RNA–Protein interactions for RNA: ENST00000443875.5

C1S-208, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 2,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-208ENST00000443875 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
C1S-208ENST00000443875 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
C1S-208ENST00000443875 PRXQ9BXM0 1461 aa13.39□□□□□ -0.27
C1S-208ENST00000443875 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
C1S-208ENST00000443875 SETD5Q9C0A6 1442 aa13.38□□□□□ -0.27
C1S-208ENST00000443875 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
C1S-208ENST00000443875 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
C1S-208ENST00000443875 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
C1S-208ENST00000443875 NOP58Q9Y2X3 529 aaKnown RBP13.35□□□□□ -0.27
C1S-208ENST00000443875 TOP2BQ02880 1626 aa13.34□□□□□ -0.27
C1S-208ENST00000443875 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
C1S-208ENST00000443875 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
C1S-208ENST00000443875 NBR1Q14596 966 aa13.31□□□□□ -0.28
C1S-208ENST00000443875 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
C1S-208ENST00000443875 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
C1S-208ENST00000443875 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
C1S-208ENST00000443875 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
C1S-208ENST00000443875 UNC13AQ9UPW8 1703 aa13.29□□□□□ -0.28
C1S-208ENST00000443875 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
C1S-208ENST00000443875 TIAM1Q13009 1591 aa13.27□□□□□ -0.28
C1S-208ENST00000443875 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
C1S-208ENST00000443875 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
C1S-208ENST00000443875 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
C1S-208ENST00000443875 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
C1S-208ENST00000443875 LRRC9Q6ZRR7 1453 aa13.21□□□□□ -0.3
C1S-208ENST00000443875 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
C1S-208ENST00000443875 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
C1S-208ENST00000443875 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
C1S-208ENST00000443875 FHAD1B1AJZ9 1412 aa13.18□□□□□ -0.3
C1S-208ENST00000443875 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
C1S-208ENST00000443875 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
C1S-208ENST00000443875 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
C1S-208ENST00000443875 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
C1S-208ENST00000443875 ZBED9Q6R2W3 1325 aa13.15□□□□□ -0.31
C1S-208ENST00000443875 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
C1S-208ENST00000443875 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
C1S-208ENST00000443875 WASHC2AQ641Q2 1341 aa13.14□□□□□ -0.31
C1S-208ENST00000443875 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
C1S-208ENST00000443875 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
C1S-208ENST00000443875 NCOA2Q15596 1464 aa13.13□□□□□ -0.31
C1S-208ENST00000443875 CCDC184Q52MB2 194 aa13.13□□□□□ -0.31
C1S-208ENST00000443875 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
C1S-208ENST00000443875 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
C1S-208ENST00000443875 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
C1S-208ENST00000443875 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
C1S-208ENST00000443875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.1□□□□□ -0.31
C1S-208ENST00000443875 CUX1P39880 1505 aa13.09□□□□□ -0.31
C1S-208ENST00000443875 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.31
C1S-208ENST00000443875 UACAQ9BZF9 1416 aa13.08□□□□□ -0.32
C1S-208ENST00000443875 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
C1S-208ENST00000443875 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
C1S-208ENST00000443875 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
C1S-208ENST00000443875 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
C1S-208ENST00000443875 C11orf95C9JLR9 678 aaPredicted RBP13.06□□□□□ -0.32
C1S-208ENST00000443875 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
C1S-208ENST00000443875 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
C1S-208ENST00000443875 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
C1S-208ENST00000443875 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
C1S-208ENST00000443875 RNF123Q5XPI4 1314 aa13.04□□□□□ -0.32
C1S-208ENST00000443875 WASHC2CQ9Y4E1 1318 aa13.04□□□□□ -0.32
C1S-208ENST00000443875 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
C1S-208ENST00000443875 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
C1S-208ENST00000443875 PTPN23Q9H3S7 1636 aa13.03□□□□□ -0.32
C1S-208ENST00000443875 HFM1A2PYH4 1435 aa13.02□□□□□ -0.32
C1S-208ENST00000443875 NEFMP07197 916 aa13□□□□□ -0.33
C1S-208ENST00000443875 NCOA1Q15788 1441 aa13□□□□□ -0.33
C1S-208ENST00000443875 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
C1S-208ENST00000443875 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
C1S-208ENST00000443875 FGD6Q6ZV73 1430 aa12.99□□□□□ -0.33
C1S-208ENST00000443875 CCDC7Q96M83 1385 aa12.99□□□□□ -0.33
C1S-208ENST00000443875 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
C1S-208ENST00000443875 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
C1S-208ENST00000443875 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
C1S-208ENST00000443875 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
C1S-208ENST00000443875 NAIPQ13075 1403 aa12.96□□□□□ -0.33
C1S-208ENST00000443875 IGF1RP08069 1367 aa12.96□□□□□ -0.33
C1S-208ENST00000443875 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.33
C1S-208ENST00000443875 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
C1S-208ENST00000443875 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
C1S-208ENST00000443875 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
C1S-208ENST00000443875 BRPF3Q9ULD4 1205 aa12.93□□□□□ -0.34
C1S-208ENST00000443875 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
C1S-208ENST00000443875 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
C1S-208ENST00000443875 CARMIL1Q5VZK9 1371 aa12.92□□□□□ -0.34
C1S-208ENST00000443875 CASKIN1Q8WXD9 1431 aa12.91□□□□□ -0.34
C1S-208ENST00000443875 TCERG1O14776 1098 aaKnown RBP12.91□□□□□ -0.34
C1S-208ENST00000443875 ATP1B4Q9UN42 357 aaPredicted RBP12.91□□□□□ -0.34
C1S-208ENST00000443875 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
C1S-208ENST00000443875 DENND4BO75064 1496 aaPredicted RBP12.9□□□□□ -0.35
C1S-208ENST00000443875 FGD5Q6ZNL6 1462 aa12.9□□□□□ -0.35
C1S-208ENST00000443875 PDE4AP27815 886 aa12.89□□□□□ -0.35
C1S-208ENST00000443875 FHOD3Q2V2M9 1422 aa12.89□□□□□ -0.35
C1S-208ENST00000443875 GSE1Q14687 1217 aa12.88□□□□□ -0.35
C1S-208ENST00000443875 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
C1S-208ENST00000443875 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
C1S-208ENST00000443875 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
C1S-208ENST00000443875 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
C1S-208ENST00000443875 EFCAB5A4FU69 1503 aa12.86□□□□□ -0.35
C1S-208ENST00000443875 MS4A1P11836 297 aa12.86□□□□□ -0.35
C1S-208ENST00000443875 GCC2Q8IWJ2 1684 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms