEC13-213ENST00000445064 EEA1Q15075 1411 aa25.91■■□□□ 1.74
SEC13-213ENST00000445064 ADGRL1O94910 1474 aa25.91■■□□□ 1.74
SEC13-213ENST00000445064 SAMD9Q5K651 1589 aa25.9■■□□□ 1.74
SEC13-213ENST00000445064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.86■■□□□ 1.73
SEC13-213ENST00000445064 HNRNPUL2Q1KMD3 747 aaKnown RBP25.86■■□□□ 1.73
SEC13-213ENST00000445064 RAPGEF6Q8TEU7 1601 aa25.82■■□□□ 1.72
SEC13-213ENST00000445064 FHOD3Q2V2M9 1422 aa25.79■■□□□ 1.72
SEC13-213ENST00000445064 NUP153P49790 1475 aaKnown RBP25.74■■□□□ 1.71
SEC13-213ENST00000445064 EHMT2Q96KQ7 1210 aa25.74■■□□□ 1.71
SEC13-213ENST00000445064 ABCA9Q8IUA7 1624 aa25.74■■□□□ 1.71
SEC13-213ENST00000445064 ARAP3Q8WWN8 1544 aa25.73■■□□□ 1.71
SEC13-213ENST00000445064 KIF21BO75037 1637 aa25.7■■□□□ 1.7
SEC13-213ENST00000445064 PLEKHD1A6NEE1 506 aa25.69■■□□□ 1.7
SEC13-213ENST00000445064 RAPGEF3O95398 923 aa25.68■■□□□ 1.7
SEC13-213ENST00000445064 PHLDB1Q86UU1 1377 aa25.68■■□□□ 1.7
SEC13-213ENST00000445064 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
SEC13-213ENST00000445064 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
SEC13-213ENST00000445064 EFCAB5A4FU69 1503 aa25.63■■□□□ 1.69
SEC13-213ENST00000445064 NEO1Q92859 1461 aa25.62■■□□□ 1.69
SEC13-213ENST00000445064 ATP1B4Q9UN42 357 aaPredicted RBP25.55■■□□□ 1.68
SEC13-213ENST00000445064 HECW2Q9P2P5 1572 aa25.53■■□□□ 1.68
SEC13-213ENST00000445064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.52■■□□□ 1.684e-7■■■■□ 22.2
SEC13-213ENST00000445064 CDK13Q14004 1512 aaKnown RBP25.51■■□□□ 1.67
SEC13-213ENST00000445064 FRMPD1Q5SYB0 1578 aa25.5■■□□□ 1.67
SEC13-213ENST00000445064 AKNAQ7Z591 1439 aa25.49■■□□□ 1.67
SEC13-213ENST00000445064 FANCAO15360 1455 aa25.47■■□□□ 1.67
SEC13-213ENST00000445064 ARID4BQ4LE39 1312 aaPredicted RBP25.47■■□□□ 1.67
SEC13-213ENST00000445064 DENND4BO75064 1496 aaPredicted RBP25.47■■□□□ 1.67
SEC13-213ENST00000445064 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
SEC13-213ENST00000445064 TTC37Q6PGP7 1564 aa25.45■■□□□ 1.66
SEC13-213ENST00000445064 FMN1Q68DA7 1419 aa25.45■■□□□ 1.66
SEC13-213ENST00000445064 ADAMTSL3P82987 1691 aa25.42■■□□□ 1.66
SEC13-213ENST00000445064 RICTORQ6R327 1708 aa25.4■■□□□ 1.66
SEC13-213ENST00000445064 PTPRMP28827 1452 aa25.4■■□□□ 1.66
SEC13-213ENST00000445064 CFAP74Q9C0B2 1584 aa25.39■■□□□ 1.66
SEC13-213ENST00000445064 ILDR1Q86SU0 546 aaPredicted RBP25.39■■□□□ 1.66
SEC13-213ENST00000445064 HECW1Q76N89 1606 aa25.38■■□□□ 1.65
SEC13-213ENST00000445064 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
SEC13-213ENST00000445064 PLCH2O75038 1416 aa25.37■■□□□ 1.65
SEC13-213ENST00000445064 BCORL1Q5H9F3 1711 aa25.37■■□□□ 1.65
SEC13-213ENST00000445064 SCAPERQ9BY12 1400 aa25.34■■□□□ 1.65
SEC13-213ENST00000445064 ARHGEF40Q8TER5 1519 aa25.33■■□□□ 1.65
SEC13-213ENST00000445064 YEATS2Q9ULM3 1422 aa25.31■■□□□ 1.64
SEC13-213ENST00000445064 MADDQ8WXG6 1647 aa25.31■■□□□ 1.64
SEC13-213ENST00000445064 EFCAB2Q5VUJ9 269 aa25.31■■□□□ 1.64
SEC13-213ENST00000445064 ZMYM4Q5VZL5 1548 aa25.29■■□□□ 1.64
SEC13-213ENST00000445064 ZFYVE16Q7Z3T8 1539 aa25.27■■□□□ 1.64
SEC13-213ENST00000445064 TROQ12816 1431 aaPredicted RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms