RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 CARMIL1Q5VZK9 1371 aa34.96■■■■□ 3.19
UBE2D4-205ENST00000443780 PRG4Q92954 1404 aaPredicted RBP34.94■■■■□ 3.18
UBE2D4-205ENST00000443780 KIAA0586Q9BVV6 1533 aa34.89■■■■□ 3.18
UBE2D4-205ENST00000443780 TRHP20396 242 aaPredicted RBP34.85■■■■□ 3.17
UBE2D4-205ENST00000443780 RAPGEF2Q9Y4G8 1499 aa34.71■■■■□ 3.15
UBE2D4-205ENST00000443780 IQGAP2Q13576 1575 aa34.65■■■■□ 3.14
UBE2D4-205ENST00000443780 CARMIL2Q6F5E8 1435 aa34.52■■■■□ 3.12
UBE2D4-205ENST00000443780 ADCY10Q96PN6 1610 aa34.5■■■■□ 3.11
UBE2D4-205ENST00000443780 CTTNBP2Q8WZ74 1663 aa34.48■■■■□ 3.11
UBE2D4-205ENST00000443780 PRXQ9BXM0 1461 aa34.48■■■■□ 3.11
UBE2D4-205ENST00000443780 PTPRGP23470 1445 aa34.46■■■■□ 3.11
UBE2D4-205ENST00000443780 UGGT2Q9NYU1 1516 aa34.45■■■■□ 3.1
UBE2D4-205ENST00000443780 TNIKQ9UKE5 1360 aa34.44■■■■□ 3.1
UBE2D4-205ENST00000443780 DISP1Q96F81 1524 aa34.43■■■■□ 3.1
UBE2D4-205ENST00000443780 NPM1P06748 294 aaKnown RBP eCLIP34.41■■■■□ 3.1
UBE2D4-205ENST00000443780 KIF13AQ9H1H9 1805 aa34.4■■■■□ 3.1
UBE2D4-205ENST00000443780 TTBK1Q5TCY1 1321 aaPredicted RBP34.37■■■■□ 3.09
UBE2D4-205ENST00000443780 CSRNP3Q8WYN3 585 aa34.34■■■■□ 3.09
UBE2D4-205ENST00000443780 MAPKBP1O60336 1514 aa34.34■■■■□ 3.09
UBE2D4-205ENST00000443780 KIAA0556O60303 1618 aa34.33■■■■□ 3.09
UBE2D4-205ENST00000443780 EEA1Q15075 1411 aa34.3■■■■□ 3.08
UBE2D4-205ENST00000443780 ABCC10Q5T3U5 1492 aa34.23■■■■□ 3.07
UBE2D4-205ENST00000443780 UHRF1BP1LA0JNW5 1464 aa34.22■■■■□ 3.07
UBE2D4-205ENST00000443780 UACAQ9BZF9 1416 aa34.21■■■■□ 3.07
UBE2D4-205ENST00000443780 ABCC2Q92887 1545 aa34.21■■■■□ 3.07
UBE2D4-205ENST00000443780 GOLGA3Q08378 1498 aa34.2■■■■□ 3.07
UBE2D4-205ENST00000443780 DIP2BQ9P265 1576 aa34.19■■■■□ 3.06
UBE2D4-205ENST00000443780 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
UBE2D4-205ENST00000443780 FAM69CQ0P6D2 419 aa34.16■■■■□ 3.06
UBE2D4-205ENST00000443780 FAM9AQ8IZU1 332 aaPredicted RBP34.14■■■■□ 3.06
UBE2D4-205ENST00000443780 KDM5BQ9UGL1 1544 aa34.06■■■■□ 3.04
UBE2D4-205ENST00000443780 ASXL2Q76L83 1435 aa34.04■■■■□ 3.04
UBE2D4-205ENST00000443780 PLB1Q6P1J6 1458 aa34.02■■■■□ 3.04
UBE2D4-205ENST00000443780 KIF21BO75037 1637 aa34.02■■■■□ 3.04
UBE2D4-205ENST00000443780 ZCCHC11Q5TAX3 1644 aaKnown RBP34.02■■■■□ 3.04
UBE2D4-205ENST00000443780 TSPOAP1O95153 1857 aa34.01■■■■□ 3.04
UBE2D4-205ENST00000443780 ABCA8O94911 1581 aa33.98■■■■□ 3.03
UBE2D4-205ENST00000443780 SAMD9Q5K651 1589 aa33.97■■■■□ 3.03
UBE2D4-205ENST00000443780 P3H3Q8IVL6 736 aa33.93■■■■□ 3.02
UBE2D4-205ENST00000443780 GLI2P10070 1586 aa33.91■■■■□ 3.02
UBE2D4-205ENST00000443780 EPRSP07814 1512 aaKnown RBP33.84■■■■□ 3.01
UBE2D4-205ENST00000443780 RANGAP1P46060 587 aaPredicted RBP33.81■■■■□ 3
UBE2D4-205ENST00000443780 WDR7Q9Y4E6 1490 aa33.8■■■■□ 3
UBE2D4-205ENST00000443780 PPRC1Q5VV67 1664 aaKnown RBP33.8■■■■□ 3
UBE2D4-205ENST00000443780 MAP3K4Q9Y6R4 1608 aa33.77■■■■□ 3
UBE2D4-205ENST00000443780 KDM6BO15054 1643 aa33.75■■■□□ 2.99
UBE2D4-205ENST00000443780 RAPGEF6Q8TEU7 1601 aa33.73■■■□□ 2.99
UBE2D4-205ENST00000443780 EHMT2Q96KQ7 1210 aa33.72■■■□□ 2.99
UBE2D4-205ENST00000443780 FHOD3Q2V2M9 1422 aa33.71■■■□□ 2.99
UBE2D4-205ENST00000443780 EFCAB5A4FU69 1503 aa33.71■■■□□ 2.99
UBE2D4-205ENST00000443780 UBTFP17480 764 aaKnown RBP33.71■■■□□ 2.99
UBE2D4-205ENST00000443780 ATP10BO94823 1461 aa33.69■■■□□ 2.98
UBE2D4-205ENST00000443780 ARID3CA6NKF2 412 aa33.66■■■□□ 2.98
UBE2D4-205ENST00000443780 KCNH8Q96L42 1107 aa33.63■■■□□ 2.97
UBE2D4-205ENST00000443780 CFAP43Q8NDM7 1665 aa33.61■■■□□ 2.97
UBE2D4-205ENST00000443780 TEX14Q8IWB6 1497 aa33.59■■■□□ 2.97
UBE2D4-205ENST00000443780 NUP153P49790 1475 aaKnown RBP33.58■■■□□ 2.97
UBE2D4-205ENST00000443780 CD109Q6YHK3 1445 aa33.53■■■□□ 2.96
UBE2D4-205ENST00000443780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.5■■■□□ 2.95
UBE2D4-205ENST00000443780 HNRNPUL2Q1KMD3 747 aaKnown RBP33.5■■■□□ 2.95
UBE2D4-205ENST00000443780 MAGI3Q5TCQ9 1506 aa33.49■■■□□ 2.95
UBE2D4-205ENST00000443780 ARHGAP35Q9NRY4 1499 aa33.49■■■□□ 2.95
UBE2D4-205ENST00000443780 COL17A1Q9UMD9 1497 aaPredicted RBP33.47■■■□□ 2.95
UBE2D4-205ENST00000443780 ABCA9Q8IUA7 1624 aa33.44■■■□□ 2.94
UBE2D4-205ENST00000443780 AEBP2Q6ZN18 517 aaPredicted RBP33.4■■■□□ 2.94
UBE2D4-205ENST00000443780 FMN1Q68DA7 1419 aa33.39■■■□□ 2.94
UBE2D4-205ENST00000443780 PLEKHD1A6NEE1 506 aa33.35■■■□□ 2.93
UBE2D4-205ENST00000443780 HECW1Q76N89 1606 aa33.31■■■□□ 2.92
UBE2D4-205ENST00000443780 CDK13Q14004 1512 aaKnown RBP33.31■■■□□ 2.92
UBE2D4-205ENST00000443780 ATP1B4Q9UN42 357 aaPredicted RBP33.26■■■□□ 2.91
UBE2D4-205ENST00000443780 ARAP3Q8WWN8 1544 aa33.23■■■□□ 2.91
UBE2D4-205ENST00000443780 PHLDB1Q86UU1 1377 aa33.21■■■□□ 2.91
UBE2D4-205ENST00000443780 LRRIQ1Q96JM4 1722 aa33.19■■■□□ 2.9
UBE2D4-205ENST00000443780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.19■■■□□ 2.9
UBE2D4-205ENST00000443780 NEO1Q92859 1461 aa33.18■■■□□ 2.9
UBE2D4-205ENST00000443780 KDM4FA0A1W2PPD8 638 aa33.16■■■□□ 2.9
UBE2D4-205ENST00000443780 TTC37Q6PGP7 1564 aa33.15■■■□□ 2.9
UBE2D4-205ENST00000443780 CLIP1P30622 1438 aa33.13■■■□□ 2.89
UBE2D4-205ENST00000443780 CDK11AQ9UQ88 783 aaPredicted RBP33.11■■■□□ 2.89
UBE2D4-205ENST00000443780 PCF11O94913 1555 aaKnown RBP33.11■■■□□ 2.89
UBE2D4-205ENST00000443780 CASKIN1Q8WXD9 1431 aa33.1■■■□□ 2.89
UBE2D4-205ENST00000443780 CFAP74Q9C0B2 1584 aa33.05■■■□□ 2.88
UBE2D4-205ENST00000443780 FANCAO15360 1455 aa33.04■■■□□ 2.88
UBE2D4-205ENST00000443780 ADGRL1O94910 1474 aa33.03■■■□□ 2.88
UBE2D4-205ENST00000443780 RAPGEF3O95398 923 aa33.02■■■□□ 2.88
UBE2D4-205ENST00000443780 KIF14Q15058 1648 aa33.02■■■□□ 2.88
UBE2D4-205ENST00000443780 TROQ12816 1431 aaPredicted RBP33.02■■■□□ 2.88
UBE2D4-205ENST00000443780 AKNAQ7Z591 1439 aa33.01■■■□□ 2.87
UBE2D4-205ENST00000443780 CCDC18Q5T9S5 1454 aa33■■■□□ 2.87
UBE2D4-205ENST00000443780 MYO5CQ9NQX4 1742 aa33■■■□□ 2.87
UBE2D4-205ENST00000443780 FYCO1Q9BQS8 1478 aa32.99■■■□□ 2.87
UBE2D4-205ENST00000443780 FRMPD1Q5SYB0 1578 aa32.99■■■□□ 2.87
UBE2D4-205ENST00000443780 PLCH2O75038 1416 aa32.97■■■□□ 2.87
UBE2D4-205ENST00000443780 RICTORQ6R327 1708 aa32.96■■■□□ 2.87
UBE2D4-205ENST00000443780 DENND4BO75064 1496 aaPredicted RBP32.93■■■□□ 2.86
UBE2D4-205ENST00000443780 CEP162Q5TB80 1403 aa32.87■■■□□ 2.85
UBE2D4-205ENST00000443780 EFCAB2Q5VUJ9 269 aa32.85■■■□□ 2.85
UBE2D4-205ENST00000443780 CDC42BPBQ9Y5S2 1711 aa32.82■■■□□ 2.85
UBE2D4-205ENST00000443780 SCAPERQ9BY12 1400 aa32.81■■■□□ 2.84
UBE2D4-205ENST00000443780 ARHGAP5Q13017 1502 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms