RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 ZBTB47Q9UFB7 747 aaPredicted RBP13.94□□□□□ -0.18
EPHA4-209ENST00000443796 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
EPHA4-209ENST00000443796 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
EPHA4-209ENST00000443796 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
EPHA4-209ENST00000443796 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
EPHA4-209ENST00000443796 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
EPHA4-209ENST00000443796 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
EPHA4-209ENST00000443796 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
EPHA4-209ENST00000443796 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
EPHA4-209ENST00000443796 HMGXB3Q12766 1538 aa13.81□□□□□ -0.2
EPHA4-209ENST00000443796 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
EPHA4-209ENST00000443796 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
EPHA4-209ENST00000443796 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
EPHA4-209ENST00000443796 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
EPHA4-209ENST00000443796 SMARCA2P51531 1590 aa13.77□□□□□ -0.21
EPHA4-209ENST00000443796 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
EPHA4-209ENST00000443796 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
EPHA4-209ENST00000443796 SMARCA4P51532 1647 aa13.71□□□□□ -0.22
EPHA4-209ENST00000443796 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
EPHA4-209ENST00000443796 NUBP1P53384 320 aa13.69□□□□□ -0.22
EPHA4-209ENST00000443796 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
EPHA4-209ENST00000443796 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
EPHA4-209ENST00000443796 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
EPHA4-209ENST00000443796 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
EPHA4-209ENST00000443796 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
EPHA4-209ENST00000443796 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
EPHA4-209ENST00000443796 GSE1Q14687 1217 aa13.61□□□□□ -0.23
EPHA4-209ENST00000443796 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
EPHA4-209ENST00000443796 MRC2Q9UBG0 1479 aa13.59□□□□□ -0.23
EPHA4-209ENST00000443796 PKD2Q13563 968 aa13.58□□□□□ -0.24
EPHA4-209ENST00000443796 WDR62O43379 1518 aa13.58□□□□□ -0.24
EPHA4-209ENST00000443796 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.24
EPHA4-209ENST00000443796 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
EPHA4-209ENST00000443796 ECM2O94769 699 aaPredicted RBP13.54□□□□□ -0.24
EPHA4-209ENST00000443796 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
EPHA4-209ENST00000443796 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
EPHA4-209ENST00000443796 RIMBP3CA6NJZ7 1639 aa13.49□□□□□ -0.25
EPHA4-209ENST00000443796 RIMBP3BA6NNM3 1639 aa13.49□□□□□ -0.25
EPHA4-209ENST00000443796 RIMBP3Q9UFD9 1639 aa13.49□□□□□ -0.25
EPHA4-209ENST00000443796 HAX1O00165 279 aa13.47□□□□□ -0.25
EPHA4-209ENST00000443796 POTEHQ6S545 545 aa13.47□□□□□ -0.25
EPHA4-209ENST00000443796 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
EPHA4-209ENST00000443796 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
EPHA4-209ENST00000443796 PYGBP11216 843 aa13.44□□□□□ -0.26
EPHA4-209ENST00000443796 C19orf67A6NJJ6 358 aa13.43□□□□□ -0.26
EPHA4-209ENST00000443796 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
EPHA4-209ENST00000443796 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
EPHA4-209ENST00000443796 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
EPHA4-209ENST00000443796 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
EPHA4-209ENST00000443796 RGL2O15211 777 aa13.37□□□□□ -0.27
EPHA4-209ENST00000443796 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
EPHA4-209ENST00000443796 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
EPHA4-209ENST00000443796 CYB5RLQ6IPT4 315 aa13.32□□□□□ -0.28
EPHA4-209ENST00000443796 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
EPHA4-209ENST00000443796 EVX2Q03828 476 aa13.3□□□□□ -0.28
EPHA4-209ENST00000443796 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
EPHA4-209ENST00000443796 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
EPHA4-209ENST00000443796 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
EPHA4-209ENST00000443796 MAP3K13O43283 966 aa13.27□□□□□ -0.29
EPHA4-209ENST00000443796 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
EPHA4-209ENST00000443796 PCDHB13Q9Y5F0 798 aa13.27□□□□□ -0.29
EPHA4-209ENST00000443796 CFTRP13569 1480 aa13.26□□□□□ -0.29
EPHA4-209ENST00000443796 WIZO95785 1651 aa13.25□□□□□ -0.29
EPHA4-209ENST00000443796 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
EPHA4-209ENST00000443796 ZNF467Q7Z7K2 595 aaPredicted RBP13.24□□□□□ -0.29
EPHA4-209ENST00000443796 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
EPHA4-209ENST00000443796 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
EPHA4-209ENST00000443796 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
EPHA4-209ENST00000443796 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
EPHA4-209ENST00000443796 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
EPHA4-209ENST00000443796 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
EPHA4-209ENST00000443796 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
EPHA4-209ENST00000443796 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
EPHA4-209ENST00000443796 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
EPHA4-209ENST00000443796 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
EPHA4-209ENST00000443796 CHD1O14646 1710 aa13.13□□□□□ -0.31
EPHA4-209ENST00000443796 EIF4G3O43432 1585 aaKnown RBP13.12□□□□□ -0.31
EPHA4-209ENST00000443796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
EPHA4-209ENST00000443796 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
EPHA4-209ENST00000443796 STK25O00506 426 aa13.11□□□□□ -0.31
EPHA4-209ENST00000443796 PSEN1P49768 467 aa13.11□□□□□ -0.31
EPHA4-209ENST00000443796 CLCN6P51797 869 aa13.11□□□□□ -0.31
EPHA4-209ENST00000443796 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
EPHA4-209ENST00000443796 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
EPHA4-209ENST00000443796 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
EPHA4-209ENST00000443796 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
EPHA4-209ENST00000443796 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
EPHA4-209ENST00000443796 PRDM2Q13029 1718 aa13.06□□□□□ -0.32
EPHA4-209ENST00000443796 GABBR2O75899 941 aa13.06□□□□□ -0.32
EPHA4-209ENST00000443796 HS6ST3Q8IZP7 471 aa13.06□□□□□ -0.32
EPHA4-209ENST00000443796 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
EPHA4-209ENST00000443796 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
EPHA4-209ENST00000443796 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
EPHA4-209ENST00000443796 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
EPHA4-209ENST00000443796 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
EPHA4-209ENST00000443796 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
EPHA4-209ENST00000443796 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
EPHA4-209ENST00000443796 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
EPHA4-209ENST00000443796 TIE1P35590 1138 aa12.98□□□□□ -0.33
EPHA4-209ENST00000443796 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms