RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 CUX1P39880 1505 aa27.36■■□□□ 1.97
SYNCRIP-203ENST00000444272 NPM1P06748 294 aaKnown RBP eCLIP27.35■■□□□ 1.97
SYNCRIP-203ENST00000444272 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
SYNCRIP-203ENST00000444272 PRG4Q92954 1404 aaPredicted RBP27.26■■□□□ 1.95
SYNCRIP-203ENST00000444272 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
SYNCRIP-203ENST00000444272 ADCY10Q96PN6 1610 aa27.2■■□□□ 1.95
SYNCRIP-203ENST00000444272 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
SYNCRIP-203ENST00000444272 SOCS7O14512 581 aa27.14■■□□□ 1.94
SYNCRIP-203ENST00000444272 ILDR2Q71H61 639 aa27.08■■□□□ 1.93
SYNCRIP-203ENST00000444272 JPH4Q96JJ6 628 aa27.08■■□□□ 1.93
SYNCRIP-203ENST00000444272 PPRC1Q5VV67 1664 aaKnown RBP27.06■■□□□ 1.92
SYNCRIP-203ENST00000444272 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
SYNCRIP-203ENST00000444272 COL17A1Q9UMD9 1497 aaPredicted RBP26.97■■□□□ 1.91
SYNCRIP-203ENST00000444272 TOP2BQ02880 1626 aa26.95■■□□□ 1.91
SYNCRIP-203ENST00000444272 DISP3Q9P2K9 1392 aa26.92■■□□□ 1.9
SYNCRIP-203ENST00000444272 RUSC2Q8N2Y8 1516 aa26.91■■□□□ 1.9
SYNCRIP-203ENST00000444272 GLI2P10070 1586 aa26.86■■□□□ 1.89
SYNCRIP-203ENST00000444272 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
SYNCRIP-203ENST00000444272 ASXL2Q76L83 1435 aa26.77■■□□□ 1.88
SYNCRIP-203ENST00000444272 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
SYNCRIP-203ENST00000444272 PLB1Q6P1J6 1458 aa26.74■■□□□ 1.87
SYNCRIP-203ENST00000444272 MAP3K4Q9Y6R4 1608 aa26.71■■□□□ 1.87
SYNCRIP-203ENST00000444272 TEX14Q8IWB6 1497 aa26.7■■□□□ 1.87
SYNCRIP-203ENST00000444272 ABCC2Q92887 1545 aa26.7■■□□□ 1.86
SYNCRIP-203ENST00000444272 CUL7Q14999 1698 aa26.66■■□□□ 1.86
SYNCRIP-203ENST00000444272 KIF21BO75037 1637 aa26.63■■□□□ 1.85
SYNCRIP-203ENST00000444272 TTBK1Q5TCY1 1321 aaPredicted RBP26.63■■□□□ 1.85
SYNCRIP-203ENST00000444272 PTPRGP23470 1445 aa26.61■■□□□ 1.85
SYNCRIP-203ENST00000444272 EPRSP07814 1512 aaKnown RBP26.6■■□□□ 1.85
SYNCRIP-203ENST00000444272 SPATA31D1Q6ZQQ2 1576 aa26.59■■□□□ 1.85
SYNCRIP-203ENST00000444272 PCF11O94913 1555 aaKnown RBP26.57■■□□□ 1.84
SYNCRIP-203ENST00000444272 PTPRMP28827 1452 aa26.55■■□□□ 1.84
SYNCRIP-203ENST00000444272 CERKQ8TCT0 537 aa26.55■■□□□ 1.84
SYNCRIP-203ENST00000444272 KIAA0586Q9BVV6 1533 aa26.54■■□□□ 1.84
SYNCRIP-203ENST00000444272 BIVM-ERCC5R4GMW8 1640 aa26.51■■□□□ 1.83
SYNCRIP-203ENST00000444272 ADAMTSL3P82987 1691 aa26.45■■□□□ 1.82
SYNCRIP-203ENST00000444272 UHRF1BP1LA0JNW5 1464 aa26.43■■□□□ 1.82
SYNCRIP-203ENST00000444272 TNIKQ9UKE5 1360 aa26.42■■□□□ 1.82
SYNCRIP-203ENST00000444272 UACAQ9BZF9 1416 aa26.36■■□□□ 1.81
SYNCRIP-203ENST00000444272 ZCCHC11Q5TAX3 1644 aaKnown RBP26.36■■□□□ 1.81
SYNCRIP-203ENST00000444272 KDM5BQ9UGL1 1544 aa26.35■■□□□ 1.81
SYNCRIP-203ENST00000444272 CARMIL2Q6F5E8 1435 aa26.33■■□□□ 1.81
SYNCRIP-203ENST00000444272 HSPA2P54652 639 aa26.33■■□□□ 1.81
SYNCRIP-203ENST00000444272 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
SYNCRIP-203ENST00000444272 MAGI3Q5TCQ9 1506 aa26.29■■□□□ 1.8
SYNCRIP-203ENST00000444272 CD109Q6YHK3 1445 aa26.25■■□□□ 1.79
SYNCRIP-203ENST00000444272 BCORL1Q5H9F3 1711 aa26.25■■□□□ 1.79
SYNCRIP-203ENST00000444272 CFAP43Q8NDM7 1665 aa26.25■■□□□ 1.79
SYNCRIP-203ENST00000444272 WDR7Q9Y4E6 1490 aa26.24■■□□□ 1.79
SYNCRIP-203ENST00000444272 RIMS1Q86UR5 1692 aaKnown RBP26.16■■□□□ 1.78
SYNCRIP-203ENST00000444272 ARAP3Q8WWN8 1544 aa26.13■■□□□ 1.77
SYNCRIP-203ENST00000444272 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
SYNCRIP-203ENST00000444272 ARID4BQ4LE39 1312 aaPredicted RBP26.1■■□□□ 1.77
SYNCRIP-203ENST00000444272 DISP1Q96F81 1524 aa26.09■■□□□ 1.77
SYNCRIP-203ENST00000444272 KCNH8Q96L42 1107 aa26.09■■□□□ 1.77
SYNCRIP-203ENST00000444272 IGF1RP08069 1367 aa26.08■■□□□ 1.77
SYNCRIP-203ENST00000444272 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
SYNCRIP-203ENST00000444272 RAPGEF3O95398 923 aa25.96■■□□□ 1.75
SYNCRIP-203ENST00000444272 KIAA0556O60303 1618 aa25.9■■□□□ 1.74
SYNCRIP-203ENST00000444272 KIF27Q86VH2 1401 aa25.89■■□□□ 1.74
SYNCRIP-203ENST00000444272 CARMIL1Q5VZK9 1371 aa25.88■■□□□ 1.73
SYNCRIP-203ENST00000444272 FRMPD1Q5SYB0 1578 aa25.87■■□□□ 1.73
SYNCRIP-203ENST00000444272 STRCQ7RTU9 1775 aa25.86■■□□□ 1.73
SYNCRIP-203ENST00000444272 YEATS2Q9ULM3 1422 aa25.86■■□□□ 1.73
SYNCRIP-203ENST00000444272 PHLDB1Q86UU1 1377 aa25.84■■□□□ 1.73
SYNCRIP-203ENST00000444272 UGGT2Q9NYU1 1516 aa25.84■■□□□ 1.73
SYNCRIP-203ENST00000444272 DMRT2Q9Y5R5 561 aa25.84■■□□□ 1.73
SYNCRIP-203ENST00000444272 ARHGEF40Q8TER5 1519 aa25.83■■□□□ 1.72
SYNCRIP-203ENST00000444272 PREX1Q8TCU6 1659 aa25.8■■□□□ 1.72
SYNCRIP-203ENST00000444272 FER1L4A9Z1Z3 1794 aa25.76■■□□□ 1.71
SYNCRIP-203ENST00000444272 POGZQ7Z3K3 1410 aa25.75■■□□□ 1.71
SYNCRIP-203ENST00000444272 ABCA8O94911 1581 aa25.74■■□□□ 1.71
SYNCRIP-203ENST00000444272 TTC37Q6PGP7 1564 aa25.74■■□□□ 1.71
SYNCRIP-203ENST00000444272 NEO1Q92859 1461 aa25.74■■□□□ 1.71
SYNCRIP-203ENST00000444272 ABCA9Q8IUA7 1624 aa25.74■■□□□ 1.71
SYNCRIP-203ENST00000444272 LTBP4Q8N2S1 1624 aa25.73■■□□□ 1.71
SYNCRIP-203ENST00000444272 FANCAO15360 1455 aa25.72■■□□□ 1.71
SYNCRIP-203ENST00000444272 IQSEC2Q5JU85 1478 aa25.72■■□□□ 1.71
SYNCRIP-203ENST00000444272 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
SYNCRIP-203ENST00000444272 MLECQ14165 292 aa25.67■■□□□ 1.7
SYNCRIP-203ENST00000444272 PTPRTO14522 1441 aa25.65■■□□□ 1.7
SYNCRIP-203ENST00000444272 MED1Q15648 1581 aaPredicted RBP25.65■■□□□ 1.7
SYNCRIP-203ENST00000444272 RICTORQ6R327 1708 aa25.63■■□□□ 1.69
SYNCRIP-203ENST00000444272 AKNAQ7Z591 1439 aa25.62■■□□□ 1.69
SYNCRIP-203ENST00000444272 ARID3CA6NKF2 412 aa25.61■■□□□ 1.69
SYNCRIP-203ENST00000444272 UHRF1BP1Q6BDS2 1440 aa25.57■■□□□ 1.68
SYNCRIP-203ENST00000444272 DENND4BO75064 1496 aaPredicted RBP25.57■■□□□ 1.68
SYNCRIP-203ENST00000444272 UBAP1LF5GYI3 381 aa25.56■■□□□ 1.68
SYNCRIP-203ENST00000444272 CEBPAP49715 358 aaPredicted RBP25.56■■□□□ 1.68
SYNCRIP-203ENST00000444272 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
SYNCRIP-203ENST00000444272 ATP10BO94823 1461 aa25.51■■□□□ 1.67
SYNCRIP-203ENST00000444272 EFCAB5A4FU69 1503 aa25.51■■□□□ 1.67
SYNCRIP-203ENST00000444272 FHOD3Q2V2M9 1422 aa25.5■■□□□ 1.67
SYNCRIP-203ENST00000444272 ARHGEF12Q9NZN5 1544 aa25.5■■□□□ 1.67
SYNCRIP-203ENST00000444272 ZMYM4Q5VZL5 1548 aa25.48■■□□□ 1.67
SYNCRIP-203ENST00000444272 GOLGA3Q08378 1498 aa25.48■■□□□ 1.67
SYNCRIP-203ENST00000444272 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
SYNCRIP-203ENST00000444272 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
SYNCRIP-203ENST00000444272 SETD1BQ9UPS6 1966 aaKnown RBP25.44■■□□□ 1.66
SYNCRIP-203ENST00000444272 CTTNBP2Q8WZ74 1663 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms