RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
PDCD4-203ENST00000444997 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
PDCD4-203ENST00000444997 RUSC2Q8N2Y8 1516 aa29.73■■■□□ 2.35
PDCD4-203ENST00000444997 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
PDCD4-203ENST00000444997 RAPGEF2Q9Y4G8 1499 aa29.52■■■□□ 2.32
PDCD4-203ENST00000444997 NPM1P06748 294 aaKnown RBP eCLIP29.49■■■□□ 2.31
PDCD4-203ENST00000444997 CARMIL2Q6F5E8 1435 aa29.46■■■□□ 2.31
PDCD4-203ENST00000444997 IQGAP2Q13576 1575 aa29.44■■■□□ 2.3
PDCD4-203ENST00000444997 PTPRGP23470 1445 aa29.4■■■□□ 2.3
PDCD4-203ENST00000444997 TTBK1Q5TCY1 1321 aaPredicted RBP29.38■■■□□ 2.29
PDCD4-203ENST00000444997 TNIKQ9UKE5 1360 aa29.37■■■□□ 2.29
PDCD4-203ENST00000444997 ADCY10Q96PN6 1610 aa29.31■■■□□ 2.28
PDCD4-203ENST00000444997 PRXQ9BXM0 1461 aa29.27■■■□□ 2.28
PDCD4-203ENST00000444997 UGGT2Q9NYU1 1516 aa29.26■■■□□ 2.27
PDCD4-203ENST00000444997 DISP1Q96F81 1524 aa29.25■■■□□ 2.27
PDCD4-203ENST00000444997 MAPKBP1O60336 1514 aa29.24■■■□□ 2.27
PDCD4-203ENST00000444997 CSRNP3Q8WYN3 585 aa29.23■■■□□ 2.27
PDCD4-203ENST00000444997 FAM69CQ0P6D2 419 aa29.22■■■□□ 2.27
PDCD4-203ENST00000444997 ABCC10Q5T3U5 1492 aa29.19■■■□□ 2.26
PDCD4-203ENST00000444997 UACAQ9BZF9 1416 aa29.17■■■□□ 2.26
PDCD4-203ENST00000444997 CTTNBP2Q8WZ74 1663 aa29.16■■■□□ 2.26
PDCD4-203ENST00000444997 EEA1Q15075 1411 aa29.16■■■□□ 2.26
PDCD4-203ENST00000444997 ABCC2Q92887 1545 aa29.15■■■□□ 2.26
PDCD4-203ENST00000444997 KIAA0556O60303 1618 aa29.14■■■□□ 2.26
PDCD4-203ENST00000444997 UHRF1BP1LA0JNW5 1464 aa29.14■■■□□ 2.26
PDCD4-203ENST00000444997 GOLGA3Q08378 1498 aa29.14■■■□□ 2.26
PDCD4-203ENST00000444997 KIF13AQ9H1H9 1805 aa29.13■■■□□ 2.25
PDCD4-203ENST00000444997 DIP2BQ9P265 1576 aa29.07■■■□□ 2.24
PDCD4-203ENST00000444997 FAM9AQ8IZU1 332 aaPredicted RBP29.05■■■□□ 2.24
PDCD4-203ENST00000444997 PLB1Q6P1J6 1458 aa29.03■■■□□ 2.24
PDCD4-203ENST00000444997 ASXL2Q76L83 1435 aa29.03■■■□□ 2.24
PDCD4-203ENST00000444997 KDM5BQ9UGL1 1544 aa28.99■■■□□ 2.23
PDCD4-203ENST00000444997 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
PDCD4-203ENST00000444997 P3H3Q8IVL6 736 aa28.93■■■□□ 2.22
PDCD4-203ENST00000444997 ZCCHC11Q5TAX3 1644 aaKnown RBP28.88■■■□□ 2.21
PDCD4-203ENST00000444997 ABCA8O94911 1581 aa28.86■■■□□ 2.21
PDCD4-203ENST00000444997 GLI2P10070 1586 aa28.86■■■□□ 2.21
PDCD4-203ENST00000444997 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
PDCD4-203ENST00000444997 TSPOAP1O95153 1857 aa28.83■■■□□ 2.2
PDCD4-203ENST00000444997 EPRSP07814 1512 aaKnown RBP28.82■■■□□ 2.2
PDCD4-203ENST00000444997 KIF21BO75037 1637 aa28.8■■■□□ 2.2
PDCD4-203ENST00000444997 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
PDCD4-203ENST00000444997 SAMD9Q5K651 1589 aa28.79■■■□□ 2.2
PDCD4-203ENST00000444997 KDM6BO15054 1643 aa28.76■■■□□ 2.2
PDCD4-203ENST00000444997 AEBP2Q6ZN18 517 aaPredicted RBP28.76■■■□□ 2.19
PDCD4-203ENST00000444997 UBTFP17480 764 aaKnown RBP28.73■■■□□ 2.19
PDCD4-203ENST00000444997 KCNH8Q96L42 1107 aa28.73■■■□□ 2.19
PDCD4-203ENST00000444997 ARID3CA6NKF2 412 aa28.72■■■□□ 2.19
PDCD4-203ENST00000444997 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
PDCD4-203ENST00000444997 TEX14Q8IWB6 1497 aa28.68■■■□□ 2.18
PDCD4-203ENST00000444997 MAP3K4Q9Y6R4 1608 aa28.68■■■□□ 2.18
PDCD4-203ENST00000444997 FHOD3Q2V2M9 1422 aa28.67■■■□□ 2.18
PDCD4-203ENST00000444997 ATP10BO94823 1461 aa28.66■■■□□ 2.18
PDCD4-203ENST00000444997 PPRC1Q5VV67 1664 aaKnown RBP28.64■■■□□ 2.18
PDCD4-203ENST00000444997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.64■■■□□ 2.18
PDCD4-203ENST00000444997 HNRNPUL2Q1KMD3 747 aaKnown RBP28.64■■■□□ 2.18
PDCD4-203ENST00000444997 EFCAB5A4FU69 1503 aa28.64■■■□□ 2.17
PDCD4-203ENST00000444997 RAPGEF6Q8TEU7 1601 aa28.63■■■□□ 2.17
PDCD4-203ENST00000444997 CD109Q6YHK3 1445 aa28.61■■■□□ 2.17
PDCD4-203ENST00000444997 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
PDCD4-203ENST00000444997 MAGI3Q5TCQ9 1506 aa28.53■■■□□ 2.16
PDCD4-203ENST00000444997 NUP153P49790 1475 aaKnown RBP28.53■■■□□ 2.16
PDCD4-203ENST00000444997 COL17A1Q9UMD9 1497 aaPredicted RBP28.49■■■□□ 2.15
PDCD4-203ENST00000444997 PLEKHD1A6NEE1 506 aa28.48■■■□□ 2.15
PDCD4-203ENST00000444997 FMN1Q68DA7 1419 aa28.43■■■□□ 2.14
PDCD4-203ENST00000444997 ATP1B4Q9UN42 357 aaPredicted RBP28.41■■■□□ 2.14
PDCD4-203ENST00000444997 ARHGAP35Q9NRY4 1499 aa28.4■■■□□ 2.14
PDCD4-203ENST00000444997 ABCA9Q8IUA7 1624 aa28.4■■■□□ 2.14
PDCD4-203ENST00000444997 PHLDB1Q86UU1 1377 aa28.37■■■□□ 2.13
PDCD4-203ENST00000444997 KDM4FA0A1W2PPD8 638 aa28.34■■■□□ 2.13
PDCD4-203ENST00000444997 ARAP3Q8WWN8 1544 aa28.3■■■□□ 2.12
PDCD4-203ENST00000444997 CDK11AQ9UQ88 783 aaPredicted RBP28.29■■■□□ 2.12
PDCD4-203ENST00000444997 HECW1Q76N89 1606 aa28.29■■■□□ 2.12
PDCD4-203ENST00000444997 CDK13Q14004 1512 aaKnown RBP28.28■■■□□ 2.12
PDCD4-203ENST00000444997 NEO1Q92859 1461 aa28.27■■■□□ 2.12
PDCD4-203ENST00000444997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.2■■■□□ 2.19e-7■■■□□ 17.5
PDCD4-203ENST00000444997 ADGRL1O94910 1474 aa28.2■■■□□ 2.1
PDCD4-203ENST00000444997 RAPGEF3O95398 923 aa28.18■■■□□ 2.1
PDCD4-203ENST00000444997 CLIP1P30622 1438 aa28.15■■■□□ 2.1
PDCD4-203ENST00000444997 FANCAO15360 1455 aa28.15■■■□□ 2.1
PDCD4-203ENST00000444997 TTC37Q6PGP7 1564 aa28.13■■■□□ 2.09
PDCD4-203ENST00000444997 AKNAQ7Z591 1439 aa28.13■■■□□ 2.09
PDCD4-203ENST00000444997 CASKIN1Q8WXD9 1431 aa28.12■■■□□ 2.09
PDCD4-203ENST00000444997 CFAP74Q9C0B2 1584 aa28.11■■■□□ 2.09
PDCD4-203ENST00000444997 TROQ12816 1431 aaPredicted RBP28.09■■■□□ 2.09
PDCD4-203ENST00000444997 DENND4BO75064 1496 aaPredicted RBP28.09■■■□□ 2.09
PDCD4-203ENST00000444997 PLCH2O75038 1416 aa28.09■■■□□ 2.09
PDCD4-203ENST00000444997 CCDC18Q5T9S5 1454 aa28.08■■■□□ 2.09
PDCD4-203ENST00000444997 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
PDCD4-203ENST00000444997 EFCAB2Q5VUJ9 269 aa28.04■■■□□ 2.08
PDCD4-203ENST00000444997 KIF14Q15058 1648 aa28.03■■■□□ 2.08
PDCD4-203ENST00000444997 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
PDCD4-203ENST00000444997 FRMPD1Q5SYB0 1578 aa28.01■■■□□ 2.07
PDCD4-203ENST00000444997 LRRIQ1Q96JM4 1722 aa27.98■■■□□ 2.07
PDCD4-203ENST00000444997 SCAPERQ9BY12 1400 aa27.97■■■□□ 2.07
PDCD4-203ENST00000444997 ARID4BQ4LE39 1312 aaPredicted RBP27.96■■■□□ 2.07
PDCD4-203ENST00000444997 MYO5CQ9NQX4 1742 aa27.95■■■□□ 2.07
PDCD4-203ENST00000444997 RICTORQ6R327 1708 aa27.93■■■□□ 2.06
PDCD4-203ENST00000444997 ARHGAP5Q13017 1502 aa27.92■■■□□ 2.06
PDCD4-203ENST00000444997 CEP162Q5TB80 1403 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms